; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003104 (gene) of Chayote v1 genome

Gene IDSed0003104
OrganismSechium edule (Chayote v1)
Descriptionserine/arginine-rich splicing factor RSZ22-like
Genome locationLG05:30271177..30276235
RNA-Seq ExpressionSed0003104
SyntenySed0003104
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0016607 - nuclear speck (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136307.1 serine/arginine-rich splicing factor RSZ22 [Cucumis sativus]6.6e-9192.35Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    G GGGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSR--GGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECR R  GGGG GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRS+SPRGRS SRSPPYRGREE+PYANGNG+KDRRRSRS
Subjt:  CGEPGHFARECRSR--GGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

XP_022133130.1 serine/arginine-rich splicing factor RSZ22-like [Momordica charantia]5.0e-9194.33Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    G GGGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECR RGGG  GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREELPYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

XP_022940964.1 serine/arginine-rich splicing factor RSZ22-like [Cucurbita moschata]6.0e-9294.85Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    GG GGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECRSRGGGG GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREE+PYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

XP_022981880.1 serine/arginine-rich splicing factor RSZ22-like [Cucurbita maxima]8.6e-9193.81Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    GG GGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECRSRGG   GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREE+PYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

XP_023524392.1 serine/arginine-rich splicing factor RSZ22-like [Cucurbita pepo subsp. pepo]2.4e-9394.85Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    GG GGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECRSRGGGG GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREE+PYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

TrEMBL top hitse value%identityAlignment
A0A0A0LEI3 Uncharacterized protein3.2e-9192.35Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    G GGGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSR--GGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECR R  GGGG GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRS+SPRGRS SRSPPYRGREE+PYANGNG+KDRRRSRS
Subjt:  CGEPGHFARECRSR--GGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

A0A1S3CQW5 serine/arginine-rich splicing factor RSZ22A3.5e-9092.78Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    G GGGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECR RG    GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREELPYANGNG+KDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

A0A6J1BUF4 serine/arginine-rich splicing factor RSZ22-like2.4e-9194.33Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    G GGGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECR RGGG  GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREELPYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

A0A6J1FS77 serine/arginine-rich splicing factor RSZ22-like2.9e-9294.85Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    GG GGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECRSRGGGG GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREE+PYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

A0A6J1J0W6 serine/arginine-rich splicing factor RSZ22-like4.2e-9193.81Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAF+DFDDPRDARDAIHELDGKNGWR+ELSHNSRGGGG    GG GGGRGRSGGSDLKCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGEPGHFARECRSRGG   GGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRS SRSPPYRGREE+PYANGNGVKDRRRSRS
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

SwissProt top hitse value%identityAlignment
O81126 Serine/arginine-rich splicing factor RSZ221.7e-7377.03Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHN--SRGGGG-GGGRGGGGGGRGRSGGSDLK
        MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDGKNGWR+E SHN   RGGGG GG RGGGGGGRG  GGSDLK
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHN--SRGGGG-GGGRGGGGGGRGRSGGSDLK

Query:  CYECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSLSRS-PPYRGREELPYANGNG
        CYECGE GHFARECR+R         GG GRRRS+S     PRYRRSPSYGRRSYSPR RS   PRRRS SP   RGRS SRS PPYR REE+PYANGNG
Subjt:  CYECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSLSRS-PPYRGREELPYANGNG

Query:  VKDRRRSRS
        +K+RRRSRS
Subjt:  VKDRRRSRS

Q69KL9 Serine/arginine-rich splicing factor RSZ21A7.6e-5868.84Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        M+RVYVGNLDPRV+ RELEDEFRVFGV+RSVWVAR+PPG+AF+DFDD RDA+DAI ++DGKNGWR+ELS N+           G GGR R G S+ KCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSR-GGGGAGGG-GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP-RGRSLSRSPPY-RGREELP-YANGNGVKDRRRSRS
        CGE GHFARECR R G GG G G      R RSRSPRYRRSPSYGRRSYSP GRSPRRRS+SP R RS SRSP Y RGR+E P Y NG      RRSRS
Subjt:  CGEPGHFARECRSR-GGGGAGGG-GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP-RGRSLSRSPPY-RGREELP-YANGNGVKDRRRSRS

