; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002944 (gene) of Chayote v1 genome

Gene IDSed0002944
OrganismSechium edule (Chayote v1)
DescriptionCyclin-D1-1-like
Genome locationLG10:5112106..5114782
RNA-Seq ExpressionSed0002944
SyntenySed0002944
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594969.1 hypothetical protein SDJN03_11522, partial [Cucurbita argyrosperma subsp. sororia]9.8e-6273.91Show/hide
Query:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL
        MGNCQAAEAATVVIQHPG N + +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KL
Subjt:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL

Query:  GKLLKEGGAL------SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        GKLLKEGGAL      SASNPN NSKSQNY+KA      R E+   G S GGRGGG  RGMGRH+GGG QWRPAL+SIAEVGIN
Subjt:  GKLLKEGGAL------SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

XP_004141857.1 uncharacterized protein LOC101222947 [Cucumis sativus]1.4e-6373.8Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGAL----------SASNPNQNSKSQNYIK----AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        KLLKEGGAL          S SNPN NSKSQNY+K    A HR E+S+ G SGGGRG   QRGMGRH+GGGSQWRPAL+SIAE+GIN
Subjt:  KLLKEGGAL----------SASNPNQNSKSQNYIK----AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

XP_016899236.1 PREDICTED: uncharacterized protein LOC103484864 [Cucumis melo]3.1e-6373.02Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGAL----------SASNPNQNSKSQNYIK------AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        KLLKEGGAL          S SNPN NSKSQNY+K      A HR E+S  G SGGGRG   QRGMGRH+GGGSQWRPAL+SIAE+GIN
Subjt:  KLLKEGGAL----------SASNPNQNSKSQNYIK------AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

XP_023003398.1 uncharacterized protein LOC111497021 [Cucurbita maxima]1.5e-6273.4Show/hide
Query:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL
        MGNCQAAEAATVVIQHPG N R +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGTPI+HLKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KL
Subjt:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL

Query:  GKLLKEGGAL----------SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        GKLLKEGGAL          SASNPN NSKSQNY+KA      R E+   G S GGRGGG  RGMGRH+GGG QWRPAL+SIAEVGIN
Subjt:  GKLLKEGGAL----------SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

XP_038883937.1 uncharacterized protein LOC120074768 [Benincasa hispida]1.6e-6473.91Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL+L S+ T K++NGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGAL-----------SASNPNQNSKSQNYIKAAH-RPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        KLLKEGGAL           SASNPN NSKSQNY+K       S +  SGGGRGGG QRGMGRH+GGGSQWRPAL+SIAE+GIN
Subjt:  KLLKEGGAL-----------SASNPNQNSKSQNYIKAAH-RPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

TrEMBL top hitse value%identityAlignment
A0A0A0KLJ3 Uncharacterized protein6.6e-6473.8Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGAL----------SASNPNQNSKSQNYIK----AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        KLLKEGGAL          S SNPN NSKSQNY+K    A HR E+S+ G SGGGRG   QRGMGRH+GGGSQWRPAL+SIAE+GIN
Subjt:  KLLKEGGAL----------SASNPNQNSKSQNYIK----AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

A0A1S4DTC0 uncharacterized protein LOC1034848641.5e-6373.02Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATVVIQHPGNQ+ +RIYWSVSA EIM +NPGHYVAL++ S +T KS+NGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGAL----------SASNPNQNSKSQNYIK------AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        KLLKEGGAL          S SNPN NSKSQNY+K      A HR E+S  G SGGGRG   QRGMGRH+GGGSQWRPAL+SIAE+GIN
Subjt:  KLLKEGGAL----------SASNPNQNSKSQNYIK------AAHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

A0A6J1GER4 uncharacterized protein LOC1114535163.2e-5868.93Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATVVI HPGN + +RIYWSVSA E+M +NPGHYVAL+L S +TF SQNG PI+ LKLLRP+DTLLIGHVYRLI+F+DVLKEF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGALSAS-----NPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        KLL+EGGALS       + + ++ SQN+ K   R ESS+ GS GG GGG QR MG+H+GGG QWRPAL+SIAE GIN
Subjt:  KLLKEGGALSAS-----NPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

