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Sed0003082 (gene) of Chayote v1 genome

Gene IDSed0003082
OrganismSechium edule (Chayote v1)
Descriptioncytochrome c oxidase assembly factor 6
Genome locationLG08:4092497..4093567
RNA-Seq ExpressionSed0003082
SyntenySed0003082
Gene Ontology termsGO:0005739 - mitochondrion (cellular component)
GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domainsIPR003213 - Cytochrome c oxidase, subunit VIb
IPR036549 - Cytochrome c oxidase, subunit VIb superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]4.3e-5086.73Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MAVEAD+S   DEVH DVL+ESRQACYKARDAFYACVE +SDKKPTEIASVGL+YPAECK LRA++V LCRASWVKHFDRKFCQNSRVQRLLDDKD R+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPT
        PLILPQPYTFKPT
Subjt:  PLILPQPYTFKPT
XP_022134674.1 uncharacterized protein LOC111006886 [Momordica charantia]1.1e-5088.6Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MAVEADAS   DEVH DVLA SRQACYKARDAFYACVE +SDKKPTEIASVGL+YPAECK LRAEFV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPTT
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTT
XP_022926034.1 cytochrome c oxidase assembly factor 6 [Cucurbita moschata]8.2e-4985.09Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MA E D S   +EVH DVLAE RQACYKARDAFYACVE +SDKKPTEIASVGLLYPAECK  RAEFV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPTT
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTT
XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]3.7e-4985.09Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MA+E D S   +EVH DVLAE RQACYKARDAFYACVE +SDKKPTEIASVGLLYPAECK  RAEFV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPTT
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTT
XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]3.0e-5190.27Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MAVEADAS   DEVH DVLAESRQACYKARDAFYACVE +SDKKPTEIASVGL+YPAECK LRA FV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPT
        PLILPQPYTFKPT
Subjt:  PLILPQPYTFKPT
TrEMBL top hitse value%identityAlignment
A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X12.1e-5086.73Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MAVEAD+S   DEVH DVL+ESRQACYKARDAFYACVE +SDKKPTEIASVGL+YPAECK LRA++V LCRASWVKHFDRKFCQNSRVQRLLDDKD R+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPT
        PLILPQPYTFKPT
Subjt:  PLILPQPYTFKPT
A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X32.1e-5086.73Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MAVEAD+S   DEVH DVL+ESRQACYKARDAFYACVE +SDKKPTEIASVGL+YPAECK LRA++V LCRASWVKHFDRKFCQNSRVQRLLDDKD R+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPT
        PLILPQPYTFKPT
Subjt:  PLILPQPYTFKPT
A0A6J1BZF0 uncharacterized protein LOC1110068865.5e-5188.6Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MAVEADAS   DEVH DVLA SRQACYKARDAFYACVE +SDKKPTEIASVGL+YPAECK LRAEFV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPTT
        PL LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTT
A0A6J1EDW1 cytochrome c oxidase assembly factor 64.0e-4985.09Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MA E D S   +EVH DVLAE RQACYKARDAFYACVE +SDKKPTEIASVGLLYPAECK  RAEFV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPTT
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTT
A0A6J1I7I2 cytochrome c oxidase assembly factor 61.8e-4985.09Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MA+E D S   +EVH DVLAE RQACYKARDAFYACVE +SDKKPTEIASVGLLYPAECK  RAEFV LCRASWVKHFDRKFCQNSRVQRLLDDKDSR+G
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPTT
        PL+LPQPYTFKPT+
Subjt:  PLILPQPYTFKPTT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein4.6e-4267.26Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MA++  AS++ ++VH DVL ++R ACYKARDAFYAC+E +S KKPTEIA+VGLLYP EC   R +FV+ CR+SWVKHFDR++C+N RVQRLLDD D RKG
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT
AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein4.6e-4267.26Show/hide
Query:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG
        MA++  AS++ ++VH DVL ++R ACYKARDAFYAC+E +S KKPTEIA+VGLLYP EC   R +FV+ CR+SWVKHFDR++C+N RVQRLLDD D RKG
Subjt:  MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKG

Query:  PLILPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLILPQPYTFKPT

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGAAGCCGACGCATCTGCAAGCGAAGATGAAGTTCACGGCGACGTTCTAGCGGAATCCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTACGCTTGTGT
TGAGAATCAATCGGACAAAAAGCCCACTGAAATCGCTTCTGTCGGCCTTCTTTACCCCGCCGAGTGTAAACCCTTGAGGGCCGAGTTCGTCAGCCTTTGTAGGGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAATAGTAGGGTTCAGAGACTCTTAGATGACAAAGATTCGAGGAAAGGTCCTTTGATTCTTCCGCAGCCTTATACTTTT
AAACCAACTACTTGA
mRNA sequenceShow/hide mRNA sequence
TGACTGGGCCCAAATCGGAAGCCCGAACCCGGTGAGCGAAAACCCCCAAATCCAAAAGAACTCCGTCTCTGCGGCGAGAACTCAAACCATGGCGGTTGAAGCCGACGCAT
CTGCAAGCGAAGATGAAGTTCACGGCGACGTTCTAGCGGAATCCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTACGCTTGTGTTGAGAATCAATCGGACAAAAAG
CCCACTGAAATCGCTTCTGTCGGCCTTCTTTACCCCGCCGAGTGTAAACCCTTGAGGGCCGAGTTCGTCAGCCTTTGTAGGGCTTCTTGGGTGAAGCATTTTGATAGGAA
GTTTTGTCAGAATAGTAGGGTTCAGAGACTCTTAGATGACAAAGATTCGAGGAAAGGTCCTTTGATTCTTCCGCAGCCTTATACTTTTAAACCAACTACTTGAACTGAAA
ATACCCCTCCAGGTGCTGGCATGTATTTCTCGACCAAGAGGTTGCAGGTTCGAATCCCTTAAAACGCTTCCGGTGGAACTACTTTGGGCGGTCATGGTCAGAATCTCATT
ACTATCGTTATTTTTGTTATTTTTGCTTTTTTTACTCTGTGTAGAGAGGATTGTGGCAATAGATTTCATAATAATGTCAATCTTCTTACCAAATACCAACATACCAAAGC
CTGTTTCCTCCCTGTTGTTTTTTATAGCTTTAAGGTATGGTAGTTCTGGCTTCTTATCAGTATGATCATGATGTAATCAATAAACATACAATGCCCTAAAATTTTGTGAG
TTCGTTATATCGTCAAAATTGCTGAGTTTAGGGTGCAAGGCCAACAAGAGCTTAGCTCAAATGGCATGATTATAATTTATGATCAATAGGTCATGAATTTAAATCTCTC
Protein sequenceShow/hide protein sequence
MAVEADASASEDEVHGDVLAESRQACYKARDAFYACVENQSDKKPTEIASVGLLYPAECKPLRAEFVSLCRASWVKHFDRKFCQNSRVQRLLDDKDSRKGPLILPQPYTF
KPTT