CuGenDBv2

Gene ID	Sed0003137
Organism	Sechium edule (Chayote v1)
Description	Transcription termination factor MTEF1
Genome location	LG02:48973653..48975037
RNA-Seq Expression	Sed0003137
Synteny	Sed0003137
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process) GO:0003690 - double-stranded DNA binding (molecular function)
InterPro domains	IPR003690 - Transcription termination factor, mitochondrial/chloroplastic IPR038538 - MTERF superfamily, mitochondrial/chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022933338.1 uncharacterized protein LOC111440613 isoform X1 [Cucurbita moschata]

3.8e-77

52.69

Show/hide

Query:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+LS+SSEI S  KS             EKPVIVFFENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP IL RSL++ 
Subjt:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q+L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+LSAF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE
          +E RFL+KFI PH++ IPGLLKLYKEKLE S+
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE

XP_022933339.1 uncharacterized protein LOC111440613 isoform X2 [Cucurbita moschata]

3.8e-77

52.69

Show/hide

Query:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+LS+SSEI S  KS             EKPVIVFFENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP IL RSL++ 
Subjt:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q+L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+LSAF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE
          +E RFL+KFI PH++ IPGLLKLYKEKLE S+
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE

XP_022956116.1 uncharacterized protein LOC111457902 isoform X2 [Cucurbita moschata]

9.5e-76

52.1

Show/hide

Query:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+ S+SSEI S  KS             EKPVIV FENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP IL RSL++ 
Subjt:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q+L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+LSAF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE
          +E RFL+KFI PH++ IPGLLKLYKEKLE S+
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE

XP_022973791.1 transcription termination factor MTERF5, chloroplastic-like [Cucurbita maxima]

3.1e-79

54.65

Show/hide

Query:  RFLSSSSEIVSYTK------------SGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        RFL +SSEIVS  K            S EKPVI+FFENHGFSKSQIS ++KK PQ+LS  PEKTL PKLLFLQSKG+SS +VAKLV GFP IL RSLN+ 
Subjt:  RFLSSSSEIVSYTK------------SGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIPSF+Y  DL Q+EEKTIAAIKRF GLL  DL+ S RPN+E                               + VEEVK MG +PLR  FVLAV AL +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRFFN
        M K  WK+KVE   +WG PEEE+L AFGRHP CMM+S DK+NGVMD+FVNQ+GC                                  LIKK VNL    
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRFFN

Query:  IS-EKRFLEKFIKPHEKHIPGLLKLYKEKLEIS
        +S EKRFL+KFI+PH+K IPGLLKLY EKLE+S
Subjt:  IS-EKRFLEKFIKPHEKHIPGLLKLYKEKLEIS

XP_023521670.1 transcription termination factor MTERF5, chloroplastic-like [Cucurbita pepo subsp. pepo]

7.2e-76

51.26

Show/hide

Query:  RQPLDLAGRLRFSATGVSSQEQGNRFLSSSSEIVSYTK------------SGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKG
        R PL +     FSA+ + S     RFL +SSEIVS  K            S EKPVI+ F+NHGFSKSQIS ++KK PQ+LS  PEKTL PKLLFLQSKG
Subjt:  RQPLDLAGRLRFSATGVSSQEQGNRFLSSSSEIVSYTK------------SGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKG

Query:  ISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESV
        +SS +VAKLV GFP IL RSLN+ IIPSF+Y  DL Q+EEKTIAAIKR  GLL  DL  S RPN+E                               E V
Subjt:  ISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESV

Query:  EEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------
        EEVK MG +PLR  FV+AV AL +M K  WK+KVE   +WG PEEE+L AF RHP CMM+SEDK+NGV+D+FVNQ+GC                      
Subjt:  EEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------

Query:  ------------LIKKDVNLRFFNIS-EKRFLEKFIKPHEKHIPGLLKLYKEKLEIS
                    LIKK VNL    +S EKRFL+KFI+PH+K IP L KLY EKLE+S
Subjt:  ------------LIKKDVNLRFFNIS-EKRFLEKFIKPHEKHIPGLLKLYKEKLEIS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EZH0 uncharacterized protein LOC111440613 isoform X2

