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Sed0003088 (gene) of Chayote v1 genome

Gene IDSed0003088
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:4278372..4279010
RNA-Seq ExpressionSed0003088
SyntenySed0003088
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587851.1 hypothetical protein SDJN03_16416, partial [Cucurbita argyrosperma subsp. sororia]3.5e-2159.6Show/hide
Query:  MGSEIM----FEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFS------SLVVSFSSCLCVDDVSMC
        MG E+M    F+G ISM++FLIERRPYHRNCGCALH RLKNG C  AL SSVSFL  +KWT    +QIQA S+FS      SL+   SS +C D+VS+C
Subjt:  MGSEIM----FEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFS------SLVVSFSSCLCVDDVSMC

KGN65216.1 hypothetical protein Csa_019753 [Cucumis sativus]6.2e-1064.52Show/hide
Query:  MGSEIMFEGIISMQNFLIERRPYHRNCGCALH-DRLKNG-VCLKALKS--SVSFLNPQKWTK
        +GS + F+G +S+Q+FLIERRPYHRNCGCALH DR++NG  C  ALKS  SVSFL  QK  K
Subjt:  MGSEIMFEGIISMQNFLIERRPYHRNCGCALH-DRLKNG-VCLKALKS--SVSFLNPQKWTK

XP_009358580.1 PREDICTED: uncharacterized protein LOC103949200 [Pyrus x bretschneideri]3.6e-1047.62Show/hide
Query:  MFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNY-GVQIQATSKFSSLVVSFSSCLCVDDVSM
        +FEG +SMQ+  IERRPYH+NC CALH   K+GVC  A + ++SF   Q WT  +  +Q  ATSKFSS  V+ +S    + +S+
Subjt:  MFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNY-GVQIQATSKFSSLVVSFSSCLCVDDVSM

XP_023531631.1 uncharacterized protein LOC111793815 isoform X1 [Cucurbita pepo subsp. pepo]2.3e-1763.16Show/hide
Query:  MGSEIM----FEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFSS
        MG E+M    F+G ISM +FLIERRPYHRNCGCALH R KNG C  AL +SVSFL  +KWT    +QIQA S+FS+
Subjt:  MGSEIM----FEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFSS

XP_023531633.1 uncharacterized protein LOC111793815 isoform X2 [Cucurbita pepo subsp. pepo]2.3e-1763.16Show/hide
Query:  MGSEIM----FEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFSS
        MG E+M    F+G ISM +FLIERRPYHRNCGCALH R KNG C  AL +SVSFL  +KWT    +QIQA S+FS+
Subjt:  MGSEIM----FEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFSS

TrEMBL top hitse value%identityAlignment
A0A0A0LZ02 Uncharacterized protein3.0e-1064.52Show/hide
Query:  MGSEIMFEGIISMQNFLIERRPYHRNCGCALH-DRLKNG-VCLKALKS--SVSFLNPQKWTK
        +GS + F+G +S+Q+FLIERRPYHRNCGCALH DR++NG  C  ALKS  SVSFL  QK  K
Subjt:  MGSEIMFEGIISMQNFLIERRPYHRNCGCALH-DRLKNG-VCLKALKS--SVSFLNPQKWTK

A0A498HZI5 Uncharacterized protein5.1e-1050.68Show/hide
Query:  EIMFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNY-GVQIQATSKFSSLVV
        + +FEG +SMQ+  IERRPYH+NC CALH   K GVC  A + ++SF   Q W+  +  +Q  ATSKFSS +V
Subjt:  EIMFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNY-GVQIQATSKFSSLVV

A0A5A7U781 Uncharacterized protein5.1e-1057.75Show/hide
Query:  MFEGIISMQNFLIERRPYHRNCGCALH-DRLKNG-VCLKA--LKSSVSFLNPQKWTKNYGVQIQATSKFSS
        +F+G +SMQ+FLIERRPYHRNCGCALH DR +NG  C  A  LK+SVSFL  QK        ++++SK SS
Subjt:  MFEGIISMQNFLIERRPYHRNCGCALH-DRLKNG-VCLKA--LKSSVSFLNPQKWTKNYGVQIQATSKFSS

