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Sed0002943 (gene) of Chayote v1 genome

Gene IDSed0002943
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive family protein
Genome locationLG06:15395976..15396440
RNA-Seq ExpressionSed0002943
SyntenySed0002943
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444291.1 PREDICTED: uncharacterized protein LOC103487659 [Cucumis melo]6.0e-2754.14Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSG-NNVILYVG-------------------------------
        MKKINSLLRKCKSLSRQLGRSSSY SLRSKSTREDLWVCE   +EEDF+    Q  KVSG NNV+LYVG                               
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSG-NNVILYVG-------------------------------

Query:  ------------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                                +VLFDHLLWMLENSDPNI FDSN EELAELYVF
Subjt:  ------------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

XP_011653970.1 auxin-responsive protein SAUR78 [Cucumis sativus]3.2e-2856.13Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLE-KVSGNNVILYVG-------------------------------
        MKKINSLLRKCKSLSRQLGRSSSY SLRSKSTREDLWVCE   +EEDF+   QQ+E KVSG+NVILYVG                               
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLE-KVSGNNVILYVG-------------------------------

Query:  ----------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                              +VLFDHLLWMLENSDPNI FDSN EELAELYVF
Subjt:  ----------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

XP_022135446.1 uncharacterized protein LOC111007398 [Momordica charantia]1.7e-2957.72Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLW-VCESKM-EEEDFDDDH--QQLEKVSGNNVILYVG----------------------------
        MKKINSLLRKCKSLSRQLGRSSSY SLRSKSTREDLW +C +KM EEE+ ++DH  QQLEKV G+NVI+YVG                            
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLW-VCESKM-EEEDFDDDH--QQLEKVSGNNVILYVG----------------------------

Query:  ----------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                        +VLFDHLLWMLENSDPNI FDSN EELA+LYVF
Subjt:  ----------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

XP_023536060.1 auxin-responsive protein SAUR71 [Cucurbita pepo subsp. pepo]3.2e-2853.29Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQ------LEKVSGNNVILYVG--------------------------
        M K+NSLLRKCKSLSRQLGRSSSY SLRSKSTREDLWVC+  MEE +  ++H++       EKVSG+NVI+YVG                          
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQ------LEKVSGNNVILYVG--------------------------

Query:  -------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                           +VLFDHLLWMLENSDPNI FDSN EELAELYVF
Subjt:  -------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

XP_038899559.1 auxin-responsive protein SAUR78 [Benincasa hispida]1.1e-3360.14Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSGNNVILYVG--------------------------------
        MKKIN LLRKCKSLSRQLGRSSSY SLRSKSTREDLWVC +KMEEEDF+   QQLEKVSGN+VILYVG                                
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSGNNVILYVG--------------------------------

Query:  ---------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                       +VLFDHLLWMLENSDPNI+FDSN EELAELYVF
Subjt:  ---------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

TrEMBL top hitse value%identityAlignment
A0A0A0L464 Uncharacterized protein4.4e-3686.27Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLE-KVSGNNVILYVGIVLFDHLLWMLENSDPNINFDSNFEELAELY
        MKKINSLLRKCKSLSRQLGRSSSY SLRSKSTREDLWVCE   +EEDF+   QQ+E KVSG+NVILYVGIVLFDHLLWMLENSDPNI FDSN EELAELY
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLE-KVSGNNVILYVGIVLFDHLLWMLENSDPNINFDSNFEELAELY

Query:  VF
        VF
Subjt:  VF

A0A1S3B9J9 uncharacterized protein LOC1034876592.9e-2754.14Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSG-NNVILYVG-------------------------------
        MKKINSLLRKCKSLSRQLGRSSSY SLRSKSTREDLWVCE   +EEDF+    Q  KVSG NNV+LYVG                               
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSG-NNVILYVG-------------------------------

Query:  ------------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                                +VLFDHLLWMLENSDPNI FDSN EELAELYVF
Subjt:  ------------------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

