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Sed0003171 (gene) of Chayote v1 genome

Gene IDSed0003171
OrganismSechium edule (Chayote v1)
DescriptionWD repeat-containing protein 25
Genome locationLG07:31439263..31439493
RNA-Seq ExpressionSed0003171
SyntenySed0003171
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600751.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. sororia]1.0e-1065.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPS+C +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS QSST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

KAG7031391.1 WD repeat-containing protein 25, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-1065.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPS+C +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS QSST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

XP_022941667.1 WD repeat-containing protein 25 [Cucurbita moschata]2.2e-1065.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPSH  +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS QSST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

XP_022992622.1 WD repeat-containing protein 25 [Cucurbita maxima]7.7e-1165.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPSHC +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS Q ST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

XP_023526021.1 WD repeat-containing protein 25 [Cucurbita pepo subsp. pepo]2.2e-1065.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPSH  +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS QSST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

TrEMBL top hitse value%identityAlignment
A0A0A0L2H7 Uncharacterized protein1.3e-0857.58Show/hide
Query:  FHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSSTGICSFLFFS
        F P  R  HCS+ NSE    IMVP  YVSKRERAL SS P S A +S   PSFQ+  GIC F  FS
Subjt:  FHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSSTGICSFLFFS

A0A5A7U0J5 WD repeat-containing protein 25 isoform X21.9e-0761.82Show/hide
Query:  FHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQS
        F P  RPSHCS  N +P   IMVP  Y+SKRERAL SSAP S A ES   PS QS
Subjt:  FHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQS

A0A6J1CMQ5 WD repeat-containing protein 253.8e-0857.81Show/hide
Query:  PFQQHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        P  +   F P+F+PS   + NSEPQ GIMVP  YVSKRERAL  +APVS A +S L PS  SST
Subjt:  PFQQHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

A0A6J1FN47 WD repeat-containing protein 251.1e-1065.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPSH  +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS QSST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

A0A6J1JQD9 WD repeat-containing protein 253.7e-1165.57Show/hide
Query:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST
        +H  F P FRPSHC +  SEPQ  IMVP  Y+SKRERAL SSAPVS A ES L PS Q ST
Subjt:  QHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSST

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTACCTTTCCAGCAACATCCCACATTCCATCCACAGTTCCGCCCATCACATTGCTCAGAATTGAATTCAGAGCCTCAAATGGGTATTATGGTCCCTAGACATTACGT
TTCCAAGAGAGAGCGAGCACTCTCAAGTTCAGCTCCAGTATCTATGGCTCTAGAATCACTTCTGATTCCATCCTTCCAATCTTCAACTGGTATCTGTTCTTTTCTATTCT
TTAGCTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTACCTTTCCAGCAACATCCCACATTCCATCCACAGTTCCGCCCATCACATTGCTCAGAATTGAATTCAGAGCCTCAAATGGGTATTATGGTCCCTAGACATTACGT
TTCCAAGAGAGAGCGAGCACTCTCAAGTTCAGCTCCAGTATCTATGGCTCTAGAATCACTTCTGATTCCATCCTTCCAATCTTCAACTGGTATCTGTTCTTTTCTATTCT
TTAGCTTGTAA
Protein sequenceShow/hide protein sequence
MLPFQQHPTFHPQFRPSHCSELNSEPQMGIMVPRHYVSKRERALSSSAPVSMALESLLIPSFQSSTGICSFLFFSL