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Sed0003161 (gene) of Chayote v1 genome

Gene IDSed0003161
OrganismSechium edule (Chayote v1)
DescriptionDUF4408 domain-containing protein
Genome locationLG08:37295541..37296065
RNA-Seq ExpressionSed0003161
SyntenySed0003161
Gene Ontology termsGO:0008643 - carbohydrate transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0051119 - sugar transmembrane transporter activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573141.1 hypothetical protein SDJN03_27028, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3355.11Show/hide
Query:  MGITKMETRSPTRSSSPVNNIINNFLLCFLATLFFSLLWILPF--YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNGNFAETFSIG
        M +T ++TR     SS + NI     LCFL  LFF LL  LP   YSINFPTP  VFI+GNLIV VLIGESK  +SKS D F +N CF +G      ++ 
Subjt:  MGITKMETRSPTRSSSPVNNIINNFLLCFLATLFFSLLWILPF--YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNGNFAETFSIG

Query:  EGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGYKSL
         G  E++ LK C      DD+E EMG  NCE+LSKRADDFIARVNMQREIE  +  FC ELKT K K+RKK  K L
Subjt:  EGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGYKSL

KAG7012326.1 hypothetical protein SDJN02_25078, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-3355.11Show/hide
Query:  MGITKMETRSPTRSSSPVNNIINNFLLCFLATLFFSLLWILPF--YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNGNFAETFSIG
        M +T ++TR     SS + NI     LCFL  LFF LL  LP   YSINFPTP  VFI+GNLIV VLIGESK  +SKS D F +N CF +G      ++ 
Subjt:  MGITKMETRSPTRSSSPVNNIINNFLLCFLATLFFSLLWILPF--YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNGNFAETFSIG

Query:  EGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGYKSL
         G  E++ LK C      DD+E EMG  NCE+LSKRADDFIARVNMQREIE  +  FC ELKT K K+RKK  K L
Subjt:  EGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGYKSL

KGN64433.2 hypothetical protein Csa_013667 [Cucumis sativus]1.1e-2856.44Show/hide
Query:  MGITKMETRSPTRSS-SPVNNIINNFLL--CFLATLFFSLLWILPF--------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNG
        MG+TK+ET S ++S+ SPVNNII N LL  CFL     +LLWILP         Y INFPTPTFVFILGNLIV +LIGESK  SS + D FG + CF +G
Subjt:  MGITKMETRSPTRSS-SPVNNIINNFLL--CFLATLFFSLLWILPF--------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNG

Query:  NFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFM
        +F ET  + EG+ + ++ +S DE+DE + E +     N EELSKRADDFIARVNMQR+IE  M
Subjt:  NFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFM

XP_008446247.1 PREDICTED: uncharacterized protein LOC103489033 [Cucumis melo]5.3e-3151.06Show/hide
Query:  METRSPTRSS-SPVNN-IINNFLLCFLATLFFSLLWILPF--------------------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNN
        +++ S ++S+ SPVNN IIN  LL FL  LF +LLWI+P                     Y INFPTPTFVFILGNLIV +LIGESK  SS + D FG +
Subjt:  METRSPTRSS-SPVNN-IINNFLLCFLATLFFSLLWILPF--------------------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNN

Query:  FCFVNGNFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY
         CF  G+F ET S+ EG+Q+ ++ +S DE+DE + E +     N EELSKRADDFIARVNMQR+IE  M  +C ++ T KK++RKK Y
Subjt:  FCFVNGNFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY

XP_011660360.1 uncharacterized protein LOC105436383 [Cucumis sativus]3.3e-3354.4Show/hide
Query:  MGITKMETRSPTRSS-SPVNNIINNFLL--CFLATLFFSLLWILPF--------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNG
        MG+TK+ET S ++S+ SPVNNII N LL  CFL     +LLWILP         Y INFPTPTFVFILGNLIV +LIGESK  SS + D FG + CF +G
Subjt:  MGITKMETRSPTRSS-SPVNNIINNFLL--CFLATLFFSLLWILPF--------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNG

Query:  NFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY
        +F ET  + EG+ + ++ +S DE+DE + E +     N EELSKRADDFIARVNMQR+IE  M  +C ++ T+KK++ KK Y
Subjt:  NFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY

TrEMBL top hitse value%identityAlignment
A0A0A0LWQ9 Uncharacterized protein1.6e-3354.4Show/hide
Query:  MGITKMETRSPTRSS-SPVNNIINNFLL--CFLATLFFSLLWILPF--------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNG
        MG+TK+ET S ++S+ SPVNNII N LL  CFL     +LLWILP         Y INFPTPTFVFILGNLIV +LIGESK  SS + D FG + CF +G
Subjt:  MGITKMETRSPTRSS-SPVNNIINNFLL--CFLATLFFSLLWILPF--------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNG

Query:  NFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY
        +F ET  + EG+ + ++ +S DE+DE + E +     N EELSKRADDFIARVNMQR+IE  M  +C ++ T+KK++ KK Y
Subjt:  NFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY

A0A1S3BFF3 uncharacterized protein LOC1034890332.5e-3151.06Show/hide
Query:  METRSPTRSS-SPVNN-IINNFLLCFLATLFFSLLWILPF--------------------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNN
        +++ S ++S+ SPVNN IIN  LL FL  LF +LLWI+P                     Y INFPTPTFVFILGNLIV +LIGESK  SS + D FG +
Subjt:  METRSPTRSS-SPVNN-IINNFLLCFLATLFFSLLWILPF--------------------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNN

Query:  FCFVNGNFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY
         CF  G+F ET S+ EG+Q+ ++ +S DE+DE + E +     N EELSKRADDFIARVNMQR+IE  M  +C ++ T KK++RKK Y
Subjt:  FCFVNGNFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY

A0A5A7UM42 Protoheme IX farnesyltransferase2.5e-3151.06Show/hide
Query:  METRSPTRSS-SPVNN-IINNFLLCFLATLFFSLLWILPF--------------------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNN
        +++ S ++S+ SPVNN IIN  LL FL  LF +LLWI+P                     Y INFPTPTFVFILGNLIV +LIGESK  SS + D FG +
Subjt:  METRSPTRSS-SPVNN-IINNFLLCFLATLFFSLLWILPF--------------------YSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNN

Query:  FCFVNGNFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY
         CF  G+F ET S+ EG+Q+ ++ +S DE+DE + E +     N EELSKRADDFIARVNMQR+IE  M  +C ++ T KK++RKK Y
Subjt:  FCFVNGNFAETFSIGEGEQEDKSLKSCDEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGY

A0A6J1CA01 uncharacterized protein LOC1110088101.3e-1948.43Show/hide
Query:  NNIINNFLLCFLATL-----FFSLLWILPFYSINFPTPT-FVFILGNLIVAVLIGESKTNSSKSLD--LFGNNFCFVNGNFAETFSIGEGEQEDKSLKSC
        NNII++FLL FL  L     FF   WILPF   +  TPT  VF+LGNLIVAVL+GESK  S K+ D  +  ++ C  +G+F E  SIGE E +      C
Subjt:  NNIINNFLLCFLATL-----FFSLLWILPFYSINFPTPT-FVFILGNLIVAVLIGESKTNSSKSLD--LFGNNFCFVNGNFAETFSIGEGEQEDKSLKSC

Query:  DEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKK
        DE +  D+ E+    G+ EELS+RADDFIARVNMQR+IE  + ++  E  T+ KK+R++
Subjt:  DEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKK

A0A7J0H2V4 Uncharacterized protein2.2e-0635.76Show/hide
Query:  IINNFLLCFLATLFFSLLWILPFY------------SINFP-------TPTFVFILGNLIVAVLIGESKTNSSKSL-DLFGNNFCFVNGNFAET-FSIGE
        ++NN LL  L TL  SL    PF+            S++ P       T  F FI+GNLIV  L+GESK  SS S  D++ + +     N  E  F    
Subjt:  IINNFLLCFLATLFFSLLWILPFY------------SINFP-------TPTFVFILGNLIVAVLIGESKTNSSKSL-DLFGNNFCFVNGNFAET-FSIGE

Query:  GEQEDKSLKSCDEDDES-------DDEELEMGFG-NCEELSKRADDFIARVNMQREIETFMFTFC
         E+ D ++ S  E+D+        D++E   GFG   EE++KRADDFI+RV  QR +E++    C
Subjt:  GEQEDKSLKSCDEDDES-------DDEELEMGFG-NCEELSKRADDFIARVNMQREIETFMFTFC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTACAAAGATGGAAACAAGATCTCCAACAAGATCATCCTCCCCTGTAAATAATATCATCAACAACTTCCTCCTCTGTTTTCTCGCTACTCTGTTTTTTAGCCT
CTTATGGATTCTTCCATTTTACTCAATCAATTTTCCCACACCCACTTTCGTTTTCATCCTTGGAAATCTCATCGTCGCTGTTCTTATCGGTGAATCCAAAACAAATTCCT
CAAAAAGTTTGGATCTTTTTGGAAACAATTTCTGTTTTGTTAATGGGAATTTTGCAGAGACCTTTTCGATTGGTGAAGGAGAACAAGAAGATAAGAGTTTGAAGAGTTGT
GATGAAGATGATGAAAGTGATGATGAAGAATTGGAGATGGGTTTTGGGAATTGTGAGGAATTGAGTAAGAGGGCTGATGATTTTATTGCTAGAGTCAATATGCAGAGAGA
GATTGAAACTTTTATGTTTACTTTTTGTGATGAATTGAAGACTGTGAAGAAAAAACATAGAAAGAAAGGCTATAAGTCTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTACAAAGATGGAAACAAGATCTCCAACAAGATCATCCTCCCCTGTAAATAATATCATCAACAACTTCCTCCTCTGTTTTCTCGCTACTCTGTTTTTTAGCCT
CTTATGGATTCTTCCATTTTACTCAATCAATTTTCCCACACCCACTTTCGTTTTCATCCTTGGAAATCTCATCGTCGCTGTTCTTATCGGTGAATCCAAAACAAATTCCT
CAAAAAGTTTGGATCTTTTTGGAAACAATTTCTGTTTTGTTAATGGGAATTTTGCAGAGACCTTTTCGATTGGTGAAGGAGAACAAGAAGATAAGAGTTTGAAGAGTTGT
GATGAAGATGATGAAAGTGATGATGAAGAATTGGAGATGGGTTTTGGGAATTGTGAGGAATTGAGTAAGAGGGCTGATGATTTTATTGCTAGAGTCAATATGCAGAGAGA
GATTGAAACTTTTATGTTTACTTTTTGTGATGAATTGAAGACTGTGAAGAAAAAACATAGAAAGAAAGGCTATAAGTCTTTGTAA
Protein sequenceShow/hide protein sequence
MGITKMETRSPTRSSSPVNNIINNFLLCFLATLFFSLLWILPFYSINFPTPTFVFILGNLIVAVLIGESKTNSSKSLDLFGNNFCFVNGNFAETFSIGEGEQEDKSLKSC
DEDDESDDEELEMGFGNCEELSKRADDFIARVNMQREIETFMFTFCDELKTVKKKHRKKGYKSL