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Sed0002977 (gene) of Chayote v1 genome

Gene IDSed0002977
OrganismSechium edule (Chayote v1)
DescriptionProtochlorophyllide reductase
Genome locationLG01:4089567..4089989
RNA-Seq ExpressionSed0002977
SyntenySed0002977
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053319.1 uncharacterized protein E6C27_scaffold102G001420 [Cucumis melo var. makuwa]2.8e-2159.82Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL
        MWR+ A IRP L   T+ HR+ADE+MFTTT    TYAAA N+     RR+FS A+F IIRAPFS ILSCFAPP  H   +  WLSG  YF+ T    NHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL

Query:  MVSDGMRYAIFV
        MVSDGMRYAI +
Subjt:  MVSDGMRYAIFV
XP_008455967.1 PREDICTED: uncharacterized protein LOC103496030 [Cucumis melo]2.8e-2159.82Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL
        MWR+ A IRP L   T+ HR+ADE+MFTTT    TYAAA N+     RR+FS A+F IIRAPFS ILSCFAPP  H   +  WLSG  YF+ T    NHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL

Query:  MVSDGMRYAIFV
        MVSDGMRYAI +
Subjt:  MVSDGMRYAIFV
XP_022944204.1 uncharacterized protein LOC111448722 [Cucurbita moschata]2.5e-2563.39Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL
        MWRLIAA+RP L   T+ HRVADE+MFTTT    YA A++HHRR  A  R+ +AVF IIRAPFS ILSCFAPPP H  A+  WLS   YF    S+TNHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL

Query:  MVSDGMRYAIFV
        MVSDGMRYA+ +
Subjt:  MVSDGMRYAIFV
XP_022985817.1 uncharacterized protein LOC111483748 [Cucurbita maxima]8.5e-2664.29Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL
        MWRLIAA+RP L   T+ HRVADE+MFTTT    YA A++HH R  A  R+FSAVF IIRAPFS ILSCFAPPP H  A+  WLS   YF    S+TNHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL

Query:  MVSDGMRYAIFV
        MVSDGMRYA+ +
Subjt:  MVSDGMRYAIFV
XP_023513038.1 uncharacterized protein LOC111777603 [Cucurbita pepo subsp. pepo]1.1e-2563.72Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR---AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNH
        MWRLIAA+RP L   T+ HRVADE+MFTTT    YA A++HH R   A  R+FSAVF IIRAPFS ILSCFAPPP H  A+  WLS   YF    S+TNH
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR---AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNH

Query:  LMVSDGMRYAIFV
        LMVSDGMRYA+ +
Subjt:  LMVSDGMRYAIFV
TrEMBL top hitse value%identityAlignment
A0A1S3C290 uncharacterized protein LOC1034960301.4e-2159.82Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL
        MWR+ A IRP L   T+ HR+ADE+MFTTT    TYAAA N+     RR+FS A+F IIRAPFS ILSCFAPP  H   +  WLSG  YF+ T    NHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL

Query:  MVSDGMRYAIFV
        MVSDGMRYAI +
Subjt:  MVSDGMRYAIFV
A0A5A7UIL8 Uncharacterized protein1.4e-2159.82Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL
        MWR+ A IRP L   T+ HR+ADE+MFTTT    TYAAA N+     RR+FS A+F IIRAPFS ILSCFAPP  H   +  WLSG  YF+ T    NHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL

Query:  MVSDGMRYAIFV
        MVSDGMRYAI +
Subjt:  MVSDGMRYAIFV
A0A5D3CJA9 Uncharacterized protein1.4e-2159.82Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL
        MWR+ A IRP L   T+ HR+ADE+MFTTT    TYAAA N+     RR+FS A+F IIRAPFS ILSCFAPP  H   +  WLSG  YF+ T    NHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT----TYAAADNHHRRAVRRSFS-AVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDT----NHL

Query:  MVSDGMRYAIFV
        MVSDGMRYAI +
Subjt:  MVSDGMRYAIFV
A0A6J1FWB0 uncharacterized protein LOC1114487221.2e-2563.39Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL
        MWRLIAA+RP L   T+ HRVADE+MFTTT    YA A++HHRR  A  R+ +AVF IIRAPFS ILSCFAPPP H  A+  WLS   YF    S+TNHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL

