CuGenDBv2

Gene ID	Sed0003006
Organism	Sechium edule (Chayote v1)
Description	Transcription initiation factor IIF subunit alpha
Genome location	LG05:1105399..1117289
RNA-Seq Expression	Sed0003006
Synteny	Sed0003006
Gene Ontology terms	GO:0006367 - transcription initiation from RNA polymerase II promoter (biological process) GO:0006413 - translational initiation (biological process) GO:0032968 - positive regulation of transcription elongation from RNA polymerase II promoter (biological process) GO:0005674 - transcription factor TFIIF complex (cellular component) GO:0001096 - TFIIF-class transcription factor complex binding (molecular function) GO:0003677 - DNA binding (molecular function) GO:0003743 - translation initiation factor activity (molecular function) GO:0008168 - methyltransferase activity (molecular function) GO:0016251 - RNA polymerase II general transcription initiation factor activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004152016.1 transcription initiation factor IIF subunit alpha isoform X1 [Cucumis sativus]

9.8e-270

92.96

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATV+RLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDKE+ G SGRGR+K+TGDE EGNVSDRGEEDEEEEAARKN+LGL+KKGGGDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD D  E+ GGTPVLPSKQKDTVKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE K+TD GV  SK+TASKGA ASVKTEP   SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

XP_016900419.1 PREDICTED: LOW QUALITY PROTEIN: transcription initiation factor IIF subunit alpha [Cucumis melo]

3.7e-269

92.96

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATV+RLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDKE+ G SGRGR+K+TGDE EGNVSDRGEEDEEEEAARKN+LGL+KKGGGDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDD D  E+ GGTPVLPSKQKDTVKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE K TD GV  SK+TASKGA ASVKTEP   SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQK +GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

XP_022931161.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita moschata]

4.9e-269

92.78

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATV+RLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDK+S GA+GRGR+K T DE EGNVSDRGEEDEEEEAARKN+LGLNKKGGGDDDDEEGPRGG+ D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE ++DDDDDDAEEE GGTPV PSKQKD VKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        P PSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE KSTD GVS S++TASKGAAASVKTEP  ASGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

XP_023532767.1 transcription initiation factor IIF subunit alpha-like isoform X1 [Cucurbita pepo subsp. pepo]

1.3e-269

92.59

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        M  DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATV+RLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDK+S GA+GRGR+K T D+ EGNVSDRGE DEEEEAARKN+LGLNKKGGGDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLL+RTGGLNDSDGEDDDDDDDDDAEEE GGTPV PSKQKD VKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        P PSGSAKG  S+AKTAKGKRKNGEDVKPSSAPPKKMKTETE KSTD GVS S++TASKGAAASVKTEP  ASGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

XP_038888042.1 transcription initiation factor IIF subunit alpha isoform X1 [Benincasa hispida]

6.8e-271

93.14

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MSFDL+LKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATV+RLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSL K+GL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDKE  G SGRGR+K TGDE EGNVSDRGEEDEEEEA RKN+LGLNKKGGGDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD D  E+ GGTPVLPSKQKDTVKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTDGVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKFK
        PTPSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE KSTD VS SK+TASKGA A VKTEP   SGPVTEEEIRAVLRQRTPVTTQDLVAKFK
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTDGVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKFK

Query:  ARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        ARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  ARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LCA6 Transcription initiation factor IIF subunit alpha

4.8e-270

92.96

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MSFDLLLK SCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATV+RLIREYNVRASAS+DKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDKE+ G SGRGR+K+TGDE EGNVSDRGEEDEEEEAARKN+LGL+KKGGGDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDD D  E+ GGTPVLPSKQKDTVKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE K+TD GV  SK+TASKGA ASVKTEP   SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

