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Sed0002922 (gene) of Chayote v1 genome

Gene IDSed0002922
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG14:20284402..20285017
RNA-Seq ExpressionSed0002922
SyntenySed0002922
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594853.1 hypothetical protein SDJN03_11406, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1259.04Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERR K NP+++Q+   ++ D+ SG+SISAT    KK+MEL   +   ++ KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
KAG6604012.1 hypothetical protein SDJN03_04621, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1259.52Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQ--QQIGDMGSGISISATMK----KKLMELVESSSDL---KWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP++ Q  Q++ D+ SG+SISAT      KK+ME+   ++++   KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQ--QQIGDMGSGISISATMK----KKLMELVESSSDL---KWAFEPKSQLGLAASTGLFSA
XP_022962826.1 uncharacterized protein LOC111463202 [Cucurbita moschata]1.1e-1260.24Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP+++Q+   ++ D+ SG+SISAT    KK+MEL   +   ++ KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
XP_023003555.1 uncharacterized protein LOC111497122 [Cucurbita maxima]2.4e-1259.04Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP+++++   ++ D+ SG+SISAT    KK+MEL   +   ++ KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
XP_038882836.1 uncharacterized protein LOC120073972 [Benincasa hispida]8.1e-1359.52Show/hide
Query:  MADIAILVAEEYERRMKINPK--KQQQQIGDMGSGISISAT----MKKKLMELVESS---SDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP   +++Q++ D+ SG+SISAT      KK+ME+ + +   S+ KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPK--KQQQQIGDMGSGISISAT----MKKKLMELVESS---SDLKWAFEPKSQLGLAASTGLFSA
TrEMBL top hitse value%identityAlignment
A0A0A0KK75 Uncharacterized protein2.4e-1054.44Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQ----QQIGDMG-SGISISAT----MKKKLMELVE------SSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERR K NP++ Q    Q++ ++G SG+SISAT      KK+ME+ +        S+  W FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQ----QQIGDMG-SGISISAT----MKKKLMELVE------SSSDLKWAFEPKSQLGLAASTGLFSA
A0A5A7T3Y6 Uncharacterized protein2.4e-1053.93Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQ----QQIGDMGSGISISAT----MKKKLMELVESS------SDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERR K +P++ Q    Q++ D+GSG+SISAT      KK+ME+ + +      S+    FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQ----QQIGDMGSGISISAT----MKKKLMELVESS------SDLKWAFEPKSQLGLAASTGLFSA
A0A6J1BTY3 uncharacterized protein LOC1110057395.7e-1258.54Show/hide
Query:  MADIAILVAEEYERRMKINP---KKQQQQIGDMGSGISISAT----MKKKLMELVESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP    KQ+Q+I    SG+SISAT      K++++L + ++D KW  EPKSQ+G AAS G FSA
Subjt:  MADIAILVAEEYERRMKINP---KKQQQQIGDMGSGISISAT----MKKKLMELVESSSDLKWAFEPKSQLGLAASTGLFSA
A0A6J1HEA8 uncharacterized protein LOC1114632025.1e-1360.24Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP+++Q+   ++ D+ SG+SISAT    KK+MEL   +   ++ KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
A0A6J1KS29 uncharacterized protein LOC1114971221.1e-1259.04Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK NP+++++   ++ D+ SG+SISAT    KK+MEL   +   ++ KW FEPKSQ+G AASTG FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQQ---QIGDMGSGISISATMK--KKLMEL---VESSSDLKWAFEPKSQLGLAASTGLFSA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G65207.1 unknown protein2.5e-0445.33Show/hide
Query:  MADIAILVAEEYERRMKINPKKQQQQIGDMGSGISISATMKKKLMELVESSSDLKWAFEPKSQLGLAASTGLFSA
        MADIAILVAEEYERRMK      +    +      I A M     ++   S  LK  FE KS+  LA S G FSA
Subjt:  MADIAILVAEEYERRMKINPKKQQQQIGDMGSGISISATMKKKLMELVESSSDLKWAFEPKSQLGLAASTGLFSA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGACATCGCAATTCTGGTAGCAGAGGAATACGAAAGAAGGATGAAAATCAATCCCAAAAAACAACAACAACAGATTGGGGATATGGGATCTGGGATTTCAATCTC
TGCAACTATGAAGAAGAAATTGATGGAATTGGTGGAGTCTTCGTCGGATTTGAAATGGGCCTTTGAGCCCAAATCGCAACTTGGGCTGGCGGCCTCCACTGGACTCTTCT
CTGCCTGA
mRNA sequenceShow/hide mRNA sequence
GTCATTATATAATTCATAATAATAATAATAATCTCCCCATTCCAAAATCAACCAAAAAAAAAAAAAGCTTGAAAAATCAGAGCCATGGCGGACATCGCAATTCTGGTAGC
AGAGGAATACGAAAGAAGGATGAAAATCAATCCCAAAAAACAACAACAACAGATTGGGGATATGGGATCTGGGATTTCAATCTCTGCAACTATGAAGAAGAAATTGATGG
AATTGGTGGAGTCTTCGTCGGATTTGAAATGGGCCTTTGAGCCCAAATCGCAACTTGGGCTGGCGGCCTCCACTGGACTCTTCTCTGCCTGAGAGAGATCATTATGTTAA
TACTCTAAATCTTTCTCATCTCTGTTTCTTCCATTTGTACATTCCAATGTTTCTTCTGCTTTCCTTTACTTTCCAAAAACAATGGTCACTTATTTTCTTTTAATTTAACC
ATATATATATATATTTGATTATAAAGATCATTGAGTTTATGGGTCATTTCTGATTCTGCTACGGTGGATTTGATTTTTCATGACTTTATTTTTTTAATTTAGGCGCAAGA
ATCAAATTTGTTTGCTTTTTTTCCCCTTCGTAACAGAGATGGAGAGATCTATCAACATTATCAGAC
Protein sequenceShow/hide protein sequence
MADIAILVAEEYERRMKINPKKQQQQIGDMGSGISISATMKKKLMELVESSSDLKWAFEPKSQLGLAASTGLFSA