Q6K4N0 Serine/arginine-rich splicing factor RSZ212.2e-5767.01Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        M+R+YVGNLDPRV+  ELEDEFRVFGV+RSVWVAR+PPG+AF+DFDD RDA DA+ +LDGKNGWR+ELS NS             GGR R GGS++KCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSR-GGGGAGGG-GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP-RGRSLSRSPPYRGREELPYANGNGVKDRRRSRS
        CGE GHFARECR R G GG G G      R RSRSP+YR+SP+YGRRSYSPR RSPRRRS+SP RGRS SRSP  RGR   PYA+G      RRSRS
Subjt:  CGEPGHFARECRSR-GGGGAGGG-GGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSP-RGRSLSRSPPYRGREELPYANGNGVKDRRRSRS

Q6K9C3 Serine/arginine-rich splicing factor RSZ239.7e-5361.61Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        M+RVYVGNLDPRV+ RE+EDEFRVFGV+RSVWVAR+PPG+AF+DFDD RDA DAI +LDGKNGWR+ELS           + G G GR RSGGSD+KCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSR-GGGGAGGGGGGA----------GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLS-----PRGRSLSRSPP-------------
        CGEPGHFARECR R G GG G G   +          GR RSRSPRYRRSPSYGR   SPR RSP+RRS S      R RS SRSPP             
Subjt:  CGEPGHFARECRSR-GGGGAGGGGGGA----------GRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLS-----PRGRSLSRSPP-------------

Query:  YRGREELPYAN
           REE PYAN
Subjt:  YRGREELPYAN

Q9SJA6 Serine/arginine-rich splicing factor RSZ22A2.4e-7278.05Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGG-GGGRGGGGGGRGRSGGSDLKCY
        MSRVYVGNLDPRV+ERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDARDAI E+DGKNGWR+E SHN  GGGG GGGRGGG GGRGR GGSDLKCY
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGG-GGGRGGGGGGRGRSGGSDLKCY

Query:  ECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSY-GRRSYSPRGRS---PRRRSLSPRGRSLSRS-PPYRGREELPYANGNGVKDR
        ECGE GHFARECRSRGG G        GRRRSRS     PRYR+SP+Y GRRSYSPR RS   PRRRS SPRGR+ SRS PPYR R+E+PYANGNG+KD 
Subjt:  ECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSY-GRRSYSPRGRS---PRRRSLSPRGRSLSRS-PPYRGREELPYANGNGVKDR

Query:  RRSRS
        RRSRS
Subjt:  RRSRS

Arabidopsis top hitse value%identityAlignment
AT1G23860.1 RS-containing zinc finger protein 211.2e-5363.86Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        M+RVYVGNLDPRV+ERELEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI  LD KNGWR+ELSH  +     GGRGGGGG RG  G  D KCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYG--RRSYSPRGR--SPRRRSLSP--RGRSLSRSPPYRGR-------------EELPYA
        CGE GHFARECR          G G+ RRRS SPR RRSP YG  RRS SPRGR   PRRRS++P  RGRS SRSPPYRG                 PYA
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYG--RRSYSPRGR--SPRRRSLSP--RGRSLSRSPPYRGR-------------EELPYA

Query:  NG
        NG
Subjt:  NG

AT1G23860.2 RS-containing zinc finger protein 211.2e-5363.86Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE
        M+RVYVGNLDPRV+ERELEDEF+ FGV+R+VWVARRPPGYAF++FDD RDA DAI  LD KNGWR+ELSH  +     GGRGGGGG RG  G  D KCYE
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYE

Query:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYG--RRSYSPRGR--SPRRRSLSP--RGRSLSRSPPYRGR-------------EELPYA
        CGE GHFARECR          G G+ RRRS SPR RRSP YG  RRS SPRGR   PRRRS++P  RGRS SRSPPYRG                 PYA
Subjt:  CGEPGHFARECRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYG--RRSYSPRGR--SPRRRSLSP--RGRSLSRSPPYRGR-------------EELPYA

Query:  NG
        NG
Subjt:  NG

AT2G24590.1 RNA recognition motif and CCHC-type zinc finger domains containing protein1.7e-7378.05Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGG-GGGRGGGGGGRGRSGGSDLKCY
        MSRVYVGNLDPRV+ERELEDEFR FGVIRSVWVARRPPGYAF+DF+D RDARDAI E+DGKNGWR+E SHN  GGGG GGGRGGG GGRGR GGSDLKCY
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGG-GGGRGGGGGGRGRSGGSDLKCY

