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Sed0002993 (gene) of Chayote v1 genome

Gene IDSed0002993
OrganismSechium edule (Chayote v1)
Descriptionprotein SOB FIVE-LIKE 6-like
Genome locationLG13:23112080..23113408
RNA-Seq ExpressionSed0002993
SyntenySed0002993
Gene Ontology termsGO:0009691 - cytokinin biosynthetic process (biological process)
GO:0009736 - cytokinin-activated signaling pathway (biological process)
InterPro domainsIPR044670 - SOB-five-Like (SOFL) family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008452653.1 PREDICTED: uncharacterized protein LOC103493609 [Cucumis melo]7.2e-5367.91Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHG-SGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA
        MNDWSA HYCSG ESGWTMYLDQSYTS H  +GGSG      G ++Y+ KEAK R EEEED EEEDLSMVSDASSGPPHYIED+EE FYNNG S YAISA
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHG-SGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA

Query:  SKSATKKS---KQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP
        S+   KKS   K+NGR QQH+YLDDTASSPVYGY KA+KIN A+S +ALE+N  +FSQGFSATHFK    ++ H  L +++ EK  P
Subjt:  SKSATKKS---KQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP

XP_011654154.1 uncharacterized protein LOC105435311 [Cucumis sativus]1.3e-4964.32Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAK-VRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA
        MNDWSA+HYCSG ESGWTMYLDQSYTS H   G   G GR  G++Y+ K AK  +A +EE++EEEDLSMVSDASSGPPHYIED+EE FYNNG S + ISA
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAK-VRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA

Query:  S---KSATKKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK-VIKFHFNLRYHQFEKVFP
        S   +  +KK KQNGR QQH+YLDDTASSPVYGY KA+KI AA++ +ALE++  +FSQGFSATHFK    F  +L +++ EK  P
Subjt:  S---KSATKKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK-VIKFHFNLRYHQFEKVFP

XP_022139584.1 uncharacterized protein LOC111010447 isoform X1 [Momordica charantia]7.2e-5371.01Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS
        MNDWS+AHYCSGGESGWTMYLDQSY S+H  GG G       G++YREKEAKVR EEE  +EEEDLSMVSDASSGPPHY+ED+E Y YNNG S YA SA+
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS

Query:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK
        +SA        KK K++GR QQH+YLDDTASSPVYGY KASKINAA S EA E+N  +FSQGFSATHFK
Subjt:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK

XP_022139592.1 uncharacterized protein LOC111010447 isoform X2 [Momordica charantia]1.5e-5069.82Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS
        MNDWS+AHYCSGGESGWTMYLDQSY S+H  GG G       G++YREKEAKVR EEE  +EEEDLSMVSDASSGPPHY+ED+E Y YNNG S YA SA+
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS

Query:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK
        +SA        KK K++GR QQH+YLDDTASSPVYGY K  KINAA S EA E+N  +FSQGFSATHFK
Subjt:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK

XP_038897152.1 protein SOB FIVE-LIKE 6-like [Benincasa hispida]6.8e-5164.25Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS
        MNDWS+ HYCSG ESGWTMYLDQSYTS H   GSG  GG   G++Y+ KEAK R E+E  +EEEDLSMVSDASSGPPHYIED+EE FY NG S YA SAS
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS

Query:  KSAT----------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP
        +SA           KK KQNGR QQH+YLDDTASSPVYGY+K SKIN A S +ALE+N  +FSQGFSATHFK    ++ H  L +++ EK  P
Subjt:  KSAT----------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP

TrEMBL top hitse value%identityAlignment
A0A0A0KZY5 Uncharacterized protein6.2e-5064.32Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAK-VRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA
        MNDWSA+HYCSG ESGWTMYLDQSYTS H   G   G GR  G++Y+ K AK  +A +EE++EEEDLSMVSDASSGPPHYIED+EE FYNNG S + ISA
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAK-VRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA

Query:  S---KSATKKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK-VIKFHFNLRYHQFEKVFP
        S   +  +KK KQNGR QQH+YLDDTASSPVYGY KA+KI AA++ +ALE++  +FSQGFSATHFK    F  +L +++ EK  P
Subjt:  S---KSATKKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK-VIKFHFNLRYHQFEKVFP

