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Sed0003030 (gene) of Chayote v1 genome

Gene IDSed0003030
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG07:2321004..2321937
RNA-Seq ExpressionSed0003030
SyntenySed0003030
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067974.1 uncharacterized protein E6C27_scaffold138G001610 [Cucumis melo var. makuwa]2.7e-1251.95Show/hide
Query:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD
        D  KSS  L+R + PT+KK  E+G +E++ V RLV WGGAF F CL +AS FK+ KKI    +RSR+ DS+LD   D
Subjt:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD

XP_008451548.1 PREDICTED: uncharacterized protein LOC103492795 [Cucumis melo]1.6e-1251.95Show/hide
Query:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD
        D  KSS  L+R + PT+KK+ E+G +E++ V RLV WGGAF F CL +AS FK+ KKI    +RSR+ DS+LD   D
Subjt:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD

XP_022153014.1 uncharacterized protein LOC111020615 [Momordica charantia]8.4e-0644.29Show/hide
Query:  SSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDA
        +S D  +  T T K   ++ I ++ +V  LVAWGGAF FACL  AS FKR +KI   ER   D  S   A
Subjt:  SSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDA

XP_031744420.1 putative uncharacterized protein DDB_G0281733 [Cucumis sativus]8.1e-0951.43Show/hide
Query:  KSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLD
        KSS  L+R D P +KK+ E+G +E+  V RLV WGGAF F CL +AS FK+ KK I   +  R+  SNLD
Subjt:  KSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLD

XP_038899634.1 uncharacterized G-patch domain protein DDB_G0278987-like [Benincasa hispida]1.4e-0858.73Show/hide
Query:  TDKKHAEMGIIESDSVSRLVAWGGAFTFAC-LFVASMFKRRKKIICLERRSRDHDSNLDAWKD
        T+KKH    IIE+D V R+ AWGGAF FAC L +AS FKR KKII  +R S+D DS+LD   D
Subjt:  TDKKHAEMGIIESDSVSRLVAWGGAFTFAC-LFVASMFKRRKKIICLERRSRDHDSNLDAWKD

TrEMBL top hitse value%identityAlignment
A0A0A0K656 Uncharacterized protein3.9e-0951.43Show/hide
Query:  KSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLD
        KSS  L+R D P +KK+ E+G +E+  V RLV WGGAF F CL +AS FK+ KK I   +  R+  SNLD
Subjt:  KSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLD

A0A1S3BRP4 uncharacterized protein LOC1034927957.7e-1351.95Show/hide
Query:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD
        D  KSS  L+R + PT+KK+ E+G +E++ V RLV WGGAF F CL +AS FK+ KKI    +RSR+ DS+LD   D
Subjt:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD

A0A5A7VKM4 Uncharacterized protein1.3e-1251.95Show/hide
Query:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD
        D  KSS  L+R + PT+KK  E+G +E++ V RLV WGGAF F CL +AS FK+ KKI    +RSR+ DS+LD   D
Subjt:  DLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKD

A0A6J1DHS3 uncharacterized protein LOC1110206154.1e-0644.29Show/hide
Query:  SSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDA
        +S D  +  T T K   ++ I ++ +V  LVAWGGAF FACL  AS FKR +KI   ER   D  S   A
Subjt:  SSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGTTCGATCTCGGAAAATCGAGCTCTGACCTCAAGCGAGCAGACACACCAACCGACAAGAAGCATGCCGAGATGGGTATCATCGAAAGCGACAGTGTTTCGCGGTT
GGTTGCATGGGGTGGAGCCTTCACTTTTGCTTGTTTATTTGTAGCATCTATGTTCAAGAGAAGGAAGAAGATCATATGTCTTGAAAGGCGTAGTCGAGACCATGATTCAA
ATCTTGACGCATGGAAGGACTGCAACTTCTTCTACTCATAA
mRNA sequenceShow/hide mRNA sequence
AATAGATCAACTGCCTCCTACTCCTCTCCTTTCTTCCCCCAACAGATCATATCAATGTGGTTCGATCTCGGAAAATCGAGCTCTGACCTCAAGCGAGCAGACACACCAAC
CGACAAGAAGCATGCCGAGATGGGTATCATCGAAAGCGACAGTGTTTCGCGGTTGGTTGCATGGGGTGGAGCCTTCACTTTTGCTTGTTTATTTGTAGCATCTATGTTCA
AGAGAAGGAAGAAGATCATATGTCTTGAAAGGCGTAGTCGAGACCATGATTCAAATCTTGACGCATGGAAGGACTGCAACTTCTTCTACTCATAACTCGTTCATGCCACA
TCGACTTCCAAGGATGGAACCCATCTTAGAAAAGAACGAAGACGATAAATTCATCAGAAGAAGAATATTCATCTTCTTGGGGAGTTCTTTTGGAGAACATTGAGAGAGAT
GATAGAGTCATTGATATAGTAATATATAGAGAAGAGGAAGAGGCTGCTTGAACGATTTGATGTCGAAGAATTTGAATTTTACGTACTTTTATTCTCTACATTTGGTTAAA
TCTTTATATTTGGCAAATGAATTGGTTTATGAACTTTAATTATTATTTTATTTTAAAAGTTTCCAAATTTCTCTTTTTC
Protein sequenceShow/hide protein sequence
MWFDLGKSSSDLKRADTPTDKKHAEMGIIESDSVSRLVAWGGAFTFACLFVASMFKRRKKIICLERRSRDHDSNLDAWKDCNFFYS