; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002921 (gene) of Chayote v1 genome

Gene IDSed0002921
OrganismSechium edule (Chayote v1)
Descriptiontrafficking protein particle complex subunit 6B
Genome locationLG04:44819372..44824641
RNA-Seq ExpressionSed0002921
SyntenySed0002921
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0043087 - regulation of GTPase activity (biological process)
GO:0005801 - cis-Golgi network (cellular component)
GO:0005802 - trans-Golgi network (cellular component)
GO:0030008 - TRAPP complex (cellular component)
InterPro domainsIPR007194 - Transport protein particle (TRAPP) component
IPR024096 - NO signalling/Golgi transport ligand-binding domain superfamily
IPR037992 - TRAPP complex, Trs33 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023966.1 Trafficking protein particle complex subunit 6B, partial [Cucurbita argyrosperma subsp. argyrosperma]1.7e-9096.49Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVDPPQ E Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

XP_022154611.1 trafficking protein particle complex subunit 6B [Momordica charantia]4.2e-8995.35Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDP QSE Q+ SADGE+K++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

XP_022961590.1 trafficking protein particle complex subunit 6B [Cucurbita moschata]1.7e-9096.49Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVDPPQ E Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

XP_023545328.1 trafficking protein particle complex subunit 6B [Cucurbita pepo subsp. pepo]3.8e-9096.49Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVDPPQ E Q+ SADGENK +QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

XP_038878648.1 trafficking protein particle complex subunit 6B [Benincasa hispida]1.2e-8895.93Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVD PQSE Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

TrEMBL top hitse value%identityAlignment
A0A1S3BP90 trafficking protein particle complex subunit 6B isoform X22.9e-8894.77Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVD PQ+E Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A5D3CG65 Trafficking protein particle complex subunit 6B isoform X22.9e-8894.77Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVDSLLTEMVSTYC+RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVD PQ+E Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A6J1DP88 trafficking protein particle complex subunit 6B2.0e-8995.35Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        M REVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWLTRMSVDP QSE Q+ SADGE+K++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA

A0A6J1HCN4 trafficking protein particle complex subunit 6B8.2e-9196.49Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVDPPQ E Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

A0A6J1I0Q5 trafficking protein particle complex subunit 6B8.2e-9196.49Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        RWLTRMSVDPPQ E Q+ SADGENK++QATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
Subjt:  RWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

SwissProt top hitse value%identityAlignment
F1QMV3 Trafficking protein particle complex subunit 6b5.4e-3147.79Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY
        ++E +G++VG  L ER+T + PRF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT++S              G+     A    L 
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY

Query:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        F CG++RGALSN+G+   V+A++S +PAC F V I+
Subjt:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q32L78 Trafficking protein particle complex subunit 6B2.4e-3149.26Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS      E                S +L 
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY

Query:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        F CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q78XR0 Trafficking protein particle complex subunit 6A1.1e-2340.74Show/hide
Query:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYF
        +E +G++VG  L ER  +E P F + L+A+KF+C+D W+ +F+K +D L+TNH+GT+VLQDN F  L  M      S PQ +         +     L F
Subjt:  IEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLYF

Query:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
         CG++ GAL  LG    V+A +++LPAC F V I+
Subjt:  PCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q86SZ2 Trafficking protein particle complex subunit 6B2.4e-3149.26Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY
        ++E +G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR LT+MS      E                S +L 
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY

Query:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        F CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Q9D289 Trafficking protein particle complex subunit 6B1.2e-3047.79Show/hide
Query:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY
        ++E++G++VG  L ER+T +  RF D L+ +KFICKDFW+ +FKKQIDNL+TNH+G +VLQDN+FR L ++S      E                S +L 
Subjt:  RIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDPPQSEPQEISADGENKSSQATSMHLY

Query:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK
        F CG+IRG LSNLGI   V+A++S++PAC F V I+
Subjt:  FPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIK

Arabidopsis top hitse value%identityAlignment
AT3G05000.1 Transport protein particle (TRAPP) component7.6e-8180.92Show/hide
Query:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF
        MGREV+ESCVD++L EMV+ Y  RFYANKPELAARRIEAIGYQVGHQLSERYTMERPRF+DHLEAIKFICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+F
Subjt:  MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRF

