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Sed0002930 (gene) of Chayote v1 genome

Gene IDSed0002930
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:2970934..2971453
RNA-Seq ExpressionSed0002930
SyntenySed0002930
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044341.1 hypothetical protein E6C27_scaffold46G00670 [Cucumis melo var. makuwa]6.0e-0858.44Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI
        MEMK K AL+ MVV +VVMAQS TTI   DE I+L    GG   +   RVCP  +LPC+TDSECSPC C   +GSCI
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI

KGN52766.1 hypothetical protein Csa_015422 [Cucumis sativus]3.4e-1967.53Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYY--KPPPRVCPVMVLPCQTDSECSPCYCVNGSCI
        MEMK K+AL+ MVV++VVM +SAT  A +DE I+LP+ G  SYY   PPPRVCP+M+LPC+TDSECSPCYC NGSCI
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYY--KPPPRVCPVMVLPCQTDSECSPCYCVNGSCI

KGN52767.1 hypothetical protein Csa_015168 [Cucumis sativus]2.3e-0755.84Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI
        MEMK K AL+ MVV +VVMAQS TTI   DE I+L    GG   +   RVCP  +LPC+TDSECSPC C   +G+C+
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI

TYK29470.1 hypothetical protein E5676_scaffold655G00670 [Cucumis melo var. makuwa]1.3e-0757.14Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI
        MEMK K AL+ MVV +VVMAQS TTI   DE I++    GG   +   RVCP  +LPC+TDSECSPC C   +GSCI
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI

TrEMBL top hitse value%identityAlignment
A0A0A0KWE9 Uncharacterized protein1.1e-0755.84Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI
        MEMK K AL+ MVV +VVMAQS TTI   DE I+L    GG   +   RVCP  +LPC+TDSECSPC C   +G+C+
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI

A0A0A0KY39 Uncharacterized protein1.6e-1967.53Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYY--KPPPRVCPVMVLPCQTDSECSPCYCVNGSCI
        MEMK K+AL+ MVV++VVM +SAT  A +DE I+LP+ G  SYY   PPPRVCP+M+LPC+TDSECSPCYC NGSCI
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYY--KPPPRVCPVMVLPCQTDSECSPCYCVNGSCI

A0A5A7TRY5 Uncharacterized protein2.9e-0858.44Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI
        MEMK K AL+ MVV +VVMAQS TTI   DE I+L    GG   +   RVCP  +LPC+TDSECSPC C   +GSCI
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI

A0A5D3E1Q5 Uncharacterized protein6.5e-0857.14Show/hide
Query:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI
        MEMK K AL+ MVV +VVMAQS TTI   DE I++    GG   +   RVCP  +LPC+TDSECSPC C   +GSCI
Subjt:  MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYC--VNGSCI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAAAAGAAGCTTGCTTTGATGGTGATGGTGGTGATGGTGGTGGTTATGGCTCAATCTGCCACCACGATCGCGGTCGTGGACGAGGCGATTCAGCTCCCGTC
CCGTGGCGGAGGAAGTTATTACAAGCCGCCGCCGAGGGTGTGTCCTGTTATGGTATTGCCATGCCAGACTGACTCTGAGTGTTCTCCATGCTATTGTGTTAATGGCTCCT
GCATTTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTCACCTATAAATACATTGCTTGCGAAGGCAAACAAAAACGTACCATTAGATTAATTGGAAAAAAAAAAGAGAGATGGAGATGAAAAAGAAGCTTGCTTTGATGGT
GATGGTGGTGATGGTGGTGGTTATGGCTCAATCTGCCACCACGATCGCGGTCGTGGACGAGGCGATTCAGCTCCCGTCCCGTGGCGGAGGAAGTTATTACAAGCCGCCGC
CGAGGGTGTGTCCTGTTATGGTATTGCCATGCCAGACTGACTCTGAGTGTTCTCCATGCTATTGTGTTAATGGCTCCTGCATTTGAAAACATGCAAGAACAAGATCAAGA
TCAAGAAAATGTTTGTCATTTTTAATTACTGATGTTTCCAATGTGTGTGTTTTTTCTTCTTGTCTTTCTATGTTTTTTATGCAGAATAAAGCTTCCACTTTTGATCACTC
TTTGTCATGTTTGAGTGATTATGATCATGTGCTTTTGCAAATTTGTTAATGAAGTGCTGATTTAATGGTGGTTACATTAA
Protein sequenceShow/hide protein sequence
MEMKKKLALMVMVVMVVVMAQSATTIAVVDEAIQLPSRGGGSYYKPPPRVCPVMVLPCQTDSECSPCYCVNGSCI