Query:  ECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSY-GRRSYSPRGRS---PRRRSLSPRGRSLSRS-PPYRGREELPYANGNGVKDR
        ECGE GHFARECRSRGG G        GRRRSRS     PRYR+SP+Y GRRSYSPR RS   PRRRS SPRGR+ SRS PPYR R+E+PYANGNG+KD 
Subjt:  ECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSY-GRRSYSPRGRS---PRRRSLSPRGRSLSRS-PPYRGREELPYANGNGVKDR

Query:  RRSRS
        RRSRS
Subjt:  RRSRS

AT4G31580.1 serine/arginine-rich 221.2e-7477.03Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHN--SRGGGG-GGGRGGGGGGRGRSGGSDLK
        MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDGKNGWR+E SHN   RGGGG GG RGGGGGGRG  GGSDLK
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHN--SRGGGG-GGGRGGGGGGRGRSGGSDLK

Query:  CYECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSLSRS-PPYRGREELPYANGNG
        CYECGE GHFARECR+R         GG GRRRS+S     PRYRRSPSYGRRSYSPR RS   PRRRS SP   RGRS SRS PPYR REE+PYANGNG
Subjt:  CYECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSLSRS-PPYRGREELPYANGNG

Query:  VKDRRRSRS
        +K+RRRSRS
Subjt:  VKDRRRSRS

AT4G31580.2 serine/arginine-rich 221.2e-7477.03Show/hide
Query:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHN--SRGGGG-GGGRGGGGGGRGRSGGSDLK
        MSRVYVGNLDPRV+ERELEDEFR FGV+RSVWVARRPPGYAF+DF+DPRDARDAI  LDGKNGWR+E SHN   RGGGG GG RGGGGGGRG  GGSDLK
Subjt:  MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHN--SRGGGG-GGGRGGGGGGRGRSGGSDLK

Query:  CYECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSLSRS-PPYRGREELPYANGNG
        CYECGE GHFARECR+R         GG GRRRS+S     PRYRRSPSYGRRSYSPR RS   PRRRS SP   RGRS SRS PPYR REE+PYANGNG
Subjt:  CYECGEPGHFARECRSRGGGGAGGGGGGAGRRRSRS-----PRYRRSPSYGRRSYSPRGRS---PRRRSLSP---RGRSLSRS-PPYRGREELPYANGNG