Query:  RWLTRMSVDP-PQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA
        RWL+R+S+DP  ++E Q+ S  GE+K++QA SM+LYFPCGIIRG LSNLGIPCAVSADIS+LP CSFV+R+KA
Subjt:  RWLTRMSVDP-PQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAGAGAGGTTTCGGAGAGCTGCGTGGACAGCCTATTGACGGAAATGGTTTCCACTTACTGCAATCGATTCTACGCCAACAAGCCCGAGCTTGCCGCCCGCCGCAT
TGAGGCCATCGGCTATCAGGTCGGCCATCAGCTCTCCGAACGGTATACAATGGAGCGGCCTCGGTTCACTGATCATCTTGAGGCAATCAAATTTATCTGCAAGGACTTCT
GGTCTGAACTCTTCAAAAAGCAGATAGACAACTTGAAAACAAATCATAGAGGCACCTTTGTTTTGCAAGATAATCGATTTCGCTGGCTTACACGCATGTCGGTGGATCCT
CCTCAAAGTGAACCACAGGAAATTTCTGCGGATGGTGAAAACAAGTCGTCTCAGGCGACAAGCATGCATCTATATTTCCCATGTGGAATCATAAGGGGTGCTCTTTCAAA
TTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCTGCATGTTCATTTGTTGTTCGTATAAAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
GAAAAAGGAAAAAAAGAAAAAGAAAACGACAATTTTCGTAAGTTCTTAGAATCAATTCATACGACATGTCGTCGTAGTAGTGAATCAGGATTAAGAGCGAAATCATCACT
GGATCATCACCCTGCTCGTTGTTTGGTCTCCAATTCCATCGAGAGAATGGGGAGAGAGGTTTCGGAGAGCTGCGTGGACAGCCTATTGACGGAAATGGTTTCCACTTACT
GCAATCGATTCTACGCCAACAAGCCCGAGCTTGCCGCCCGCCGCATTGAGGCCATCGGCTATCAGGTCGGCCATCAGCTCTCCGAACGGTATACAATGGAGCGGCCTCGG
TTCACTGATCATCTTGAGGCAATCAAATTTATCTGCAAGGACTTCTGGTCTGAACTCTTCAAAAAGCAGATAGACAACTTGAAAACAAATCATAGAGGCACCTTTGTTTT
GCAAGATAATCGATTTCGCTGGCTTACACGCATGTCGGTGGATCCTCCTCAAAGTGAACCACAGGAAATTTCTGCGGATGGTGAAAACAAGTCGTCTCAGGCGACAAGCA
TGCATCTATATTTCCCATGTGGAATCATAAGGGGTGCTCTTTCAAATTTGGGAATTCCTTGTGCGGTTTCTGCTGATATTTCAAATCTTCCTGCATGTTCATTTGTTGTT
CGTATAAAGGCCTGACGAGAAGTGGGTAAAAAAAGTAGATTTTATCTGTGGGTTATGAAGATGCGCCACACCATTCCCTTCAGTTGTAATGGTCCTTTTTTTCATCTCTG
AACTATTGATACTTGAAGCACAAAACTCTGTTGGACAAACGTCTGTGTATGTATGAAATTCAATATATCAATTAATTTTCAGAATTTTAGAGATTGTAGTGACATGCATG
AACTTTTGAGGAGCGTGAATTCATATCTCATGATGAGGATGTTAAAATTTTATGCGTTGTTAGATGACTGAATATTACAGAACATCCTGAGATTAGTGGAGCTTTGCATA
TGCATTTTTAATCACGTAACAAGACTGATGAACTCAGTTTTATAATTTCA
Protein sequenceShow/hide protein sequence
MGREVSESCVDSLLTEMVSTYCNRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFTDHLEAIKFICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLTRMSVDP
PQSEPQEISADGENKSSQATSMHLYFPCGIIRGALSNLGIPCAVSADISNLPACSFVVRIKA