A0A1S4DWR2 Transcription initiation factor IIF subunit alpha

1.8e-269

92.96

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATV+RLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAE KMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDKE+ G SGRGR+K+TGDE EGNVSDRGEEDEEEEAARKN+LGL+KKGGGDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDD+DDDD D  E+ GGTPVLPSKQKDTVKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        PTPSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE K TD GV  SK+TASKGA ASVKTEP   SGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQK +GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

A0A6J1E3E1 Transcription initiation factor IIF subunit alpha

3.7e-262

90.39

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MSFDLLLKPSCSGCGS+T+LYGSNCKHMTLCLTCGKTMAENKGKCYDCGATV+RLIREYNVRASASSDKNYFIGRFMSGLPNFS+KRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQL+DALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDK++ GASGRGR+K+TGDE EGN SDRGEEDEEEEAARKN+LGLNKK  GDDDDEEGPRGGD D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDE+DEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE  DDDDDDD EE+IGGTPV+ SKQKDTVKEEAAA+SPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRK-NGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAK
        P PSGS+KG PSS K +KGKRK NG+DVKPS+ PPKK+KTET+ KSTD GVS SK+TASKGA ASVKTE  L SGPVTEEEIRAVLRQRTPVTTQDLVAK
Subjt:  PTPSGSAKGAPSSAKTAKGKRK-NGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAK

Query:  FKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        FKARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  FKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

A0A6J1ESX1 Transcription initiation factor IIF subunit alpha

2.4e-269

92.78

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL CGKTMAENKGKCYDCGATV+RLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET
        GPAAFGEV+KFDDK+S GA+GRGR+K T DE EGNVSDRGEEDEEEEAARKN+LGLNKKGGGDDDDEEGPRGG+ D DDDD+EKGDDWEHEEIFTDDDET
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDET

Query:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK
        TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGE ++DDDDDDAEEE GGTPV PSKQKD VKEEAAANSPSK
Subjt:  TAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSK

Query:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF
        P PSGSAKG PS+AKTAKGKRKNGEDVKPSSAPPKKMKTETE KSTD GVS S++TASKGAAASVKTEP  ASGPVTEEEIRAVLRQRTPVTTQDLVAKF
Subjt:  PTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKF

Query:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  KARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

A0A6J1K1N5 Transcription initiation factor IIF subunit alpha

8.4e-267

92.07

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MS DLLLKPSCSGCGSTTELYGSNCKHMTLCL+CGKTMAENKGKCYDCGATV+RLIREYNVRAS+SSDKNYFIGRFMSGLPNFSKKRNAENKWSL KEGL
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQLTDALREKYKNRPWLLEDETGQ QFQGHLEGSQSATYYLLV+QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEK-GDDWEHEEIFTDDDE
        GPAAFGEV+KFDDK+S GA+GRGR+K T DE EGNVSDRGEEDEEEEAARKN+LGLNKKGGGDDDDEEGPRGGD D DDDD+E  GDDWEHEEIFTDDDE
Subjt:  GPAAFGEVDKFDDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEK-GDDWEHEEIFTDDDE

Query:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSP
        TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR+GGLNDSDG E++DDDDDDDAEEE GGTPV PSKQKD VKEEAAANSP
Subjt:  TTAPDREEREDLAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDG-EDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSP

Query:  SKPTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVA
        SKP PSGSAKG  S+AKTAKGKRKNGEDVKPSSAPPKKMKTETE KSTD G+S S++TASKGAAASVKTEP  ASGPVTEEEIRAVLRQRTPVTTQDLVA
Subjt:  SKPTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTETEPKSTD-GVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVA

Query:  KFKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED
        KFKARLR  EDKNAFAEILRRISRIQKT+GGPSYVVLRKPED
Subjt:  KFKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

SwissProt top hits

e value

%identity

Alignment

Q54WV4 General transcription factor IIF subunit 1

7.9e-12

26.19

Show/hide

Query:  KNRPWLLEDETGQFQFQGHLEGSQSATYYLLVM--QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKF
        K  PW LED  G   +QG++EG+Q+++ Y L M        A+P   WYNF    +++ LT EEAE+ MK + +  D +   + K     P+  G     
Subjt:  KNRPWLLEDETGQFQFQGHLEGSQSATYYLLVM--QGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKF

Query:  DDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREEREDL
             +G S    KKS  +  E    +R E+    +   + K    KK       E    G   D D  D E   D + ++ + D D  T  D       
Subjt:  DDKESAGASGRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREEREDL

Query:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR--------------------TGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQ------
                +I++DEE+ED +      L++ G E+KK++++                     GG    D EDDD+DD+D  ++++   P +  K       
Subjt:  APEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRR--------------------TGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQ------

Query:  KDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGK-RKNGEDVKPSSAPPKKMKTETEPKSTDGVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVL
          +VK+E      SK +     K   SS K+ + K +KN  D    +   KK+K   EP S   V  + + + +        +P     P TEE I+ VL
Subjt:  KDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGK-RKNGEDVKPSSAPPKKMKTETEPKSTDGVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVL

Query:  RQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSG
        ++   V + DL+  FK  L+  ++K  F  ++  ++R+ + +G
Subjt:  RQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSG

Q9SU25 Transcription initiation factor IIF subunit alpha

1.3e-184

68.12

Show/hide

Query:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL
        MS  L L  SC GCGS ++LYGS+C+HMTLCL CG+TMA+NK KC++CG  V+RLIREYNVRA+A +DKNYFIGRF++GLPNF  K+ +ENKWSL K+  
Subjt:  MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGL

Query:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN
        QGRQ TDA REK KN+PW+LEDETGQFQ+QGHLEGSQSATYYLLVMQ KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+N
Subjt:  QGRQLTDALREKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASN

Query:  GPAAFGEVDKFDDKESAGAS---GRGRKKST-GDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTD
        GPA FGEVD  ++KES G S   GRGRKKS+ GDE EGNVSDRG+EDEEEEA+RK++LGLN+K   DDDDEEGPRGGDLD DDDD+EKGDDWEHEEIFTD
Subjt:  GPAAFGEVDKFDDKESAGAS---GRGRKKST-GDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTD

Query:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAA
        DDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSKSGKELKKLL +  GL++SD  +DDDDD DD EE   GT V  SKQK+  KEE   
Subjt:  DDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAA

Query:  NSPSKPTPSGSAKGAPSSAKTAKGKRK--NGEDVKPSSAPPKKMKTETEPKST-DGVSASKATASKGAAASVKTEP--------GLASGPVTEEEIRAVL
        N+P+KP PSG  +G P  AK +KGKRK  +G+  KPSS+  KK+KTE +PKS+     A+  + S     +VK EP          A+GPVTE+EIRAVL
Subjt:  NSPSKPTPSGSAKGAPSSAKTAKGKRK--NGEDVKPSSAPPKKMKTETEPKST-DGVSASKATASKGAAASVKTEP--------GLASGPVTEEEIRAVL

Query:  RQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRK
         ++  VTTQDLV++FKARL+  EDKNAFA ILR+IS+IQK +G  ++VVLR+
Subjt:  RQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRK

Arabidopsis top hits

e value

%identity

Alignment

AT4G12610.1 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

5.3e-120

66.58

Show/hide

Query:  MQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKFDDKESAGAS---GRGRKKST-GDEYEGNVSDRGE
        MQ KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEVD  ++KES G S   GRGRKKS+ GDE EGNVSDRG+
Subjt:  MQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKFDDKESAGAS---GRGRKKST-GDEYEGNVSDRGE

Query:  EDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK++LGLN+K   DDDDEEGPRGGDLD DDDD+EKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGKRK--NGEDVKPSSAPPKKMK
        SGKELKKLL +  GL++SD  +DDDDD DD EE   GT V  SKQK+  KEE   N+P+KP PSG  +G P  AK +KGKRK  +G+  KPSS+  KK+K
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGKRK--NGEDVKPSSAPPKKMK

