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Sed0003152 (gene) of Chayote v1 genome

Gene IDSed0003152
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L31
Genome locationLG03:11727197..11728952
RNA-Seq ExpressionSed0003152
SyntenySed0003152
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000054 - Ribosomal protein L31e
IPR020052 - Ribosomal protein L31e, conserved site
IPR023621 - Ribosomal protein L31e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON32288.1 Ribosomal protein [Parasponia andersonii]2.3e-5494.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VVTREYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGT DVRVDVKLNKQIWSRGIR VPRRVRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

PSS20815.1 60S ribosomal protein [Actinidia chinensis var. chinensis]2.3e-5494.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VVTREYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNK IWSRGIR VPRRVRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

XP_008459190.1 PREDICTED: 60S ribosomal protein L31 [Cucumis melo]1.0e-5494.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

XP_022154770.1 60S ribosomal protein L31 [Momordica charantia]2.7e-5595Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
        +EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

XP_038878471.1 60S ribosomal protein L31 [Benincasa hispida]2.3e-5493.33Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVI+E+D
Subjt:  TEIPAEGLKGLGTKVIEEDD

TrEMBL top hitse value%identityAlignment
A0A1S3C9P7 60S ribosomal protein L315.0e-5594.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

A0A5D3CKL3 60S ribosomal protein L315.0e-5594.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

A0A6J1DKK4 60S ribosomal protein L311.3e-5595Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
        +EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

A0A6J1G2V4 60S ribosomal protein L315.0e-5594.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

A0A6J1KK05 60S ribosomal protein L315.0e-5594.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VV+REYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNK IWSRGIR VPRR+RVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPAEGLKGLGTKVIEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

SwissProt top hitse value%identityAlignment
P46290 60S ribosomal protein L311.4e-5489.17Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        M +K KGRKE+VVTREYTINLHKRLH CTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIR VPRRVRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         EIPA+GLKGLGTK+IE++D
Subjt:  TEIPAEGLKGLGTKVIEEDD

P51420 60S ribosomal protein L31-39.9e-5385.71Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        + + KGRKE+V+TREYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWS+GIRG PRR+RVR+ARKRNDDEDAKEE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTKVIEE+D
Subjt:  EIPAEGLKGLGTKVIEEDD

Q9MAV7 60S ribosomal protein L312.4e-5490Show/hide
Query:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV
        MVEK KGRKE+VVTREYTINLHKRLHGCTFKKKAP AIKEIRKFA+KAMGTKDVRVDVKLNKQIWSRGIR VPRRVRVRIARKRNDDEDAKEELYSLVTV
Subjt:  MVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTV

Query:  TEIPAEGLKGLGTKVIEEDD
         +IPA  LKGLG ++IEEDD
Subjt:  TEIPAEGLKGLGTKVIEEDD

Q9SLL7 60S ribosomal protein L31-12.9e-5285.71Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        +EK KGRKE+VVTREYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNKQIWS+GIRG PRR+RVR+ARKRNDDEDAKEE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTKVIEE++
Subjt:  EIPAEGLKGLGTKVIEEDD

Q9STR1 60S ribosomal protein L31-22.2e-5284.87Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        + + KGRKE+VVTREYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNKQIWS+GIRG PRR+RVR+ARKRNDDEDAKEE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTK+IEE+D
Subjt:  EIPAEGLKGLGTKVIEEDD

Arabidopsis top hitse value%identityAlignment
AT2G19740.1 Ribosomal protein L31e family protein2.1e-5385.71Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        +EK KGRKE+VVTREYTINLH+RLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLNKQIWS+GIRG PRR+RVR+ARKRNDDEDAKEE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTKVIEE++
Subjt:  EIPAEGLKGLGTKVIEEDD

AT4G26230.1 Ribosomal protein L31e family protein1.6e-5384.87Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        + + KGRKE+VVTREYTINLH+RLH CTFKKKAPKAIKEIRKFAEK MGTKDVRVDVKLNKQIWS+GIRG PRR+RVR+ARKRNDDEDAKEE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTK+IEE+D
Subjt:  EIPAEGLKGLGTKVIEEDD

