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Sed0003009 (gene) of Chayote v1 genome

Gene IDSed0003009
OrganismSechium edule (Chayote v1)
DescriptionPolyamine-modulated factor 1-binding protein
Genome locationLG13:25408831..25412730
RNA-Seq ExpressionSed0003009
SyntenySed0003009
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038779.1 uncharacterized protein E6C27_scaffold92G003330 [Cucumis melo var. makuwa]1.4e-3991Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
        MA SESKPNDQLIPLPE ES PEPESQLS L+FDISQQAQGAMENMLRMIS IDQNAVGI+E IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNNRG
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
KAG7024488.1 hypothetical protein SDJN02_13304 [Cucurbita argyrosperma subsp. argyrosperma]1.4e-3687.5Show/hide
Query:  MANSESKPNDQLIPLPES----ESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDML
        MA+SESKPNDQLIPLPES    ESE E ESQLSVL+F ISQQAQGAMENMLRMIS IDQNAVGILE IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDML
Subjt:  MANSESKPNDQLIPLPES----ESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDML

Query:  NNRG
        NN G
Subjt:  NNRG
XP_004136463.2 uncharacterized protein LOC101215419 [Cucumis sativus]2.0e-3890Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
        MA SESKPNDQLIPLPESES PE ESQLS L+FDISQQAQGAMENMLRMIS IDQNAVGI+E IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNN G
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
XP_008466349.1 PREDICTED: uncharacterized protein LOC103503784 [Cucumis melo]1.4e-3991Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
        MA SESKPNDQLIPLPE ES PEPESQLS L+FDISQQAQGAMENMLRMIS IDQNAVGI+E IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNNRG
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
XP_022937053.1 uncharacterized protein LOC111443468 [Cucurbita moschata]8.2e-3789.22Show/hide
Query:  MANSESKPNDQLIPLPESES--EPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
        MA+SESKPNDQLIPLPESES  E E ESQLSVL+F ISQQAQGAMENMLRMIS IDQNAVGILE IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNN
Subjt:  MANSESKPNDQLIPLPESES--EPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN

Query:  RG
         G
Subjt:  RG
TrEMBL top hitse value%identityAlignment
A0A0A0LJE0 Uncharacterized protein9.5e-3990Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
        MA SESKPNDQLIPLPESES PE ESQLS L+FDISQQAQGAMENMLRMIS IDQNAVGI+E IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNN G
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
A0A1S3CR82 uncharacterized protein LOC1035037846.6e-4091Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
        MA SESKPNDQLIPLPE ES PEPESQLS L+FDISQQAQGAMENMLRMIS IDQNAVGI+E IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNNRG
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
A0A5A7TBQ0 Uncharacterized protein6.6e-4091Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
        MA SESKPNDQLIPLPE ES PEPESQLS L+FDISQQAQGAMENMLRMIS IDQNAVGI+E IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNNRG
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG
A0A6J1FEZ1 uncharacterized protein LOC1114434684.0e-3789.22Show/hide
Query:  MANSESKPNDQLIPLPESES--EPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
        MA+SESKPNDQLIPLPESES  E E ESQLSVL+F ISQQAQGAMENMLRMIS IDQNAVGILE IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNN
Subjt:  MANSESKPNDQLIPLPESES--EPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN

Query:  RG
         G
Subjt:  RG
A0A6J1IGC1 uncharacterized protein LOC1114766764.4e-3687.25Show/hide
Query:  MANSESKPNDQLIPLPESE--SEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
        MA+SESKP DQLIPLPESE  SE E E+QLSVL+F ISQQAQGAMENMLRMIS IDQNAVGILE IEKCRGSALDRKGVLEEEKQQFQQAA+TVLDMLNN
Subjt:  MANSESKPNDQLIPLPESE--SEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN

Query:  RG
         G
Subjt:  RG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25570.1 unknown protein3.1e-1851.02Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
        MA S S+ + QL+         + +S L+ LVF++SQQ Q  MENML+M+  IDQN+VGI E IEK +  A+++K +LEEEK QFQ+AA+T+LDML+N
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
AT5G25570.2 unknown protein3.1e-1851.02Show/hide
Query:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
        MA S S+ + QL+         + +S L+ LVF++SQQ Q  MENML+M+  IDQN+VGI E IEK +  A+++K +LEEEK QFQ+AA+T+LDML+N
Subjt:  MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
AT5G25570.3 unknown protein6.5e-1658.21Show/hide
Query:  VFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN
        + ++SQQ Q  MENML+M+  IDQN+VGI E IEK +  A+++K +LEEEK QFQ+AA+T+LDML+N
Subjt:  VFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAATTCGGAATCAAAACCCAACGATCAGCTTATTCCGTTGCCGGAATCGGAATCGGAACCTGAACCTGAATCGCAGCTCTCAGTTCTCGTCTTCGATATATCGCA
ACAGGCGCAAGGGGCTATGGAGAACATGCTTAGAATGATCAGTGTAATTGATCAAAATGCTGTTGGAATATTGGAAGGCATAGAAAAGTGCAGGGGCTCGGCTCTTGACA
GGAAGGGGGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTTCACTGTTTTAGACATGCTCAACAACCGAGGATGA
mRNA sequenceShow/hide mRNA sequence
TATGATTTAAAATATTTGGTGTATTTAAAGTGGGATGAATTTGAAAAATCATTTTTTAGTTCTCAACCGCGCGAACACAGCAAGAACTCTTATTCCGGCATCTCTGCGAT
GGCAAATTCGGAATCAAAACCCAACGATCAGCTTATTCCGTTGCCGGAATCGGAATCGGAACCTGAACCTGAATCGCAGCTCTCAGTTCTCGTCTTCGATATATCGCAAC
AGGCGCAAGGGGCTATGGAGAACATGCTTAGAATGATCAGTGTAATTGATCAAAATGCTGTTGGAATATTGGAAGGCATAGAAAAGTGCAGGGGCTCGGCTCTTGACAGG
AAGGGGGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTTCACTGTTTTAGACATGCTCAACAACCGAGGATGAACGCTCAAGCGCTGAAAATTTTCTTGAGC
ATGAAGTGTCAGTTTCAGAGTCTTGCTTAAGCTTGAAGAATCAAGTTGTAAAGATAGTTGGCATTATGAATGGATATTACCTTCTGTTAGATGGTGGATATGATACACTA
TTTTTGTCAAGTTCACAAGTGCTATGGAACAGGTCTCATCTAATCCTCTTATGTTTTCTTGCAATTAGTTCTTGGTTTATTGATATATAGGATGTGCCTATCTTGCACTT
TGTCTGAATATTCTTCAATTGCAACCACATTACTACTTTTAAGCAACATAAGTTTTGTTCTAAAAGAAAGATACTGAGAGTCTGTTAGGAATGGCCCTTCGGGGAATTGG
GGAATAATAGAGGGGTATATGGGCAAATAGTTGGGGAGTTAGTTAGATACTTATAGTCATAAATTGAGTGGTTGTGTGAAAGGAAAGACATCCATATTTTAAGTGATTAT
ATTTTATACTCTAAAAGATGATTCTCTAGAGAAAGGGAG
Protein sequenceShow/hide protein sequence
MANSESKPNDQLIPLPESESEPEPESQLSVLVFDISQQAQGAMENMLRMISVIDQNAVGILEGIEKCRGSALDRKGVLEEEKQQFQQAAFTVLDMLNNRG