Query:  TETEPKST-DGVSASKATASKGAAASVKTEP--------GLASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGP
        TE +PKS+     A+  + S     +VK EP          A+GPVTE+EIRAVL ++  VTTQDLV++FKARL+  EDKNAFA ILR+IS+IQK +G  
Subjt:  TETEPKST-DGVSASKATASKGAAASVKTEP--------GLASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGP

Query:  SYVVLRK
        ++VVLR+
Subjt:  SYVVLRK

AT4G12610.2 transcription activators;DNA binding;RNA polymerase II transcription factors;catalytics;transcription initiation factors

5.3e-120

66.58

Show/hide

Query:  MQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKFDDKESAGAS---GRGRKKST-GDEYEGNVSDRGE
        MQ KEF AIPAGSWYNFNKVAQYKQLTLEEAEEKMKNR+KTADGY+RWMMKAA+NGPA FGEVD  ++KES G S   GRGRKKS+ GDE EGNVSDRG+
Subjt:  MQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKFDDKESAGAS---GRGRKKST-GDEYEGNVSDRGE

Query:  EDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK
        EDEEEEA+RK++LGLN+K   DDDDEEGPRGGDLD DDDD+EKGDDWEHEEIFTDDDE    D EERED LAPE+PAPPEIKQDE+DE+ E E EGGLSK
Subjt:  EDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREERED-LAPEVPAPPEIKQDEEDEDEENEGEGGLSK

Query:  SGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGKRK--NGEDVKPSSAPPKKMK
        SGKELKKLL +  GL++SD  +DDDDD DD EE   GT V  SKQK+  KEE   N+P+KP PSG  +G P  AK +KGKRK  +G+  KPSS+  KK+K
Subjt:  SGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGKRK--NGEDVKPSSAPPKKMK

Query:  TETEPKST-DGVSASKATASKGAAASVKTEP--------GLASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGP
        TE +PKS+     A+  + S     +VK EP          A+GPVTE+EIRAVL ++  VTTQDLV++FKARL+  EDKNAFA ILR+IS+IQK +G  
Subjt:  TETEPKST-DGVSASKATASKGAAASVKTEP--------GLASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGP

Query:  SYVVLRK
        ++VVLR+
Subjt:  SYVVLRK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCATTCGATTTGCTGCTGAAGCCGTCGTGCAGTGGATGTGGATCCACGACGGAGCTGTACGGCAGCAATTGCAAGCACATGACGTTGTGCTTGACCTGCGGCAAAAC
TATGGCGGAGAATAAGGGCAAATGTTACGACTGTGGCGCTACTGTATCTCGCTTAATAAGAGAATACAATGTTCGAGCGAGTGCGAGTAGCGACAAGAACTACTTCATTG
GTAGGTTCATGAGTGGGCTGCCGAACTTTTCAAAGAAGAGAAATGCTGAAAATAAATGGTCTCTTAATAAGGAAGGTCTACAAGGACGCCAGCTTACCGACGCGCTGCGG
GAAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACAGGGCAATTTCAATTCCAGGGTCATCTTGAAGGTTCACAGTCAGCAACGTATTACTTGCTTGTTATGCA
AGGAAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAATTTTAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGAGGCAGAAGAGAAAATGAAGAATCGGA
AGAAAACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGCCCTGCTGCATTTGGTGAAGTCGATAAGTTTGATGACAAAGAGAGTGCTGGTGCTAGT
GGCAGGGGACGCAAAAAATCTACCGGTGATGAGTATGAAGGTAATGTCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAAATTGGGGCTCAA
TAAAAAGGGTGGTGGCGATGATGATGATGAGGAAGGTCCTAGAGGAGGTGACCTTGACTTCGATGATGATGATGTTGAAAAAGGAGATGATTGGGAGCACGAAGAGATTT
TTACCGATGATGATGAAACTACTGCTCCGGATCGTGAAGAAAGGGAGGACTTAGCCCCGGAAGTTCCAGCACCTCCCGAGATTAAACAGGATGAAGAAGATGAGGACGAA
GAAAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGGCTTAATGATTCAGATGGGGAGGACGACGACGACGACGA
CGATGATGACGCGGAAGAGGAAATTGGCGGCACTCCAGTTTTGCCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTT
CTGGATCTGCTAAGGGAGCCCCTTCTTCGGCAAAGACGGCGAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAGCCATCCAGTGCACCTCCAAAGAAGATGAAAACCGAG
ACGGAACCGAAGTCTACAGATGGTGTATCTGCTTCCAAAGCTACGGCCTCAAAAGGTGCAGCAGCATCAGTCAAAACAGAACCGGGATTGGCTTCTGGACCTGTTACTGA
GGAAGAAATTAGGGCTGTTTTGCGACAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTCCGATGTTCCGAGGACAAGAATGCTTTTGCGG
AAATACTGAGGAGAATTTCAAGGATTCAAAAGACGAGCGGAGGACCGAGTTATGTCGTGTTGAGGAAACCCGAAGACTAG