A0A6J1C0S4 uncharacterized protein LOC1110073988.1e-3057.72Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLW-VCESKM-EEEDFDDDH--QQLEKVSGNNVILYVG----------------------------
        MKKINSLLRKCKSLSRQLGRSSSY SLRSKSTREDLW +C +KM EEE+ ++DH  QQLEKV G+NVI+YVG                            
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLW-VCESKM-EEEDFDDDH--QQLEKVSGNNVILYVG----------------------------

Query:  ----------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF
                        +VLFDHLLWMLENSDPNI FDSN EELA+LYVF
Subjt:  ----------------IVLFDHLLWMLENSDPNINFDSNFEELAELYVF

B9RI47 Uncharacterized protein6.4e-1951.91Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQ----------------------------QLEKVSGNNVILYV--GIV
        MKKIN +LRKCKSLSRQLGRSSSY SLRSKSTRE+LW      + ++ D++HQ                            Q  K      IL V   +V
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQ----------------------------QLEKVSGNNVILYV--GIV

Query:  LFDHLLWMLENSDPNINFDSNFEELAELYVF
        LFDHLLWMLEN+DPN++FDS  EELAELYVF
Subjt:  LFDHLLWMLENSDPNINFDSNFEELAELYVF

V7AKJ2 Uncharacterized protein5.5e-1851.56Show/hide
Query:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDD-----------------DHQQLE--------KVSGNNVILYVG--IVLFD
        MKKIN LLRKCKSLSRQLGRSSSY SLRSKST+ED+W      E+E  +                  +H  L         KVS  + +L V   +VLFD
Subjt:  MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDD-----------------DHQQLE--------KVSGNNVILYVG--IVLFD

Query:  HLLWMLENSDPNINFDSNFEELAELYVF
        HLLWMLEN+DP  + +S  EELAELYVF
Subjt:  HLLWMLENSDPNINFDSNFEELAELYVF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G12955.1 SAUR-like auxin-responsive protein family1.1e-0530.28Show/hide
Query:  KINSLLRKCKSLSRQLGRSSSYRSLRSKSTRED-------------------------------------------LWVCESKMEEEDFDDDHQQLEKVS
        ++  +LR+CKS+S QLGRS SY SLRSKS R D                                           L   + + EE+D +D         
Subjt:  KINSLLRKCKSLSRQLGRSSSYRSLRSKSTRED-------------------------------------------LWVCESKMEEEDFDDDHQQLEKVS

Query:  GNNVI-LYVGIVLFDHLLWMLENSDPNINFDSNFEELAELYV
        G+ +I +   +VLFDHLLWMLE  D  ++   + ++ A LY+
Subjt:  GNNVI-LYVGIVLFDHLLWMLENSDPNINFDSNFEELAELYV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAATAAACTCCCTATTGAGAAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGATCTTCATCTTATAGAAGCTTGAGGTCCAAATCCACAAGAGAAGATCTTTG
GGTTTGTGAAAGCAAAATGGAAGAAGAAGATTTTGATGATGATCATCAACAGCTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGAATTGTTCTGTTTGATC
ATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATATCAATTTTGATTCAAATTTTGAGGAATTGGCTGAGCTTTATGTGTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAATAAACTCCCTATTGAGAAAGTGCAAGAGCCTTTCAAGGCAATTGGGAAGATCTTCATCTTATAGAAGCTTGAGGTCCAAATCCACAAGAGAAGATCTTTG
GGTTTGTGAAAGCAAAATGGAAGAAGAAGATTTTGATGATGATCATCAACAGCTTGAAAAGGTGAGTGGCAATAATGTAATTTTATATGTTGGAATTGTTCTGTTTGATC
ATCTCTTGTGGATGTTGGAAAACTCTGATCCAAATATCAATTTTGATTCAAATTTTGAGGAATTGGCTGAGCTTTATGTGTTTTGA
Protein sequenceShow/hide protein sequence
MKKINSLLRKCKSLSRQLGRSSSYRSLRSKSTREDLWVCESKMEEEDFDDDHQQLEKVSGNNVILYVGIVLFDHLLWMLENSDPNINFDSNFEELAELYVF