; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0002987 (gene) of Chayote v1 genome

Gene IDSed0002987
OrganismSechium edule (Chayote v1)
DescriptionUvrABC system protein C
Genome locationLG04:36618988..36619426
RNA-Seq ExpressionSed0002987
SyntenySed0002987
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7013803.1 hypothetical protein SDJN02_23970, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1464.86Show/hide
Query:  MGNLVGKKSRQMIHPIECHEGPTS-SRPLRIKVVMTRNHLKQLMAMAD----DDLGHLILKECCKGNLQPRFVT
        MGN +GK  R++IHPIE HEG  S SRPLRIKVVMTRN LK+LMAMAD    DDL  LIL+ECC+G    R +T
Subjt:  MGNLVGKKSRQMIHPIECHEGPTS-SRPLRIKVVMTRNHLKQLMAMAD----DDLGHLILKECCKGNLQPRFVT
XP_011468894.1 PREDICTED: uncharacterized protein LOC105352819 [Fragaria vesca subsp. vesca]6.5e-0440.79Show/hide
Query:  MGNLVGKKSRQMIHPIECHEG----PTSSRPLRIKVVMTRNHLKQLMAMAD---------DDLGHLILKECCKGNL
        MGN  G K   ++HP++ +EG    P+ +  LR+KV MT+  LK+LMA  D         ++LG +IL+EC KG L
Subjt:  MGNLVGKKSRQMIHPIECHEG----PTSSRPLRIKVVMTRNHLKQLMAMAD---------DDLGHLILKECCKGNL
XP_024197720.1 uncharacterized protein LOC112200945 [Rosa chinensis]5.0e-0441.98Show/hide
Query:  MGNLVGKKSRQMIHPIECHE---GPTSSRPLRIKVVMTRNHLKQLMAMAD--------DDLGHLILKECCKGNLQPRFVTL
        MGN VGK+  + +HP++  E   G  S+  +RIK+ MT+  LK+LMA  D        ++LG LILKEC +G L  R V +
Subjt:  MGNLVGKKSRQMIHPIECHE---GPTSSRPLRIKVVMTRNHLKQLMAMAD--------DDLGHLILKECCKGNLQPRFVTL
TrEMBL top hitse value%identityAlignment
A0A6A3AHV7 UvrABC system protein C2.4e-0444.16Show/hide
Query:  MGNLVGKKSRQMIHPIECHEGPTS-SRPLRIKVVMTRNHLKQLMAMADD------DLGHLILKECCKGNLQPRFVTL
        MGN  G +S+ M+   E  +   S S P RIKV MT+  LK+L A A D      +LG LI+KEC +G L PR V +
Subjt:  MGNLVGKKSRQMIHPIECHEGPTS-SRPLRIKVVMTRNHLKQLMAMADD------DLGHLILKECCKGNLQPRFVTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAATTTAGTGGGAAAAAAAAGCAGGCAGATGATTCACCCAATTGAGTGCCACGAAGGACCGACAAGTTCGAGGCCTTTAAGGATCAAAGTAGTAATGACTAGGAA
CCACCTTAAGCAGCTCATGGCTATGGCTGATGATGATTTAGGCCACTTGATCCTCAAAGAATGTTGCAAAGGTAACTTACAACCTCGTTTTGTAACTCTTACTTAA
mRNA sequenceShow/hide mRNA sequence
AAATCTCAATACAATAATAATTCTCCAGTTCTAAGAACACAGACACATCAGAGATGGGAAATTTAGTGGGAAAAAAAAGCAGGCAGATGATTCACCCAATTGAGTGCCAC
GAAGGACCGACAAGTTCGAGGCCTTTAAGGATCAAAGTAGTAATGACTAGGAACCACCTTAAGCAGCTCATGGCTATGGCTGATGATGATTTAGGCCACTTGATCCTCAA
AGAATGTTGCAAAGGTAACTTACAACCTCGTTTTGTAACTCTTACTTAATTTAGGGTTTGGTTGAAAATCAAACATATCCTTTAATTCTACCTTATAATACAAGAATTTT
TAGTTCTGGTTAGAGGTTTTACCTTCATAAAAATAAATCTTGAGCTATAGATCTAGAACTCTCTTCTACAAAATTTTATAAATAATATGTGTTGTATATTTCTCAAATA
Protein sequenceShow/hide protein sequence
MGNLVGKKSRQMIHPIECHEGPTSSRPLRIKVVMTRNHLKQLMAMADDDLGHLILKECCKGNLQPRFVTLT