; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003115 (gene) of Chayote v1 genome

Gene IDSed0003115
OrganismSechium edule (Chayote v1)
Descriptionhistone deacetylase complex subunit SAP18-like
Genome locationLG02:51622766..51625864
RNA-Seq ExpressionSed0003115
SyntenySed0003115
Gene Ontology termsGO:0045892 - negative regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003714 - transcription corepressor activity (molecular function)
InterPro domainsIPR010516 - Sin3 associated polypeptide p18
IPR042534 - Sin3 associated polypeptide p18 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022147400.1 histone deacetylase complex subunit SAP18 [Momordica charantia]2.1e-6585.23Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR  P    RPRL+PVDREKTCPLLLRVFTK+G HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GRLDDSLALA++GFQIGDYLDVAI+
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

XP_022943948.1 histone deacetylase complex subunit SAP18-like [Cucurbita moschata]9.6e-6686.58Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GR DD+LALA++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

XP_022974173.1 histone deacetylase complex subunit SAP18-like [Cucurbita maxima]9.6e-6686.58Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GR DD+LALA++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

XP_023538738.1 histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]9.6e-6686.58Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GR DD+LALA++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

XP_038879427.1 histone deacetylase complex subunit SAP18 [Benincasa hispida]1.4e-6485.91Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGA PRA+  A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFV+REVGKTFSFG GRLDDSLALA++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

TrEMBL top hitse value%identityAlignment
A0A1S3AVL4 histone deacetylase complex subunit SAP181.1e-6485.23Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPRA   A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFV+REVGKTFSFG  RLDDSLAL ++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

A0A5D3D2K7 Histone deacetylase complex subunit SAP181.1e-6485.23Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPRA   A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFV+REVGKTFSFG  RLDDSLAL ++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

A0A6J1D024 histone deacetylase complex subunit SAP181.0e-6585.23Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR  P    RPRL+PVDREKTCPLLLRVFTK+G HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GRLDDSLALA++GFQIGDYLDVAI+
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

A0A6J1FXI8 histone deacetylase complex subunit SAP18-like4.6e-6686.58Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GR DD+LALA++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

A0A6J1IFF7 histone deacetylase complex subunit SAP18-like4.6e-6686.58Show/hide
Query:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF
        MAGE EAPR AYGAPPR AP A  RPRL+PVDREKTCPLLLRVFTKIG HHF++DF+VRGKEPRDEVQIYTWKDATLRELTDLVK+V PEA RRNAKLSF
Subjt:  MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSF

Query:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII
        ALVYPDR+GRFVVREVGKTFSFG GR DD+LALA++GFQIGDYLDVAII
Subjt:  ALVYPDRYGRFVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII

SwissProt top hitse value%identityAlignment
O00422 Histone deacetylase complex subunit SAP181.7e-2856.2Show/hide
Query:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL
        P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V PEA ++    +FA+V+ D +   + V+E+G T S G    
Subjt:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL

Query:  DDSLALADIGFQIGDYLDVAI
        DDS+ L    FQIGDYLD+AI
Subjt:  DDSLALADIGFQIGDYLDVAI

O55128 Histone deacetylase complex subunit SAP182.2e-2856.2Show/hide
Query:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL
        P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V PEA ++    +FA+V+ D +   + V+E+G T S G    
Subjt:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL

Query:  DDSLALADIGFQIGDYLDVAI
        DDS+ L    FQIGDYLD+AI
Subjt:  DDSLALADIGFQIGDYLDVAI

O64644 Histone deacetylase complex subunit SAP181.4e-4365.19Show/hide
Query:  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVR
        PPR   Q   RP+ +PVDREKTCPLLLRVFTK G HH S+D++VRGKEP+DEVQIYTWKDA+LRELTDLVK+V   A RRNA+LSFA VYP+  G + VR
Subjt:  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVR

Query:  EVGKTFSFGTGRL-DDSLALADIGFQIGDYLDVAI
        EVG+T ++   +  DDS  L+++ F+IGDYLDVAI
Subjt:  EVGKTFSFGTGRL-DDSLALADIGFQIGDYLDVAI

Q3T022 Histone deacetylase complex subunit SAP181.7e-2856.2Show/hide
Query:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL
        P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V PEA ++    +FA+V+ D +   + V+E+G T S G    
Subjt:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL

Query:  DDSLALADIGFQIGDYLDVAI
        DDS+ L    FQIGDYLD+AI
Subjt:  DDSLALADIGFQIGDYLDVAI

Q5RDT5 Histone deacetylase complex subunit SAP181.7e-2856.2Show/hide
Query:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL
        P+DREKTCPLLLRVF T  GRHH   +FS RG  P  E+QIYTW DATL+ELT LVK+V PEA ++    +FA+V+ D +   + V+E+G T S G    
Subjt:  PVDREKTCPLLLRVF-TKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPD-RYGRFVVREVGKTFSFGTGRL