Query:  MVSDGMRYAIFV
        MVSDGMRYA+ +
Subjt:  MVSDGMRYAIFV
A0A6J1J5Y3 uncharacterized protein LOC1114837484.1e-2664.29Show/hide
Query:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL
        MWRLIAA+RP L   T+ HRVADE+MFTTT    YA A++HH R  A  R+FSAVF IIRAPFS ILSCFAPPP H  A+  WLS   YF    S+TNHL
Subjt:  MWRLIAAIRPGL---TDRHRVADETMFTTT---TYAAADNHHRR--AVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYF----SDTNHL

Query:  MVSDGMRYAIFV
        MVSDGMRYA+ +
Subjt:  MVSDGMRYAIFV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G04795.1 unknown protein1.4e-0536.54Show/hide
Query:  MWRLIAAIRPGLTDRH---RVADETMFTTTTYAAADNHHRRAVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSG-HRYFSDTNHLMVSDGMRY
        M ++++ +R  L +     RVADE+   +TT     N        S      I++ P S I+SCF+  P    A+GVW+SG +   S+ NHLMV DGMRY
Subjt:  MWRLIAAIRPGLTDRH---RVADETMFTTTTYAAADNHHRRAVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSG-HRYFSDTNHLMVSDGMRY

Query:  AIFV
        A+ +
Subjt:  AIFV
AT5G35732.1 unknown protein7.0e-1040.38Show/hide
Query:  MWRLIAAIRPGLTDRH---RVADETMFTTTTYAAADNHHRRAVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSG-HRYFSDTNHLMVSDGMRY
        M ++++ +R  L +     RVAD+T   ++T  A         R  F++V  I+R PFS I+SCFA  P   G +G+W+SG +   S+ NHLMVSD MRY
Subjt:  MWRLIAAIRPGLTDRH---RVADETMFTTTTYAAADNHHRRAVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSG-HRYFSDTNHLMVSDGMRY

Query:  AIFV
        AI +
Subjt:  AIFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGCGGCTGATAGCAGCAATCCGCCCCGGCCTCACCGACCGCCACCGCGTCGCCGATGAAACCATGTTCACAACAACCACCTACGCCGCCGCCGATAATCACCACCG
CCGTGCCGTCCGCCGCAGCTTCTCCGCCGTCTTCCGCATCATTCGTGCTCCTTTCTCTAATATTCTCTCTTGCTTCGCTCCTCCTCCCTCCCACGGCGGCGCCAACGGCG
TTTGGCTCTCCGGCCACCGCTATTTTTCCGATACCAACCACCTTATGGTAAGCGATGGCATGCGCTATGCCATATTCGTGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAACAAAAAACAAAACCCCCCCCTTTTTTTTTCTCTTCACTTTTCTTTAAAAAAATCATGTGGCGGCTGATAGCAGCAATCCGCCCCGGCCTCACCGACCGCCACCG
CGTCGCCGATGAAACCATGTTCACAACAACCACCTACGCCGCCGCCGATAATCACCACCGCCGTGCCGTCCGCCGCAGCTTCTCCGCCGTCTTCCGCATCATTCGTGCTC
CTTTCTCTAATATTCTCTCTTGCTTCGCTCCTCCTCCCTCCCACGGCGGCGCCAACGGCGTTTGGCTCTCCGGCCACCGCTATTTTTCCGATACCAACCACCTTATGGTA
AGCGATGGCATGCGCTATGCCATATTCGTGTAAATGACCCTACAAAAATTGTTAAAAATCTTAACTTTAGCTTTTTGTATATTTCATTTCTAG
Protein sequenceShow/hide protein sequence
MWRLIAAIRPGLTDRHRVADETMFTTTTYAAADNHHRRAVRRSFSAVFRIIRAPFSNILSCFAPPPSHGGANGVWLSGHRYFSDTNHLMVSDGMRYAIFV