A0A1S3BVI5 uncharacterized protein LOC1034936093.5e-5367.91Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHG-SGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA
        MNDWSA HYCSG ESGWTMYLDQSYTS H  +GGSG      G ++Y+ KEAK R EEEED EEEDLSMVSDASSGPPHYIED+EE FYNNG S YAISA
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHG-SGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA

Query:  SKSATKKS---KQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP
        S+   KKS   K+NGR QQH+YLDDTASSPVYGY KA+KIN A+S +ALE+N  +FSQGFSATHFK    ++ H  L +++ EK  P
Subjt:  SKSATKKS---KQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP

A0A5D3D989 Uncharacterized protein3.5e-5367.91Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHG-SGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA
        MNDWSA HYCSG ESGWTMYLDQSYTS H  +GGSG      G ++Y+ KEAK R EEEED EEEDLSMVSDASSGPPHYIED+EE FYNNG S YAISA
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHG-SGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISA

Query:  SKSATKKS---KQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP
        S+   KKS   K+NGR QQH+YLDDTASSPVYGY KA+KIN A+S +ALE+N  +FSQGFSATHFK    ++ H  L +++ EK  P
Subjt:  SKSATKKS---KQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK---VIKFHFNLRYHQFEKVFP

A0A6J1CDG6 uncharacterized protein LOC111010447 isoform X13.5e-5371.01Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS
        MNDWS+AHYCSGGESGWTMYLDQSY S+H  GG G       G++YREKEAKVR EEE  +EEEDLSMVSDASSGPPHY+ED+E Y YNNG S YA SA+
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS

Query:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK
        +SA        KK K++GR QQH+YLDDTASSPVYGY KASKINAA S EA E+N  +FSQGFSATHFK
Subjt:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK

A0A6J1CED8 uncharacterized protein LOC111010447 isoform X27.3e-5169.82Show/hide
Query:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS
        MNDWS+AHYCSGGESGWTMYLDQSY S+H  GG G       G++YREKEAKVR EEE  +EEEDLSMVSDASSGPPHY+ED+E Y YNNG S YA SA+
Subjt:  MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISAS

Query:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK
        +SA        KK K++GR QQH+YLDDTASSPVYGY K  KINAA S EA E+N  +FSQGFSATHFK
Subjt:  KSAT-------KKSKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFK

SwissProt top hitse value%identityAlignment
Q8L9K4 Protein SOB FIVE-LIKE 53.2e-1136.54Show/hide
Query:  SGGESGWTMYLDQSYTSQHGSGGSGSGG--GRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISASKSATKKSK
        SG ESGWT+YLDQS +S   S    S G   RR  K   ++       +EE+EEE+DLSM+SDASSGP +  E+      N       +   K   ++ K
Subjt:  SGGESGWTMYLDQSYTSQHGSGGSGSGG--GRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISASKSATKKSK

Query:  QNGRIQQHTYLDDTASSPVYGYAKASKINAASSK--EALEKNTAEFSQGFSATHFK
        +    + ++ LDDTASSP++ +    + +   +K  +   ++T ++SQGFSAT F+
Subjt:  QNGRIQQHTYLDDTASSPVYGYAKASKINAASSK--EALEKNTAEFSQGFSATHFK

Arabidopsis top hitse value%identityAlignment
AT1G58460.1 unknown protein1.0e-0432.3Show/hide
Query:  DWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIED--HEEYFYNNGNS-CYAISA
        D+S   Y   G+SGWTMYL       H S  S        G             E + E +ED SMVSDASSGPP+Y E+  HE++   N    C + S 
Subjt:  DWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIED--HEEYFYNNGNS-CYAISA

Query:  SKSATKK---SKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFS
        +K+  KK    +Q    + ++  DDTASS   G     +++A    +   +   +F Q +S
Subjt:  SKSATKK---SKQNGRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFS

AT4G33800.1 unknown protein2.3e-1236.54Show/hide
Query:  SGGESGWTMYLDQSYTSQHGSGGSGSGG--GRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISASKSATKKSK
        SG ESGWT+YLDQS +S   S    S G   RR  K   ++       +EE+EEE+DLSM+SDASSGP +  E+      N       +   K   ++ K
Subjt:  SGGESGWTMYLDQSYTSQHGSGGSGSGG--GRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISASKSATKKSK

Query:  QNGRIQQHTYLDDTASSPVYGYAKASKINAASSK--EALEKNTAEFSQGFSATHFK
        +    + ++ LDDTASSP++ +    + +   +K  +   ++T ++SQGFSAT F+
Subjt:  QNGRIQQHTYLDDTASSPVYGYAKASKINAASSK--EALEKNTAEFSQGFSATHFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATGATTGGTCTGCTGCACATTATTGCAGTGGAGGTGAATCAGGTTGGACAATGTACTTGGACCAATCCTATACTTCACAACACGGTTCGGGCGGCAGCGGCAGCGG
CGGAGGCAGACGCGGAGGCAAGAGTTATAGGGAAAAAGAAGCAAAAGTAAGAGCAGAGGAAGAAGAGGATGAAGAAGAAGAAGATCTATCAATGGTGTCTGATGCTTCTT
CAGGTCCACCACATTACATTGAGGACCATGAAGAATACTTTTACAATAATGGGAATTCTTGTTATGCCATTTCAGCTTCAAAATCAGCAACAAAAAAGAGCAAACAAAAT
GGAAGAATTCAGCAACATACTTATCTTGATGACACTGCTAGCTCCCCTGTATATGGCTATGCCAAAGCAAGTAAAATCAATGCAGCATCAAGCAAAGAAGCTTTGGAGAA
GAATACTGCAGAGTTTTCTCAGGGATTTTCTGCTACTCACTTTAAGGTAATTAAATTCCACTTTAATTTGAGATACCATCAATTTGAAAAGGTTTTTCCATGTCTTAATA
ATTCAAAAGTGAAAATTTTTGAACACAGAGAAAATCAGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATCCCCCCAAAGCCTAAACTACTGAATTGTCACCATGAATGATTGGTCTGCTGCACATTATTGCAGTGGAGGTGAATCAGGTTGGACAATGTACTTGGACCAATCCTATA
CTTCACAACACGGTTCGGGCGGCAGCGGCAGCGGCGGAGGCAGACGCGGAGGCAAGAGTTATAGGGAAAAAGAAGCAAAAGTAAGAGCAGAGGAAGAAGAGGATGAAGAA
GAAGAAGATCTATCAATGGTGTCTGATGCTTCTTCAGGTCCACCACATTACATTGAGGACCATGAAGAATACTTTTACAATAATGGGAATTCTTGTTATGCCATTTCAGC
TTCAAAATCAGCAACAAAAAAGAGCAAACAAAATGGAAGAATTCAGCAACATACTTATCTTGATGACACTGCTAGCTCCCCTGTATATGGCTATGCCAAAGCAAGTAAAA
TCAATGCAGCATCAAGCAAAGAAGCTTTGGAGAAGAATACTGCAGAGTTTTCTCAGGGATTTTCTGCTACTCACTTTAAGGTAATTAAATTCCACTTTAATTTGAGATAC
CATCAATTTGAAAAGGTTTTTCCATGTCTTAATAATTCAAAAGTGAAAATTTTTGAACACAGAGAAAATCAGCAATGAGGAAACACTTTGGTTTTTATGGCTCTGAAAAA
TCTGCACCAGAAGAATGAGGGTGCTTGCAATTCTACCGCAGCTTCGCCTTTTTTTTGGGTCGTCGAGTAAATGATGACGACATGTTTTTTTTAGTTCAACAATAATTGGA
GTGAAGGATTCGAATTCATATCCTCTTAGTCATGGACACACGTTTATGTCGGTTGAACTATTGCTCTCGTTGGCGTAACACCATGTTATATATCAGAGGGATATTCTTGC
TTTTGATATTATTCTTATTTTCAATTTAATTTCCCACTACTGTTTTAGGCTTGTGTGCTTCTCTTTTCCACGTTCTTGTCAATGCAATGGGAAACAGGAACCACTAAAAA
AATCAAGAAAAAAACAAGGTTTGTTGCATATATCTTAAATCTTAGCTACTATTTTCAGG
Protein sequenceShow/hide protein sequence
MNDWSAAHYCSGGESGWTMYLDQSYTSQHGSGGSGSGGGRRGGKSYREKEAKVRAEEEEDEEEEDLSMVSDASSGPPHYIEDHEEYFYNNGNSCYAISASKSATKKSKQN
GRIQQHTYLDDTASSPVYGYAKASKINAASSKEALEKNTAEFSQGFSATHFKVIKFHFNLRYHQFEKVFPCLNNSKVKIFEHRENQQ