Query:  VKDRRRSRS
        +K+RRRSRS
Subjt:  VKDRRRSRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCGTGTGTACGTTGGGAATTTGGATCCAAGGGTCTCTGAGCGCGAGCTCGAAGATGAATTTCGGGTGTTTGGAGTTATTCGAAGTGTGTGGGTTGCACGGCGACC
TCCAGGTTATGCCTTTGTTGATTTTGATGACCCCAGAGATGCACGGGATGCAATCCATGAATTAGACGGGAAAAATGGCTGGAGAATTGAGCTTTCTCATAATTCTAGAG
GTGGTGGAGGTGGAGGTGGCCGTGGAGGAGGCGGAGGGGGTCGTGGTCGTTCTGGTGGTTCTGATCTGAAATGCTATGAATGTGGTGAGCCTGGGCATTTTGCTCGGGAA
TGCCGTTCACGTGGTGGCGGTGGGGCTGGTGGTGGTGGTGGTGGTGCTGGAAGAAGGCGTAGCCGCAGTCCTCGATACCGTCGGAGTCCAAGTTATGGTCGCAGGAGTTA
CAGTCCACGTGGAAGGTCTCCAAGACGCCGCAGTTTGTCACCTCGTGGGCGTAGCCTTAGCAGATCACCTCCATATCGCGGTAGAGAGGAGCTTCCTTATGCCAACGGAA
ATGGCGTAAAGGACCGGCGTCGGAGCAGGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATTTAAGTAACTCCGCAATGACCGGTAACCAAAATTTCAGAACCTTTGAAGAGAGAAACTCGTCGGGCTGCTAGGGTTTATTTCTCCGGTACGTGCATCGCCTGCTCCGA
TCTGTTCGTTTCTTGAATTCAAAATGTCTCGTGTGTACGTTGGGAATTTGGATCCAAGGGTCTCTGAGCGCGAGCTCGAAGATGAATTTCGGGTGTTTGGAGTTATTCGA
AGTGTGTGGGTTGCACGGCGACCTCCAGGTTATGCCTTTGTTGATTTTGATGACCCCAGAGATGCACGGGATGCAATCCATGAATTAGACGGGAAAAATGGCTGGAGAAT
TGAGCTTTCTCATAATTCTAGAGGTGGTGGAGGTGGAGGTGGCCGTGGAGGAGGCGGAGGGGGTCGTGGTCGTTCTGGTGGTTCTGATCTGAAATGCTATGAATGTGGTG
AGCCTGGGCATTTTGCTCGGGAATGCCGTTCACGTGGTGGCGGTGGGGCTGGTGGTGGTGGTGGTGGTGCTGGAAGAAGGCGTAGCCGCAGTCCTCGATACCGTCGGAGT
CCAAGTTATGGTCGCAGGAGTTACAGTCCACGTGGAAGGTCTCCAAGACGCCGCAGTTTGTCACCTCGTGGGCGTAGCCTTAGCAGATCACCTCCATATCGCGGTAGAGA
GGAGCTTCCTTATGCCAACGGAAATGGCGTAAAGGACCGGCGTCGGAGCAGGAGCTGAGGACTACGGACTTCTCAACCTGCCTTTGTTCACACAAAATGTTTAGACGATT
ACTTCGATTCTATGTGTTTTTAGTGCTTCGACTTCGTAACAGACCTTTATAAAATTGGGCGACACCCTCAGCCTCTACGTTTGAGTTTGGATAAGTCCTTTCTATCTTAA
ATTTGACTAGTTTTTCTCTTATCCCTTCAGTTTAGTCTAAGGAATCTATATGCTTAAATATTATCAGTTCATATTTATTTTGATAATGTTACTAAGCAAATGTCTTGATG
GGCACTGCTAAAGATTTATGTTTTTTTCCTTGTTGAGGTGTCGTCGTTCTGCTTCACTGCTTTTCTGCTTCTAGTCGTCTGCTTCTGCTTCACTGCTTTTCTGCTTCTTG
TCGTCTGATTCTGCTTCACTGCTTTTCTGCTTCTGCCCTATCCCGGGTTTTCGTTCTACACTCCCCAGCTCTGGGATCTTCAATTTGAAAGATTGTTGGTCCCAGCCGGC
TACAACTGTGGATGCTACTCTTTGATTGAATCTCTGCAGTTTGTGTTGCATGTTCGTAATGTTTATGGGAATTCTTTTGTCGAGGTGCGCATAAGCTGGCCTAGACACTC
ACGGATATTAAAAAAAAAGTTTATGGAATCCTTTTTCATTAACTTGAGGCGTGAGGAATGGCGTCAAATGCTTGTGACAGATGAGCGACATCTTATCGAGTGCTCGTGGG
AGTTCTCTTCCGTGCTCGTAAGTGGTATTTTCTTGCTGTGGTGAATACTATATCGACTACCCATTTCCACGGTTTCCTAGATTTATCGTGTTCGTGTTCATGTTCAAGTT
GGTAGTGTTCCTGAGGTTTGGCATTGGATGTCACGCCTGCCCGCCCACATGCTGAATTCCTTTCCATCTTAGTACGCTATTGCTAGGTCTTTTTGCTACATAATTATGCA
TGTCCTATGTAGTTGAAACACCTAGCAATAGGTTAGCAGGGTGCCGCAGTTTGTGGGCTTTAAGGACATAGTGTTATGACAAGTGGTATCAAAGCTAAAGGTTCAGCCAA
GGGCTAGTGCGAAAAAGTCGTAGGCTAGTGTCGCCGAAGAGGCTTGACAGGAGCAGACTCTTAATCGTGTGGAAGCCTTGTTACACTTCTTTTCCAGACATGAACTCATA
GGTTTGTAATCGGGATGTCGAGTTTTCCTCTGATTAACCGTATTCTTAATTTGAAGATGCATGTTGTTCTACAAGCATAACAGGAAATGCTTATGAATTTTCCTATTGAT
GTATTACAACTTCCAATTAGCTGGTATGGGGGATGTCTTTATTTTCGCAAAAATTATTCTACCTTTTCATCATTTTCTTCGTCCATCGATATATTTGAGTATTTGAGAAT
TTGTACTTATGAATTATTGAGGATAAAGCTCAATTATTAATGAGCTAAGTGG
Protein sequenceShow/hide protein sequence
MSRVYVGNLDPRVSERELEDEFRVFGVIRSVWVARRPPGYAFVDFDDPRDARDAIHELDGKNGWRIELSHNSRGGGGGGGRGGGGGGRGRSGGSDLKCYECGEPGHFARE
CRSRGGGGAGGGGGGAGRRRSRSPRYRRSPSYGRRSYSPRGRSPRRRSLSPRGRSLSRSPPYRGREELPYANGNGVKDRRRSRS