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Sed0002937 (gene) of Chayote v1 genome

Gene IDSed0002937
OrganismSechium edule (Chayote v1)
Descriptionsuccinate dehydrogenase assembly factor 1, mitochondrial
Genome locationLG10:32819204..32820001
RNA-Seq ExpressionSed0002937
SyntenySed0002937
Gene Ontology termsGO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607523.1 Succinate dehydrogenase assembly factor 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]5.1e-3178.35Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE
        MG+SS PKLSG+QKQVL LYRAFLRAARSKS EDR+ IESVVSAEFRRNA  IDRK+FI+IEYLLRRG KQLDQL+SPATV LS+L L+S P++ SE
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE

XP_022932494.1 LOW QUALITY PROTEIN: succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita moschata]5.1e-3178.35Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE
        MG+SS PKLSG+QKQVL LY AFLRAARSKS EDR+ IESVVSAEFRRNA  IDRK+FI+IEYLLRRG KQLDQL+SPATV LS+L L+SSP++ SE
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE

XP_022973401.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita maxima]1.0e-3179.59Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP
        MG+SS PKLSG+Q QVL LYRAFLRAARSKS EDR+ IESVVSAEFRRNA  ID KNFI+IEYLLRRG KQLDQL+SPATV LSSL L+SSP++ SEP
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP

XP_023525064.1 succinate dehydrogenase assembly factor 1, mitochondrial [Cucurbita pepo subsp. pepo]2.4e-3381.63Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP
        MG+SS PKLSG+Q+QVL LYRAFLRAARSKS EDRR IESVVSAEFRRNA  IDRKNFI+IEYLLRRG KQLDQL+SPATV LSSL L+SSP++ SEP
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP

XP_031263493.1 succinate dehydrogenase assembly factor 1A, mitochondrial [Pistacia vera]8.6e-3174.23Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE
        MG SSGP+LSG+QKQVL LYR FLRAARSKSPEDR  +E++VS EFR+N+ Q+DRKNFI+IEYLLRRG KQL+QLKSP TVRLSSLN+  S +K+SE
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE

TrEMBL top hitse value%identityAlignment
A0A1S4D7T1 succinate dehydrogenase assembly factor 1, mitochondrial-like1.8e-2973.96Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHS
        MG SSGP+LSG+QKQVL LYR FLRAARSK  E+RR IES+VSAEF +N+ Q+DRKNFI+IEYLLRRG KQLDQLKSP TV LSSL++DSS +++S
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHS

A0A438HEZ5 Succinate dehydrogenase assembly factor 1, mitochondrial1.8e-2975.53Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSK
        MG SSGP+ SG+QKQVLGLYR FLRAARSKSPEDRR IES VSAEFRRN+  +DRKNF++IEYLLRRG KQL+QL SPAT+ LSSLNL  S ++
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSK

A0A6J1EX50 LOW QUALITY PROTEIN: succinate dehydrogenase assembly factor 1, mitochondrial2.4e-3178.35Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE
        MG+SS PKLSG+QKQVL LY AFLRAARSKS EDR+ IESVVSAEFRRNA  IDRK+FI+IEYLLRRG KQLDQL+SPATV LS+L L+SSP++ SE
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSE

A0A6J1I7F5 succinate dehydrogenase assembly factor 1, mitochondrial4.9e-3279.59Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP
        MG+SS PKLSG+Q QVL LYRAFLRAARSKS EDR+ IESVVSAEFRRNA  ID KNFI+IEYLLRRG KQLDQL+SPATV LSSL L+SSP++ SEP
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP

F6HMZ0 Uncharacterized protein1.8e-2975.53Show/hide
Query:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSK
        MG SSGP+ SG+QKQVLGLYR FLRAARSKSPEDRR IES VSAEFRRN+  +DRKNF++IEYLLRRG KQL+QL SPAT+ LSSLNL  S ++
Subjt:  MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSK

SwissProt top hitse value%identityAlignment
A6ZYX9 Succinate dehydrogenase assembly factor 1, mitochondrial3.4e-0642.25Show/hide
Query:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSP
        +LSGLQK+VL LYRA +R A +K  E++ +  + +  EF +  N + RK+F  IE+LLR G K++     P
Subjt:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSP

A8PU71 Succinate dehydrogenase assembly factor 1, mitochondrial7.6e-0640.23Show/hide
Query:  SGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHS
        S LQ+QVL LYR  LRA R K   + R     V AEFR++A  + R + + IEYL RRG +QL  L+S     + +      P++ S
Subjt:  SGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHS

B0K036 Succinate dehydrogenase assembly factor 1, mitochondrial9.0e-0748.57Show/hide
Query:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKS
        +LS LQ+QVL LYR  LRA R K   + R     V AEFR++A+ + R + + IEYL RRG +QL  L+S
Subjt:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKS

Q3E785 Succinate dehydrogenase assembly factor 1, mitochondrial3.4e-0642.25Show/hide
Query:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSP
        +LSGLQK+VL LYRA +R A +K  E++ +  + +  EF +  N + RK+F  IE+LLR G K++     P
Subjt:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSP

Q54HG5 Succinate dehydrogenase assembly factor 1A, mitochondrial5.8e-0640Show/hide
Query:  SGLQKQVLGLYRAFLRAARSKSPED-RRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSP
        SGLQK VL LYR+FLR +  K  ++    I + +  +FR  A  I +++   IE LL +G +QL+Q++ P
Subjt:  SGLQKQVLGLYRAFLRAARSKSPED-RRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSP

Arabidopsis top hitse value%identityAlignment
AT2G39725.1 LYR family of Fe/S cluster biogenesis protein2.0e-2569.05Show/hide
Query:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSS
        KLSG+QKQVL LYR FLRAARS+  EDR+ IE +VS EFR N+ ++DRKNF +IEYLLR GTKQLDQLKSPA V LSS+ + +S
Subjt:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSS

AT2G39725.2 LYR family of Fe/S cluster biogenesis protein2.0e-2569.05Show/hide
Query:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSS
        KLSG+QKQVL LYR FLRAARS+  EDR+ IE +VS EFR N+ ++DRKNF +IEYLLR GTKQLDQLKSPA V LSS+ + +S
Subjt:  KLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGATCTCATCGGGGCCTAAGCTCTCAGGGCTGCAAAAGCAAGTGCTCGGTCTATACAGAGCGTTTCTCCGAGCAGCTCGTTCCAAATCCCCCGAAGATCGCCGCCA
CATCGAATCCGTTGTCTCCGCCGAGTTCCGCCGCAACGCCAACCAAATCGATCGCAAGAATTTCATCCACATCGAGTACCTTCTTCGTCGAGGTACCAAACAGTTGGATC
AACTTAAAAGCCCCGCAACTGTTCGATTGTCGTCGCTGAATCTCGATTCGTCTCCGTCCAAACATTCCGAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATAAAGTTAAAGATGCATAGAAGAAGCTAATGGTAGATAGCGAGAGCGAGGTGTACCAAGAATAAGAGCGACAATGGGGATCTCATCGGGGCCTAAGCTCTCAGGGCTGC
AAAAGCAAGTGCTCGGTCTATACAGAGCGTTTCTCCGAGCAGCTCGTTCCAAATCCCCCGAAGATCGCCGCCACATCGAATCCGTTGTCTCCGCCGAGTTCCGCCGCAAC
GCCAACCAAATCGATCGCAAGAATTTCATCCACATCGAGTACCTTCTTCGTCGAGGTACCAAACAGTTGGATCAACTTAAAAGCCCCGCAACTGTTCGATTGTCGTCGCT
GAATCTCGATTCGTCTCCGTCCAAACATTCCGAGCCTTGAAATTTTAGATTCTCTATTTTGCGATGAATGGATTCTCTGTTTTGCTCGATTCCGTTAATTTTTCCTCCGT
CGTCTTGCTTTTCATGGCGATCGATTTAGAAGAATGGTCGGTTGCAGAATTTTGGAACGTTTGAAAATGGGGATGAATTTCGTGCCTTTCGAAATAAGAAAGCTACGAGT
TACGAATTTAGTGTTAAAAAATAATTATGAATTTAGTCCATATATGTAGTTTTGCTATTGGAGAAAATTATCTTCAACTTCTTGATTATTATTATTATTATTTAAATAAA
TGTAATTACGCCTTTTCTAGGTCAAACACTAGAAGACATCGACG
Protein sequenceShow/hide protein sequence
MGISSGPKLSGLQKQVLGLYRAFLRAARSKSPEDRRHIESVVSAEFRRNANQIDRKNFIHIEYLLRRGTKQLDQLKSPATVRLSSLNLDSSPSKHSEP