A0A5N5GU95 Uncharacterized protein8.7e-1045.56Show/hide
Query:  EIMFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWT-KNYGVQIQATSKFSSLVVSFSSCLCVDDVSMCLGD
        + +FEG +SMQ+  IERRPYH+NC CALH   K GVC  A + ++SF   Q W+ ++  +Q  ATSKFSS +V   S       S   GD
Subjt:  EIMFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWT-KNYGVQIQATSKFSSLVVSFSSCLCVDDVSMCLGD

A0A5N5H0F5 Uncharacterized protein6.6e-1054.41Show/hide
Query:  MFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNY-GVQIQATSKFSS
        +FEG +SMQ+  IERRPYH+NC CALH   K+GVC  A + ++SF   Q WT  +  +Q  ATSKFSS
Subjt:  MFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNY-GVQIQATSKFSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46490.1 unknown protein1.5e-0668.97Show/hide
Query:  MFEGIISMQNFLIERRPYHRNCGCALHDR
        +FEG IS  +  IERRPYH+NCGCALHD+
Subjt:  MFEGIISMQNFLIERRPYHRNCGCALHDR

AT5G35110.1 unknown protein2.8e-0839.24Show/hide
Query:  MFEGIISMQNFLIERRPYHRNCGCALHDRLKNG----VCLKALKSSVSFLNPQKWTKNYGVQIQ-ATSKFSSLVVSFSS
        +FEG IS  +  I+RRPYH+NCGCALH+R + G     C       V F   + W++   + +  A+S  SS + S SS
Subjt:  MFEGIISMQNFLIERRPYHRNCGCALHDRLKNG----VCLKALKSSVSFLNPQKWTKNYGVQIQ-ATSKFSSLVVSFSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTGAAATAATGTTCGAAGGAATCATTTCAATGCAAAATTTTCTTATTGAGCGAAGGCCTTATCATCGCAACTGTGGCTGTGCGTTACACGATCGTCTCAAAAA
TGGGGTTTGCTTAAAAGCTCTTAAAAGCTCTGTTTCGTTTCTAAATCCCCAAAAATGGACCAAAAATTATGGGGTTCAAATTCAGGCCACTTCCAAATTCTCATCTCTTG
TTGTTAGCTTTTCTTCTTGTTTATGTGTAGATGATGTTTCAATGTGTTTAGGGGATTTTCATTAA
mRNA sequenceShow/hide mRNA sequence
CACAACTCCCCAATCCCAATTTTATAAATTCAACCCTTCTAAACCCAAATCCTCCTCTTTCTCTCCTACACAACACCACATCATCGGTATTTAGCTCGAGAGCAGTAATA
CTTTATATGTAGAGTTCGTGGTCTGTCTTTTCCCATTTGTTCTCGAAAAAAAAACAAATAGAGAATTGAATCCGATGGGAAGTGAAATAATGTTCGAAGGAATCATTTCA
ATGCAAAATTTTCTTATTGAGCGAAGGCCTTATCATCGCAACTGTGGCTGTGCGTTACACGATCGTCTCAAAAATGGGGTTTGCTTAAAAGCTCTTAAAAGCTCTGTTTC
GTTTCTAAATCCCCAAAAATGGACCAAAAATTATGGGGTTCAAATTCAGGCCACTTCCAAATTCTCATCTCTTGTTGTTAGCTTTTCTTCTTGTTTATGTGTAGATGATG
TTTCAATGTGTTTAGGGGATTTTCATTAATGTTGAGTTTTGTTTTTGTTTGGTTTTTGTTGCTATACAGAGAGATTGTACTGTTTGGATATGTGTATGTGTAAGTTTTTC
TTGTTGAGTTTGTGTTGTTTGATTACTAAAGAGGGTAGATTTTAATCCATGAAGAAAAAAAACACTTTTATTAAGAATCCACAAGATGG
Protein sequenceShow/hide protein sequence
MGSEIMFEGIISMQNFLIERRPYHRNCGCALHDRLKNGVCLKALKSSVSFLNPQKWTKNYGVQIQATSKFSSLVVSFSSCLCVDDVSMCLGDFH