Query:  DDSLALADIGFQIGDYLDVAI
        DDS+ L    FQIGDYLD+AI
Subjt:  DDSLALADIGFQIGDYLDVAI

Arabidopsis top hitse value%identityAlignment
AT2G45640.1 SIN3 associated polypeptide P181.0e-4465.19Show/hide
Query:  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVR
        PPR   Q   RP+ +PVDREKTCPLLLRVFTK G HH S+D++VRGKEP+DEVQIYTWKDA+LRELTDLVK+V   A RRNA+LSFA VYP+  G + VR
Subjt:  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVR

Query:  EVGKTFSFGTGRL-DDSLALADIGFQIGDYLDVAI
        EVG+T ++   +  DDS  L+++ F+IGDYLDVAI
Subjt:  EVGKTFSFGTGRL-DDSLALADIGFQIGDYLDVAI

AT2G45640.2 SIN3 associated polypeptide P187.9e-4262.96Show/hide
Query:  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVR
        PPR   Q   RP+ +PVDREKTCPLLLRVFTK G HH S+D++VRGKEP+DEVQIYTWKDA+LRELTDLVK+V   A RRNA+LSFA VYP+  G +   
Subjt:  PPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGRFVVR

Query:  EVGKTFSFGTGRL-DDSLALADIGFQIGDYLDVAI
         VG+T ++   +  DDS  L+++ F+IGDYLDVAI
Subjt:  EVGKTFSFGTGRL-DDSLALADIGFQIGDYLDVAI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGAGAACCAGAAGCGCCAAGGACGGCTTATGGCGCTCCTCCAAGAGCAGCACCTCAGGCTCATCACCGTCCCCGCTTGGACCCCGTCGATCGCGAAAAGACTTG
TCCTTTGCTGCTTCGCGTTTTTACCAAGATCGGGAGACACCATTTCAGCCAAGACTTTTCTGTGAGGGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAG
ATGCTACTCTTCGTGAACTGACTGATCTGGTTAAAGATGTAGTTCCGGAAGCCACAAGGAGAAATGCTAAACTATCTTTCGCATTGGTGTATCCCGATAGATATGGCCGG
TTTGTAGTGAGAGAGGTAGGGAAGACATTCTCGTTCGGAACTGGACGGTTAGACGATAGCTTAGCTTTGGCAGACATCGGTTTTCAAATTGGAGATTACTTGGATGTGGC
AATTATATAG
mRNA sequenceShow/hide mRNA sequence
CCGAATTTCAAGGCCCAAGGATGGGCCTCGCCTATAAATAGGCGAAGCTTACGGAAGGTGAAGAAACATAGAGAGAAATGGCGGGAGAACCAGAAGCGCCAAGGACGGCT
TATGGCGCTCCTCCAAGAGCAGCACCTCAGGCTCATCACCGTCCCCGCTTGGACCCCGTCGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGCGTTTTTACCAAGATCGG
GAGACACCATTTCAGCCAAGACTTTTCTGTGAGGGGCAAGGAGCCGAGGGACGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGTGAACTGACTGATCTGGTTA
AAGATGTAGTTCCGGAAGCCACAAGGAGAAATGCTAAACTATCTTTCGCATTGGTGTATCCCGATAGATATGGCCGGTTTGTAGTGAGAGAGGTAGGGAAGACATTCTCG
TTCGGAACTGGACGGTTAGACGATAGCTTAGCTTTGGCAGACATCGGTTTTCAAATTGGAGATTACTTGGATGTGGCAATTATATAGGGCATTTTCGTGCCTCTATGTCG
TAACATATGCCTTGTCGACCGGAAAGAGGTTTTGCAATCCGTTTTCCTAGCCAAGAACCAAACGAAGGTGGATATTTAGCTTTAGTCTTGTTATGTATATACCATAATGT
GTGTGATAATCCTTTACATGTTTGTCCTGTTCTCTTGAGTTTTTTTTAGGTAGAATCATGATAGTCATCGTTTTGTTCTTTTGCGTTGCCTTCTTGTTTTATACCGGCAT
CAGTCTTTCTTTTTGACATGTCTTAGGCATTGGGATAGCTTTTAATGATGGAATGGAACTATTTTAGGCCATATAATGATCTTATTTTTAGTTGAGC
Protein sequenceShow/hide protein sequence
MAGEPEAPRTAYGAPPRAAPQAHHRPRLDPVDREKTCPLLLRVFTKIGRHHFSQDFSVRGKEPRDEVQIYTWKDATLRELTDLVKDVVPEATRRNAKLSFALVYPDRYGR
FVVREVGKTFSFGTGRLDDSLALADIGFQIGDYLDVAII