AT5G56710.1 Ribosomal protein L31e family protein7.1e-5485.71Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        + + KGRKE+V+TREYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWS+GIRG PRR+RVR+ARKRNDDEDAKEE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTKVIEE+D
Subjt:  EIPAEGLKGLGTKVIEEDD

AT5G56710.2 Ribosomal protein L31e family protein2.4e-3060.5Show/hide
Query:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT
        + + KGRKE+V+TREYTINLH+RLH CTFKKKAPKAIKEIRKFAEKAMGTKDVRVD                                  EE +SLVTV 
Subjt:  VEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVRVRIARKRNDDEDAKEELYSLVTVT

Query:  EIPAEGLKGLGTKVIEEDD
        EIPAEGL GLGTKVIEE+D
Subjt:  EIPAEGLKGLGTKVIEEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTACAGATTAGGGCTACTTGCTGCGTATCTCTTCTGTTGGAGGCCGCTGCTTTTCCCGTCGCCGAACGCCAGGTGCTTTAGTAAAGATCTAACAATGGTGGAGAA
GGCCAAAGGCAGGAAGGAGAAGGTTGTTACCAGAGAGTACACTATTAACCTTCACAAGCGCCTCCATGGCTGCACATTTAAGAAGAAGGCTCCTAAGGCCATAAAGGAGA
TCAGGAAGTTTGCTGAGAAGGCTATGGGTACAAAGGATGTGAGAGTGGACGTGAAGCTGAACAAGCAAATCTGGAGCAGGGGAATCAGAGGTGTGCCCAGAAGAGTCAGG
GTTCGAATTGCTCGTAAGAGGAATGATGATGAAGATGCGAAGGAAGAGTTGTACTCCCTTGTGACCGTTACAGAAATCCCGGCGGAAGGACTGAAGGGACTCGGAACTAA
AGTCATTGAGGAAGATGATTGA
mRNA sequenceShow/hide mRNA sequence
CCTATATGAGTTACAGATTAGGGCTACTTGCTGCGTATCTCTTCTGTTGGAGGCCGCTGCTTTTCCCGTCGCCGAACGCCAGGTGCTTTAGTAAAGATCTAACAATGGTG
GAGAAGGCCAAAGGCAGGAAGGAGAAGGTTGTTACCAGAGAGTACACTATTAACCTTCACAAGCGCCTCCATGGCTGCACATTTAAGAAGAAGGCTCCTAAGGCCATAAA
GGAGATCAGGAAGTTTGCTGAGAAGGCTATGGGTACAAAGGATGTGAGAGTGGACGTGAAGCTGAACAAGCAAATCTGGAGCAGGGGAATCAGAGGTGTGCCCAGAAGAG
TCAGGGTTCGAATTGCTCGTAAGAGGAATGATGATGAAGATGCGAAGGAAGAGTTGTACTCCCTTGTGACCGTTACAGAAATCCCGGCGGAAGGACTGAAGGGACTCGGA
ACTAAAGTCATTGAGGAAGATGATTGATTTGTCTTCTGTTTTCGAGAAGAGGTGGTAAGATGAGATTAGGTTGTAGTTTTGATTTGTTTAATGAACGAAGACATTCATAT
TTAATTTGCTGTCCTTGGAGACTTTTTTTTGTTACATTAACTCATAGTTCCTGGACTTATAAAGTATTAAGTTCAATTGTTTTTTTGGTTGCGTTAACTGAGCTTTATGT
TAGATTAATTCAATCTGAAAGCAATTTAAACCGAACATATCTCACCTCTATTATTAAGCAATCTATTTGCCATCCGGGTTGGATTGTTTGGATTAGGATGTTGATCACAG
GAG
Protein sequenceShow/hide protein sequence
MSYRLGLLAAYLFCWRPLLFPSPNARCFSKDLTMVEKAKGRKEKVVTREYTINLHKRLHGCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLNKQIWSRGIRGVPRRVR
VRIARKRNDDEDAKEELYSLVTVTEIPAEGLKGLGTKVIEEDD