1.9e-77

52.69

Show/hide

Query:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+LS+SSEI S  KS             EKPVIVFFENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP IL RSL++ 
Subjt:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q+L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+LSAF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE
          +E RFL+KFI PH++ IPGLLKLYKEKLE S+
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE

A0A6J1F4G8 uncharacterized protein LOC111440613 isoform X1

1.9e-77

52.69

Show/hide

Query:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+LS+SSEI S  KS             EKPVIVFFENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP IL RSL++ 
Subjt:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q+L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+LSAF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE
          +E RFL+KFI PH++ IPGLLKLYKEKLE S+
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE

A0A6J1GVP2 uncharacterized protein LOC111457902 isoform X2

4.6e-76

52.1

Show/hide

Query:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+ S+SSEI S  KS             EKPVIV FENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP IL RSL++ 
Subjt:  RFLSSSSEIVSYTKSG------------EKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q+L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+LSAF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE
          +E RFL+KFI PH++ IPGLLKLYKEKLE S+
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISE

A0A6J1I9L4 transcription termination factor MTERF5, chloroplastic-like

1.5e-79

54.65

Show/hide

Query:  RFLSSSSEIVSYTK------------SGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        RFL +SSEIVS  K            S EKPVI+FFENHGFSKSQIS ++KK PQ+LS  PEKTL PKLLFLQSKG+SS +VAKLV GFP IL RSLN+ 
Subjt:  RFLSSSSEIVSYTK------------SGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIPSF+Y  DL Q+EEKTIAAIKRF GLL  DL+ S RPN+E                               + VEEVK MG +PLR  FVLAV AL +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRFFN
        M K  WK+KVE   +WG PEEE+L AFGRHP CMM+S DK+NGVMD+FVNQ+GC                                  LIKK VNL    
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRFFN

Query:  IS-EKRFLEKFIKPHEKHIPGLLKLYKEKLEIS
        +S EKRFL+KFI+PH+K IPGLLKLY EKLE+S
Subjt:  IS-EKRFLEKFIKPHEKHIPGLLKLYKEKLEIS

A0A6J1IXF7 uncharacterized protein LOC111479414

6.6e-75

52.12

Show/hide

Query:  RFLSSSSEIVSYTKS------------GEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH
        R+ S+SS I S  KS             EKPVIVFFENHGFSK+QIS ++KK PQ+LSA PEKTL PKLLF QSKG+SS ++AKLV GFP ILTRSL++ 
Subjt:  RFLSSSSEIVSYTKS------------GEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKH

Query:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS
        IIP+F Y Q L Q+EEKTIA+IKRFLG+L  DL+   RPN+E                               E VEEVK MG +PLR  FVLAV A+ +
Subjt:  IIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNME-------------------------------ESVEEVKVMGLDPLRYTFVLAVVALLS

Query:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F
        M K  W++KVE   +WG PEEE+L AF RHP CMM+SEDK+NGVMD+FVN++GC                                  LIKKDVNL F F
Subjt:  MKKYAWKRKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRF-F

Query:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKL
          +E RFL+KFI PH+K IPGLLKLYK+KL
Subjt:  NISEKRFLEKFIKPHEKHIPGLLKLYKEKL

SwissProt top hits

e value

%identity

Alignment

F4IHL3 Transcription termination factor MTERF2, chloroplastic

1.5e-04

33.66

Show/hide

Query:  GVSSQEQGNRFLSSSSEIVSYT-KSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHII
        G+S++E G R L+    ++  + +   KP++ +F   G  K  +  IL   P L     EKT+ PK+ FLQ  GI +  +  ++  FP +LT SL K I 
Subjt:  GVSSQEQGNRFLSSSSEIVSYT-KSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHII

Query:  P
        P
Subjt:  P

F4JVI3 Transcription termination factor MTERF5, chloroplastic

3.3e-07

31.67

Show/hide

Query:  YTKSGE-KPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAI
        Y+  G+ KPV+ F  + G  KS I  IL K PQ+        L P + FL++ GI  +  AK++S FP ILT S  K +  +  +      +EE+    +
Subjt:  YTKSGE-KPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAI

Query:  KRFLGLLLVDLRGSVRPNME
         R   ++   +   +RP ME
Subjt:  KRFLGLLLVDLRGSVRPNME

Arabidopsis top hits

e value

%identity

Alignment

AT1G21150.1 Mitochondrial transcription termination factor family protein

2.6e-23

29.92

Show/hide

Query:  SGEKP--VIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAIKR
        S +KP  V+  F++HGF+  QI+ ++K  P++LS  PE  + PKL+F  S G S+ D AK++S  P +L+ SL+K +IP +   + +   EE  +  +KR
Subjt:  SGEKP--VIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAIKR

Query:  FLGLL------LVDLRGSV-------------------------RPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKVEEWGC---PEEEVL
         +          V LR S+                              E +  V   G DP +  FV A+VA     + A +RK + + C    +E+ +
Subjt:  FLGLL------LVDLRGSV-------------------------RPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKVEEWGC---PEEEVL

Query:  SAFGRHPVCMMSSEDKVNGVMDYFVNQMGCLIKKDVNLRFFNISEKRFLEKFIKPHEKHIPGLL
        +A  R P C+  S++K+   ++Y VN +G L  +D+  R   +S    +EK IKP  + I  LL
Subjt:  SAFGRHPVCMMSSEDKVNGVMDYFVNQMGCLIKKDVNLRFFNISEKRFLEKFIKPHEKHIPGLL

AT1G61970.1 Mitochondrial transcription termination factor family protein

6.9e-16

29.57

Show/hide

Query:  SSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQD-LFQS
        S S ++    K+    V+    +HGF+ SQIS I++  PQLL A  EK+L PKL FLQS+G SS ++ ++VS  P IL +  +K I   + + +D L + 
Subjt:  SSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQD-LFQS

Query:  EEKT-----------------IAAIKRFLGL-------LLVDLRGSV--RPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKV---EEWGCP
          K                    ++ R LG+       LL+     V  +   EE++++V  MG DP    FV A+  +  M +   + KV   +  G  
Subjt:  EEKT-----------------IAAIKRFLGL-------LLVDLRGSV--RPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKV---EEWGCP

Query:  EEEVLSAFGRHPVCMMSSEDKVNGVMDYFV
          +V S+F + P+ +  SE K+   ++ F+
Subjt:  EEEVLSAFGRHPVCMMSSEDKVNGVMDYFV

AT1G61970.2 Mitochondrial transcription termination factor family protein

6.9e-16

29.57

Show/hide

Query:  SSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQD-LFQS
        S S ++    K+    V+    +HGF+ SQIS I++  PQLL A  EK+L PKL FLQS+G SS ++ ++VS  P IL +  +K I   + + +D L + 
Subjt:  SSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQD-LFQS

Query:  EEKT-----------------IAAIKRFLGL-------LLVDLRGSV--RPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKV---EEWGCP
          K                    ++ R LG+       LL+     V  +   EE++++V  MG DP    FV A+  +  M +   + KV   +  G  
Subjt:  EEKT-----------------IAAIKRFLGL-------LLVDLRGSV--RPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKV---EEWGCP

Query:  EEEVLSAFGRHPVCMMSSEDKVNGVMDYFV
          +V S+F + P+ +  SE K+   ++ F+
Subjt:  EEEVLSAFGRHPVCMMSSEDKVNGVMDYFV

AT1G61980.1 Mitochondrial transcription termination factor family protein

1.7e-14

31.3

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Query:  SSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQ----DL
        S S ++    K     V+    +HGF+ SQIS I+   PQLL A  EK+L PKL FLQS+G SS ++ ++VS  P IL +  +K I   + + +    D 
Subjt:  SSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQ----DL

Query:  FQSEEKTI--------------AAIKRFLG---------LLLVDLRGSVRPNMEESVEEVKVMGLDPLRYTFV--LAVVALLSMKKYAWK-RKVEEWGCP
            EK+                ++ R LG         L+  D+    +   EES+++V  MG DP    FV  L VV  LS K    K    +  G  
Subjt:  FQSEEKTI--------------AAIKRFLG---------LLLVDLRGSVRPNMEESVEEVKVMGLDPLRYTFV--LAVVALLSMKKYAWK-RKVEEWGCP