A0A6J1HGV9 uncharacterized protein LOC1114634361.8e-6172.34Show/hide
Query:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL
        MGNCQAAEAATVVIQHPG N + +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGTPI+ LKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KL
Subjt:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL

Query:  GKLLKEGGAL----------SASNPNQNSKSQNYIKA----AHRPESSSNGS-GGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        GKLLKEGGAL          SASNPN NSKSQNY+KA      R E+   GS  GGRGGG  RGMGRH+GGG QWRPAL+SIAEVGIN
Subjt:  GKLLKEGGAL----------SASNPNQNSKSQNYIKA----AHRPESSSNGS-GGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

A0A6J1KWE0 uncharacterized protein LOC1114970217.3e-6373.4Show/hide
Query:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL
        MGNCQAAEAATVVIQHPG N R +RIYWSVSA +IM +NPGHYVALV+ S +T K+QNGTPI+HLKLLRP+DTLLIGHVYRLITF+DVLKEF  KKC KL
Subjt:  MGNCQAAEAATVVIQHPG-NQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKL

Query:  GKLLKEGGAL----------SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN
        GKLLKEGGAL          SASNPN NSKSQNY+KA      R E+   G S GGRGGG  RGMGRH+GGG QWRPAL+SIAEVGIN
Subjt:  GKLLKEGGAL----------SASNPNQNSKSQNYIKA----AHRPESSSNG-SGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G10530.1 unknown protein9.3e-1836.07Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVL--------NSTAT-----FKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDV
        MGNCQA  AA +V+QHPG    DR Y SVS  E+M   PGHYV+L++        N  AT      K +       ++LLRP + L++GH YRLIT Q+V
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVL--------NSTAT-----FKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDV

Query:  LKEFTEKKCSKLGK--LLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAE
        +K   EKK +K  K  + K   A   S+     K Q       R  +S   S                     WRP+L+SI+E
Subjt:  LKEFTEKKCSKLGK--LLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAE

AT5G50090.1 unknown protein4.0e-2140.51Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTA--TFKSQNGTPIR--HLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKC
        MGNCQA + A VVIQHP N + +++   VSA  +M  NPGH V+L++++TA  +  S +G P+R   +KLLRP DTL++GHVYRLIT ++V+K    KKC
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTA--TFKSQNGTPIR--HLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKC

Query:  SKLGK----------LLKEGGALSASNPNQ-----NSKSQNYIKAAHRPESSSNGSGG
        SKL K          ++K   +    N +Q       K ++ I  + +P   S   GG
Subjt:  SKLGK----------LLKEGGALSASNPNQ-----NSKSQNYIKAAHRPESSSNGSGG

AT5G50090.2 unknown protein1.1e-2141.83Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTA--TFKSQNGTPIR--HLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKC
        MGNCQA + A VVIQHP N + +++   VSA  +M  NPGH V+L++++TA  +  S +G P+R   +KLLRP DTL++GHVYRLIT ++V+K    KKC
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTA--TFKSQNGTPIR--HLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKC

Query:  SKLGK----------LLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGG
        SKL K          ++K   +    N +Q  K ++ I  + +P   S   GG
Subjt:  SKLGK----------LLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGG

AT5G62900.1 unknown protein5.8e-2040.35Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAAT VIQ P + ++ R Y +V+A E++ ++PGH+VAL+L+S           +  +KLLRP+D LL+GHVYRLI+ ++V+K    KK    G
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQ---WRPALKSIAE
        K+ K  G  S +    N  +        R ES+S+     R    QRGM    G  ++   W+P+L+SI+E
Subjt:  KLLKEGGALSASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQ---WRPALKSIAE

