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Sed0002954 (gene) of Chayote v1 genome

Gene IDSed0002954
OrganismSechium edule (Chayote v1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationLG01:35432600..35433161
RNA-Seq ExpressionSed0002954
SyntenySed0002954
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ONI30038.1 hypothetical protein PRUPE_1G227400 [Prunus persica]3.1e-0938.21Show/hide
Query:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK
        I  N +ES+ KRYNHLCRN  +I++ A +HEK  E+  Q  I++LK L+++K +I   N + + + + +     +V   G+KRK        +LKDPLE+
Subjt:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK

Query:  RRYKKNMKSNKASSSDHIVSPTQ
        +R K    S KAS+S  I    Q
Subjt:  RRYKKNMKSNKASSSDHIVSPTQ

PQQ03134.1 hypothetical protein Pyn_34440 [Prunus yedoensis var. nudiflora]1.6e-1041.18Show/hide
Query:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK
        +GKRYNHLCRN  +I+S A +HEK  E+  Q  I++LK LE++K ++  EN + + I + +     +V   G+KRK        RLKDPLE++R K + K
Subjt:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK

Query:  SN
        ++
Subjt:  SN

PQQ11325.1 hypothetical protein Pyn_18438 [Prunus yedoensis var. nudiflora]1.6e-1041.18Show/hide
Query:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK
        +GKRYNHLCRN  +I+S A +HEK  E+  Q  I++LK LE++K ++  EN + + I + +     +V   G+KRK        RLKDPLE++R K + K
Subjt:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK

Query:  SN
        ++
Subjt:  SN

XP_021806094.1 protein FAR1-RELATED SEQUENCE 5-like [Prunus avium]4.3e-1140.91Show/hide
Query:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK
        I  N +ES+GKRYNHLCRN  +I+S A EH K  E+  Q  I +LK LE++K ++   N + + + + +     LV   G+KRK        RLKDPLE+
Subjt:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK

Query:  RRYKKNMKSN
        +R K + K++
Subjt:  RRYKKNMKSN

XP_031741897.1 protein FAR1-RELATED SEQUENCE 5 isoform X1 [Cucumis sativus]3.1e-0965.31Show/hide
Query:  ESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHI
        +S G+RYNHLCR   QI+SLA EHEK FEH +++F+QLLKDLE+MKK++
Subjt:  ESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHI

TrEMBL top hitse value%identityAlignment
A0A0A0KLA3 Protein FAR1-RELATED SEQUENCE1.5e-0965.31Show/hide
Query:  ESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHI
        +S G+RYNHLCR   QI+SLA EHEK FEH +++F+QLLKDLE+MKK++
Subjt:  ESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHI

A0A251R1X2 Protein FAR1-RELATED SEQUENCE1.5e-0938.21Show/hide
Query:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK
        I  N +ES+ KRYNHLCRN  +I++ A +HEK  E+  Q  I++LK L+++K +I   N + + + + +     +V   G+KRK        +LKDPLE+
Subjt:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK

Query:  RRYKKNMKSNKASSSDHIVSPTQ
        +R K    S KAS+S  I    Q
Subjt:  RRYKKNMKSNKASSSDHIVSPTQ

A0A314YFY9 Uncharacterized protein8.0e-1141.18Show/hide
Query:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK
        +GKRYNHLCRN  +I+S A +HEK  E+  Q  I++LK LE++K ++  EN + + I + +     +V   G+KRK        RLKDPLE++R K + K
Subjt:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK

Query:  SN
        ++
Subjt:  SN

A0A314YSI9 Uncharacterized protein8.0e-1141.18Show/hide
Query:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK
        +GKRYNHLCRN  +I+S A +HEK  E+  Q  I++LK LE++K ++  EN + + I + +     +V   G+KRK        RLKDPLE++R K + K
Subjt:  VGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNMK

Query:  SN
        ++
Subjt:  SN

A0A6P5RSQ9 Protein FAR1-RELATED SEQUENCE2.1e-1140.91Show/hide
Query:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK
        I  N +ES+GKRYNHLCRN  +I+S A EH K  E+  Q  I +LK LE++K ++   N + + + + +     LV   G+KRK        RLKDPLE+
Subjt:  ISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEK

Query:  RRYKKNMKSN
        +R K + K++
Subjt:  RRYKKNMKSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACGAGATAAGTGGAAATTTTAGAGAGTCGGTTGGAAAACGCTATAACCATTTATGTCGTAATGCTAGTCAAATTAGTTCACTAGCAACAGAGCATGAAAAGTTTTT
TGAGCATGCAACACAAAGTTTTATTCAATTGCTCAAAGATTTGGAGAAGATGAAGAAACATATTTTGGTGGAAAACGATAACACAAACAATATAGATGATTCAAGTTTCA
TTGGAGATAATCTTGTGGAAGCACGTGGAATTAAGAGAAAGCCTCTTTGTTGGTCGTCCTCGTGTCGATTGAAAGATCCACTTGAAAAGAGGAGATACAAAAAGAATATG
AAGTCAAACAAAGCTTCTTCGTCCGATCATATTGTATCCCCCACACAGAACAATACTAAGGAGAAAGATACACAAACCATGTCTACGTTGCCGATCACGAACCAACAAAT
AGTATCCATGAATAGGCAAACTAACATGCCATTCATTCAATTACCTGAG
mRNA sequenceShow/hide mRNA sequence
ATGCACGAGATAAGTGGAAATTTTAGAGAGTCGGTTGGAAAACGCTATAACCATTTATGTCGTAATGCTAGTCAAATTAGTTCACTAGCAACAGAGCATGAAAAGTTTTT
TGAGCATGCAACACAAAGTTTTATTCAATTGCTCAAAGATTTGGAGAAGATGAAGAAACATATTTTGGTGGAAAACGATAACACAAACAATATAGATGATTCAAGTTTCA
TTGGAGATAATCTTGTGGAAGCACGTGGAATTAAGAGAAAGCCTCTTTGTTGGTCGTCCTCGTGTCGATTGAAAGATCCACTTGAAAAGAGGAGATACAAAAAGAATATG
AAGTCAAACAAAGCTTCTTCGTCCGATCATATTGTATCCCCCACACAGAACAATACTAAGGAGAAAGATACACAAACCATGTCTACGTTGCCGATCACGAACCAACAAAT
AGTATCCATGAATAGGCAAACTAACATGCCATTCATTCAATTACCTGAG
Protein sequenceShow/hide protein sequence
MHEISGNFRESVGKRYNHLCRNASQISSLATEHEKFFEHATQSFIQLLKDLEKMKKHILVENDNTNNIDDSSFIGDNLVEARGIKRKPLCWSSSCRLKDPLEKRRYKKNM
KSNKASSSDHIVSPTQNNTKEKDTQTMSTLPITNQQIVSMNRQTNMPFIQLPE