Query:  EEEVLSAFGRHPVCMMSSEDKVNGVMDYFV
         E V + F R P  +  SE K+   ++ F+
Subjt:  EEEVLSAFGRHPVCMMSSEDKVNGVMDYFV

AT5G07900.1 Mitochondrial transcription termination factor family protein

2.6e-31

31.35

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Query:  LSSSSEIVSYTK----SGEKP--VIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYF
        LS  S  V+  K    S E+P  V+    +HGF+ +QIS ++KK P LL A  E  L PKL F  S G+S   +A+ ++  P ILTRSL   +IPS+++ 
Subjt:  LSSSSEIVSYTK----SGEKP--VIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFLQSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYF

Query:  QDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNMEESVE-------------------------------EVKVMGLDPLRYTFVLAVVALLSM-KKYAWK
        + +  S+EK +AA++R   + L D   ++ PN+    E                               + + MG +P + TFVLA+ AL     K  W 
Subjt:  QDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNMEESVE-------------------------------EVKVMGLDPLRYTFVLAVVALLSM-KKYAWK

Query:  RKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRFFNIS-EKRF
        +  E    WG  E++++ AF +HP CMM SE K+N  M+YFVN+M                                    L+K+D +L    +  EK F
Subjt:  RKVE---EWGCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGC----------------------------------LIKKDVNLRFFNIS-EKRF

Query:  LEKFIKPHEKHIPGLLKLY
        LEK +  +E+ +P L+ LY
Subjt:  LEKFIKPHEKHIPGLLKLY

Sequences

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CDS sequence

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ATGTATACAGTAGAAACCCTAACCATCTTCTTTCTGCGCACTTTTATTTCTTTCGATTTCGCCGTCTTCCATTTTTTCCGGCAGCCTCTTGATCTCGCCGGCCGGCTCCG
TTTCTCTGCTACAGGCGTTTCTTCTCAAGAACAAGGCAACAGATTCTTATCGTCATCTTCCGAGATTGTATCTTATACGAAATCCGGCGAAAAGCCTGTTATTGTGTTCT
TCGAGAATCATGGATTCTCTAAATCACAGATCTCTGTAATTCTCAAGAAATTACCTCAGCTTCTTTCAGCTAAACCCGAGAAAACACTGTTTCCCAAGTTGTTGTTCTTA
CAATCGAAAGGCATTTCTTCCCATGACGTTGCTAAACTAGTTTCGGGCTTTCCTTACATTCTAACACGAAGTTTAAACAAACATATCATTCCATCCTTCCATTACTTTCA
AGACTTGTTTCAATCCGAGGAGAAGACTATTGCAGCCATAAAACGCTTTTTGGGTCTCCTCCTCGTCGATCTTCGAGGCTCTGTTCGTCCCAATATGGAAGAGAGCGTAG
AGGAAGTTAAGGTAATGGGACTTGACCCTCTGCGTTACACGTTTGTTCTTGCTGTTGTTGCTCTGCTATCAATGAAGAAATATGCATGGAAAAGGAAGGTTGAAGAATGG
GGGTGCCCTGAAGAAGAGGTCCTTTCTGCTTTTGGAAGGCATCCAGTTTGTATGATGTCTTCTGAGGATAAGGTTAATGGTGTTATGGATTATTTTGTCAATCAAATGGG
ATGTTTGATTAAGAAAGATGTGAATCTTCGTTTCTTTAACATTAGTGAAAAGAGGTTCTTAGAAAAATTTATCAAGCCTCATGAGAAGCACATTCCTGGATTGTTGAAGT
TGTATAAAGAGAAATTAGAGATTTCTGAAAGCAAGCAGGTTTAA

mRNA sequence

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Protein sequence

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MYTVETLTIFFLRTFISFDFAVFHFFRQPLDLAGRLRFSATGVSSQEQGNRFLSSSSEIVSYTKSGEKPVIVFFENHGFSKSQISVILKKLPQLLSAKPEKTLFPKLLFL
QSKGISSHDVAKLVSGFPYILTRSLNKHIIPSFHYFQDLFQSEEKTIAAIKRFLGLLLVDLRGSVRPNMEESVEEVKVMGLDPLRYTFVLAVVALLSMKKYAWKRKVEEW
GCPEEEVLSAFGRHPVCMMSSEDKVNGVMDYFVNQMGCLIKKDVNLRFFNISEKRFLEKFIKPHEKHIPGLLKLYKEKLEISESKQV

Sed0003137 (gene) of Chayote v1 genome