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Sed0003016 (gene) of Chayote v1 genome

Gene IDSed0003016
OrganismSechium edule (Chayote v1)
DescriptionSAUR-like auxin-responsive protein family
Genome locationLG05:35265940..35266361
RNA-Seq ExpressionSed0003016
SyntenySed0003016
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135743.1 auxin-induced protein 15A-like [Momordica charantia]6.9e-4487.88Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV++KQSL+RSSSTGNG SPKAVDVPKGYFTVYVGEVQKKRFV+PLSYLN+PSFQDLL QAEEEFGYDHPMGGITIPC+E+TFL LT+SLN+
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

XP_022952255.1 auxin-induced protein X10A-like [Cucurbita moschata]1.1e-4490.91Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

XP_022952257.1 auxin-induced protein 15A-like [Cucurbita moschata]8.2e-4590.91Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

XP_023553777.1 auxin-induced protein X10A-like [Cucurbita pepo subsp. pepo]3.1e-4489.9Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC+E+ FL+LTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

XP_038887900.1 auxin-induced protein X10A-like [Benincasa hispida]3.1e-4490.91Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC E+ FLDLTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

TrEMBL top hitse value%identityAlignment
A0A6J1C5R3 auxin-induced protein 15A-like3.4e-4487.88Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV++KQSL+RSSSTGNG SPKAVDVPKGYFTVYVGEVQKKRFV+PLSYLN+PSFQDLL QAEEEFGYDHPMGGITIPC+E+TFL LT+SLN+
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

A0A6J1GJW5 auxin-induced protein 15A-like4.0e-4590.91Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

A0A6J1GL91 auxin-induced protein X10A-like5.2e-4590.91Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC+E+ FLDLTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

A0A6J1HWI6 auxin-induced protein X10A-like3.4e-4489.9Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV +KQSLQRSSSTGNG SPKAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGITIPC+E  FLDLTR+LND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

A0A6J1I180 auxin-induced protein X10A-like1.7e-4386.87Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND
        MGFRLPRIV++K+SLQRSSS+GNG S KAVDVPKGYFTVYVGE QKKRFV+PLSYLNQPSFQDLLSQAEEEFGY+HPMGGIT+PC+E+ FLDLTRSLND
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLND

SwissProt top hitse value%identityAlignment
P32295 Indole-3-acetic acid-induced protein ARG74.0e-2659.18Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN
        MGFRLP        ++++ S  N  S K +D PKGY  VYVGE   KRFV+P+S+LNQP FQDLLSQAEEEFGYDHPMGG+TIPC+E+ F  +T  L+
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN

P33079 Auxin-induced protein 10A58.0e-2760Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL
        MGFR+  IV      +R+S      + K VDVPKGY  VYVG+ + +RF +P+SYLN+PSFQ+LLSQAEEEFGYDHPMGG+TIPC EE FL++T  LN+L
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL

P33080 Auxin-induced protein X10A6.5e-2961Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL
        MGFRLP        ++++S   N  S K+V+VPKGY  VYVG+ + +RF++P+SYLNQPSFQDLL+QAEEEFGYDHPMGG+TIPC E+ FL +T  LNDL
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL

P33081 Auxin-induced protein 15A5.2e-2663.27Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN
        MGFRLP I        R +S       KA D PKGY  VYVGE + KRFV+P+SYLNQPSFQDLLSQAEEEFGYDHPMGG+TIPC+E+ F  +T  LN
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN

P33083 Auxin-induced protein 6B2.3e-2660.2Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN
        MGFRLP        ++++S + N  S KAVDV KGY  VYVGE + +RFV+P+SYLN+PSFQDLLSQAEEEFGY HP GG+TIPC+E+ F  +T  LN
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.9e-2453.54Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE-VQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN
        M  R+ R++ S + L +S S     S   V +PKG+  VYVGE +QK+RFVVP++YL+ P FQ LL +AEEEFG+DHPMGG+TIPCTE+ F+DL   L+
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE-VQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN

AT4G34800.1 SAUR-like auxin-responsive protein family2.9e-2457.14Show/hide
Query:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE--VQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRS
        M  RL R++ SKQS ++ S            VPKG+  VYVGE    KKRFVVP+SYLN PSFQ LLS+AEEEFG++HP+GG+TIPC EETF+ L  S
Subjt:  MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGE--VQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRS

AT4G38840.1 SAUR-like auxin-responsive protein family3.6e-3059.6Show/hide
Query:  MGFRLPRIVY-SKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN
        M  R+PR++  SKQ L+++    + +S  ++DVPKGY  VYVGE   KRFVVP+SYL+QPSFQDLL +AEEEFG+DHPMGG+TIPC+EE F+DL    N
Subjt:  MGFRLPRIVY-SKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN

AT5G18060.1 SAUR-like auxin-responsive protein family1.0e-2456.04Show/hide
Query:  IVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN
        ++ +K+ L RS++  +         PKG+  VYVGE QKKR++VPLSYLNQPSFQ LLS++EEEFG+DHPMGG+TIPC E+TF+++T  L+
Subjt:  IVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLN

AT5G18080.1 SAUR-like auxin-responsive protein family7.7e-2563.75Show/hide
Query:  SSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSL
        S STG G++      PKG+  VYVGE QKKR++VP+SYLNQPSFQ LLS++EEEFG+DHPMGG+TIPC E+TF+++T  L
Subjt:  SSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTCCGTTTGCCTCGAATTGTTTACTCTAAGCAGAGTCTGCAGCGATCTTCATCAACCGGAAATGGAACGTCTCCAAAGGCTGTCGATGTTCCAAAGGGCTACTT
TACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCGTCCCACTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGAT
ATGATCATCCAATGGGTGGCATCACAATTCCTTGCACTGAAGAAACTTTCCTCGATCTCACTCGAAGTTTGAATGACTTGTGA
mRNA sequenceShow/hide mRNA sequence
CACAAATCAAATTTCTAAGTTTGGTATTCCTTTAAGGGTCTCTCATATTTCATTTCAAATCAACATGGGCTTCCGTTTGCCTCGAATTGTTTACTCTAAGCAGAGTCTGC
AGCGATCTTCATCAACCGGAAATGGAACGTCTCCAAAGGCTGTCGATGTTCCAAAGGGCTACTTTACAGTTTATGTTGGTGAGGTACAAAAGAAGCGTTTTGTCGTCCCA
CTATCTTACTTGAATCAACCTTCATTTCAAGATTTGTTGAGTCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGCATCACAATTCCTTGCACTGAAGAAAC
TTTCCTCGATCTCACTCGAAGTTTGAATGACTTGTGAAGTAGAGAGATTCAATTCTAGATATTACAGAAAAAGGATTAGATGTAAATACAAT
Protein sequenceShow/hide protein sequence
MGFRLPRIVYSKQSLQRSSSTGNGTSPKAVDVPKGYFTVYVGEVQKKRFVVPLSYLNQPSFQDLLSQAEEEFGYDHPMGGITIPCTEETFLDLTRSLNDL