AT5G67620.1 unknown protein6.0e-4151.93Show/hide
Query:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG
        MGNCQAAEAATV+I HP   + +RIYWSV+A +IM +NPGHYVA+V+ S  T K++ G P++ LKLLRP+DTLLIGHVYRL++F++VL EF  KKC KLG
Subjt:  MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLG

Query:  KLLKEGGALSASNPNQNSKSQNYIKAAHR--PESSSNGSGGGRGGGV--QRG----MGRHHG---GGSQWRPALKSIAEVG
        KLLKEGG L  +      + +   +   +  P S  N +  G    V  + G    M R HG   GG  WRPAL SI E G
Subjt:  KLLKEGGALSASNPNQNSKSQNYIKAAHR--PESSSNGSGGGRGGGV--QRG----MGRHHG---GGSQWRPALKSIAEVG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTGTCAGGCGGCAGAGGCGGCGACGGTGGTGATTCAGCACCCTGGAAATCAAAGGACGGACAGGATTTATTGGTCCGTAAGTGCTCAAGAAATCATGACCGC
TAATCCAGGCCATTACGTTGCGCTCGTTTTGAACTCAACCGCCACTTTCAAGTCCCAAAATGGAACCCCCATCAGGCACCTCAAGCTTCTCCGCCCCAATGATACGCTTC
TCATCGGCCACGTCTATCGTCTCATCACCTTTCAAGATGTACTGAAAGAGTTTACTGAAAAGAAATGTTCCAAGCTGGGGAAGTTACTGAAAGAGGGAGGAGCCCTTTCT
GCTTCAAATCCAAATCAAAATTCTAAATCCCAAAATTACATTAAGGCAGCACACCGGCCGGAAAGCAGCAGTAACGGCAGCGGCGGCGGAAGAGGCGGAGGAGTACAGAG
AGGCATGGGAAGGCATCACGGCGGTGGGAGTCAATGGAGGCCAGCCTTAAAGAGCATTGCAGAAGTTGGAATTAATATTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATAATAATAACACATTTGGAATTGTTGAGTTCTAGAGATTTGGGTATTTTTTTCCGGCCAAGAAAAAAAATAGGAAAGGGGATGGGGAATTGTCAGGCGGCAGAGGCGGC
GACGGTGGTGATTCAGCACCCTGGAAATCAAAGGACGGACAGGATTTATTGGTCCGTAAGTGCTCAAGAAATCATGACCGCTAATCCAGGCCATTACGTTGCGCTCGTTT
TGAACTCAACCGCCACTTTCAAGTCCCAAAATGGAACCCCCATCAGGCACCTCAAGCTTCTCCGCCCCAATGATACGCTTCTCATCGGCCACGTCTATCGTCTCATCACC
TTTCAAGATGTACTGAAAGAGTTTACTGAAAAGAAATGTTCCAAGCTGGGGAAGTTACTGAAAGAGGGAGGAGCCCTTTCTGCTTCAAATCCAAATCAAAATTCTAAATC
CCAAAATTACATTAAGGCAGCACACCGGCCGGAAAGCAGCAGTAACGGCAGCGGCGGCGGAAGAGGCGGAGGAGTACAGAGAGGCATGGGAAGGCATCACGGCGGTGGGA
GTCAATGGAGGCCAGCCTTAAAGAGCATTGCAGAAGTTGGAATTAATATTATTTGAACAAAAAAACAAAATTTAAAAAGAAAAAGGCAATATGAACACAAATAGAATCTG
CAAATTGCCCTTTTGCTTTCACCGTCTTTAATGAATAATTAAT
Protein sequenceShow/hide protein sequence
MGNCQAAEAATVVIQHPGNQRTDRIYWSVSAQEIMTANPGHYVALVLNSTATFKSQNGTPIRHLKLLRPNDTLLIGHVYRLITFQDVLKEFTEKKCSKLGKLLKEGGALS
ASNPNQNSKSQNYIKAAHRPESSSNGSGGGRGGGVQRGMGRHHGGGSQWRPALKSIAEVGINII