mRNA sequence

Show/hide mRNA sequence

TTTCGTTCTCGACTGCGATTTTCTCAAAATTTCTCTTCGCTCTCTCTTCGTCTTCTCCTCTCTGTTCTTGACGGTATCTCTCTCAGATTTCTCTCTCTGCTATCTCTGTA
ACCCTAATTTATTCGCTAGATCGTCTAATCACTGTGGATCAAGAACTATTTCGCACCAAATCACTCTGATTCTGCCAATTTACGGGTTCTGTTGATTCTTGTTGCGGCAA
TGTCATTCGATTTGCTGCTGAAGCCGTCGTGCAGTGGATGTGGATCCACGACGGAGCTGTACGGCAGCAATTGCAAGCACATGACGTTGTGCTTGACCTGCGGCAAAACT
ATGGCGGAGAATAAGGGCAAATGTTACGACTGTGGCGCTACTGTATCTCGCTTAATAAGAGAATACAATGTTCGAGCGAGTGCGAGTAGCGACAAGAACTACTTCATTGG
TAGGTTCATGAGTGGGCTGCCGAACTTTTCAAAGAAGAGAAATGCTGAAAATAAATGGTCTCTTAATAAGGAAGGTCTACAAGGACGCCAGCTTACCGACGCGCTGCGGG
AAAAGTACAAGAATAGACCCTGGCTCTTGGAAGATGAAACAGGGCAATTTCAATTCCAGGGTCATCTTGAAGGTTCACAGTCAGCAACGTATTACTTGCTTGTTATGCAA
GGAAAGGAATTTACTGCCATTCCTGCAGGTTCTTGGTACAATTTTAACAAAGTGGCACAGTATAAGCAACTTACGTTGGAGGAGGCAGAAGAGAAAATGAAGAATCGGAA
GAAAACAGCAGATGGATATGAAAGATGGATGATGAAAGCTGCAAGTAATGGCCCTGCTGCATTTGGTGAAGTCGATAAGTTTGATGACAAAGAGAGTGCTGGTGCTAGTG
GCAGGGGACGCAAAAAATCTACCGGTGATGAGTATGAAGGTAATGTCTCAGATAGGGGAGAAGAAGATGAAGAAGAAGAGGCAGCAAGGAAGAACAAATTGGGGCTCAAT
AAAAAGGGTGGTGGCGATGATGATGATGAGGAAGGTCCTAGAGGAGGTGACCTTGACTTCGATGATGATGATGTTGAAAAAGGAGATGATTGGGAGCACGAAGAGATTTT
TACCGATGATGATGAAACTACTGCTCCGGATCGTGAAGAAAGGGAGGACTTAGCCCCGGAAGTTCCAGCACCTCCCGAGATTAAACAGGATGAAGAAGATGAGGACGAAG
AAAATGAAGGGGAGGGGGGGCTGAGCAAATCTGGGAAAGAGTTGAAGAAATTGCTTAGGCGTACTGGAGGGCTTAATGATTCAGATGGGGAGGACGACGACGACGACGAC
GATGATGACGCGGAAGAGGAAATTGGCGGCACTCCAGTTTTGCCTTCGAAGCAGAAGGATACAGTTAAAGAAGAAGCTGCAGCCAACAGTCCCTCAAAACCAACACCTTC
TGGATCTGCTAAGGGAGCCCCTTCTTCGGCAAAGACGGCGAAGGGGAAAAGGAAAAATGGTGAGGATGTGAAGCCATCCAGTGCACCTCCAAAGAAGATGAAAACCGAGA
CGGAACCGAAGTCTACAGATGGTGTATCTGCTTCCAAAGCTACGGCCTCAAAAGGTGCAGCAGCATCAGTCAAAACAGAACCGGGATTGGCTTCTGGACCTGTTACTGAG
GAAGAAATTAGGGCTGTTTTGCGACAAAGGACACCTGTAACTACACAGGATCTTGTTGCAAAATTCAAAGCAAGACTCCGATGTTCCGAGGACAAGAATGCTTTTGCGGA
AATACTGAGGAGAATTTCAAGGATTCAAAAGACGAGCGGAGGACCGAGTTATGTCGTGTTGAGGAAACCCGAAGACTAGAAGTGGGGACTAAATTTAGGTTTCATCTTTG
TGATGTAGCTGGTTGGTTCAAGATTGGTTATGTGGTGAAAAAACTGTATGCTGCTAAAGCTTGAGGTGCCCTCCTCTTTCACATGTGATGCACTTTTACGTGGTAATTCA
CTGTTGGAATTTAATTTGAGAAAGAAACCAAAAATTCTACTGACCCCTTGGTTATATTGACTTGGGTCATTTTCGAGCAAAACCCTCTTTTTTTTTTTTTTTTTTGCAAA
ATGAGTAAATATAGTGCTTTTGAGTATCATGTGATGTGCAGTTTATCTCGTGATAATAGTTAAAGTTAAAGTGTGTGTAAACCGTGACTAAAAAATATTAGTGTTTTATT
GATAGGGTTTTTGGAAGAAATTGTGTATAATAGTGGATTAAATTTTATTGTATTAGGGATTGGTGGTTGGTGAAGATTGACAGAAGGCTGATTGGCAAATTATTTTGGTA
ACAAAATCCA

