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Sed0002945 (gene) of Chayote v1 genome

Gene IDSed0002945
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:35191055..35193480
RNA-Seq ExpressionSed0002945
SyntenySed0002945
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034486.1 putative root meristem growth factor 8 [Cucumis melo var. makuwa]3.5e-3264.44Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-----RVEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKE
        MGLI M +LCC  + ILLIP ASSHALDQSSPLQAT+AVHS   VL RKFKM  EA     RVE QGFQV  + D  KE +SG    +E+  +KL++ K 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-----RVEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKE

Query:  RKWVNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        RK VNVADMSS+ FTMDY+H+KRRRPVHNMSL RP
Subjt:  RKWVNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

KAG6601362.1 hypothetical protein SDJN03_06595, partial [Cucurbita argyrosperma subsp. sororia]6.6e-3164.52Show/hide
Query:  LLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWVNVADMSS
        +LCC  L IL +PFASSHALDQSSPLQAT+AVHS   VL+RKFKM  EA+ VEA  FQ   ++D  KE +SG  YK+E+N     + K RKW N+ADMSS
Subjt:  LLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWVNVADMSS

Query:  RFFTMDYSHVKRRRPVHNMSLRRP
        RFFTMDY+H+KRRRPVHNMS +RP
Subjt:  RFFTMDYSHVKRRRPVHNMSLRRP

XP_022956442.1 uncharacterized protein LOC111458171 [Cucurbita moschata]1.7e-3466.41Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV
        MGLI M +LCC  L IL +PFASSHALDQSSPLQAT+AVHS   VL+RKFKM  EA+ VEA GFQ   ++D  KE +SG  YK+E+N     + K RKW 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV

Query:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        NVADMSSRFFTMDY+H+KRRRPVHNMS +RP
Subjt:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

XP_022977309.1 uncharacterized protein LOC111477668 [Cucurbita maxima]1.3e-3466.41Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV
        MGLIFM +LCC  L IL +PFASSHALDQSSPLQ T+AVHS   VL+RKFKM  EA+ VEA GFQ   ++D  KE +SG PYK+E+N     + K RKW 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV

Query:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        NVADMSSRF TMDY+H+KRRRPVHNMS +RP
Subjt:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

XP_023525366.1 uncharacterized protein LOC111788986 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-3164.39Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATD-AVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKERKW
        MGLI M +LCC  L IL +PFASSHALDQSSPLQ T+ AVHS   VL+RKFKM  EA+ VEA GFQ   ++D  KE +SG  YK+E+N     + K RKW
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATD-AVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKERKW

Query:  VNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
         NV DMSSRFFTMDY+H+KRRRPVHNMS +RP
Subjt:  VNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

TrEMBL top hitse value%identityAlignment
A0A0A0KWA1 Uncharacterized protein6.5e-3263.7Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-----RVEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKE
        MGLI M +LCC  + +LLIP ASSHALDQSSPLQAT+ VH S  VL RKFKM  EA     +VEAQGFQV  +KD  KE +SG    +E+   KL++ K 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-----RVEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKE

Query:  RKWVNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        RKWV VADMSS+ FTMDY+H+KRRRPVHNMSL+RP
Subjt:  RKWVNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

A0A5D3CCI7 Putative root meristem growth factor 81.7e-3264.44Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-----RVEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKE
        MGLI M +LCC  + ILLIP ASSHALDQSSPLQAT+AVHS   VL RKFKM  EA     RVE QGFQV  + D  KE +SG    +E+  +KL++ K 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-----RVEAQGFQVPNKKDG-KEIISGNPYKKEQNRLKLSREKE

Query:  RKWVNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        RK VNVADMSS+ FTMDY+H+KRRRPVHNMSL RP
Subjt:  RKWVNVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

A0A6J1D6T9 uncharacterized protein LOC1110175715.7e-2860.31Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-RVEAQGFQVPNKKDGKE-IISGNPYKKEQNRLKLSREKERKWV
        MGLI M  LCC  L ILLIP+ASSHAL+QS  LQAT+AV    F   RKF++  EA  V+A G  VP + D  E  +SG PYK+EQ  + LSR K RKW+
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEA-RVEAQGFQVPNKKDGKE-IISGNPYKKEQNRLKLSREKERKWV

Query:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        +V DMSSRFFTMDY H +RRRPVHNMS +RP
Subjt:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

A0A6J1GWC1 uncharacterized protein LOC1114581718.2e-3566.41Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV
        MGLI M +LCC  L IL +PFASSHALDQSSPLQAT+AVHS   VL+RKFKM  EA+ VEA GFQ   ++D  KE +SG  YK+E+N     + K RKW 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV

Query:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        NVADMSSRFFTMDY+H+KRRRPVHNMS +RP
Subjt:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

A0A6J1IR14 uncharacterized protein LOC1114776686.3e-3566.41Show/hide
Query:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV
        MGLIFM +LCC  L IL +PFASSHALDQSSPLQ T+AVHS   VL+RKFKM  EA+ VEA GFQ   ++D  KE +SG PYK+E+N     + K RKW 
Subjt:  MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEAR-VEAQGFQVPNKKD-GKEIISGNPYKKEQNRLKLSREKERKWV

Query:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP
        NVADMSSRF TMDY+H+KRRRPVHNMS +RP
Subjt:  NVADMSSRFFTMDYSHVKRRRPVHNMSLRRP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTGATATTCATGACCTTACTGTGCTGTGGTTTTCTCTCTATTCTTTTGATACCTTTTGCCTCCTCGCATGCACTGGACCAGTCTTCTCCTTTGCAAGCAACTGA
TGCAGTGCATTCTTCTAGTTTTGTTTTGGCCAGGAAGTTCAAAATGGCACCAGAAGCAAGAGTTGAAGCTCAAGGATTTCAAGTTCCCAACAAAAAAGATGGCAAGGAAA
TTATTTCAGGTAATCCCTATAAAAAGGAGCAAAACAGGCTGAAGTTAAGCAGAGAAAAGGAGAGAAAGTGGGTGAATGTGGCCGACATGTCGTCACGGTTTTTCACAATG
GACTATTCCCACGTAAAACGGCGCCGTCCTGTACATAACATGTCGCTCCGGCGTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGTTGATATTCATGACCTTACTGTGCTGTGGTTTTCTCTCTATTCTTTTGATACCTTTTGCCTCCTCGCATGCACTGGACCAGTCTTCTCCTTTGCAAGCAACTGA
TGCAGTGCATTCTTCTAGTTTTGTTTTGGCCAGGAAGTTCAAAATGGCACCAGAAGCAAGAGTTGAAGCTCAAGGATTTCAAGTTCCCAACAAAAAAGATGGCAAGGAAA
TTATTTCAGGTAATCCCTATAAAAAGGAGCAAAACAGGCTGAAGTTAAGCAGAGAAAAGGAGAGAAAGTGGGTGAATGTGGCCGACATGTCGTCACGGTTTTTCACAATG
GACTATTCCCACGTAAAACGGCGCCGTCCTGTACATAACATGTCGCTCCGGCGTCCTTGA
Protein sequenceShow/hide protein sequence
MGLIFMTLLCCGFLSILLIPFASSHALDQSSPLQATDAVHSSSFVLARKFKMAPEARVEAQGFQVPNKKDGKEIISGNPYKKEQNRLKLSREKERKWVNVADMSSRFFTM
DYSHVKRRRPVHNMSLRRP