Protein sequence

Show/hide protein sequence

MSFDLLLKPSCSGCGSTTELYGSNCKHMTLCLTCGKTMAENKGKCYDCGATVSRLIREYNVRASASSDKNYFIGRFMSGLPNFSKKRNAENKWSLNKEGLQGRQLTDALR
EKYKNRPWLLEDETGQFQFQGHLEGSQSATYYLLVMQGKEFTAIPAGSWYNFNKVAQYKQLTLEEAEEKMKNRKKTADGYERWMMKAASNGPAAFGEVDKFDDKESAGAS
GRGRKKSTGDEYEGNVSDRGEEDEEEEAARKNKLGLNKKGGGDDDDEEGPRGGDLDFDDDDVEKGDDWEHEEIFTDDDETTAPDREEREDLAPEVPAPPEIKQDEEDEDE
ENEGEGGLSKSGKELKKLLRRTGGLNDSDGEDDDDDDDDDAEEEIGGTPVLPSKQKDTVKEEAAANSPSKPTPSGSAKGAPSSAKTAKGKRKNGEDVKPSSAPPKKMKTE
TEPKSTDGVSASKATASKGAAASVKTEPGLASGPVTEEEIRAVLRQRTPVTTQDLVAKFKARLRCSEDKNAFAEILRRISRIQKTSGGPSYVVLRKPED

Sed0003006 (gene) of Chayote v1 genome