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Sed0003179 (gene) of Chayote v1 genome

Gene IDSed0003179
OrganismSechium edule (Chayote v1)
Descriptionacanthoscurrin-1-like
Genome locationLG07:1688600..1689405
RNA-Seq ExpressionSed0003179
SyntenySed0003179
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050560.1 acanthoscurrin-1-like [Cucumis melo var. makuwa]9.5e-1157.76Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP
        M K  MALLLALVA  A+ARP   D TF+DQKNF+ +GGVGG+SGIGS+G  FGG+GG IGG GLGGG G GGLGG  G+GGGLGG +GG GGG+GG G 
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP

Query:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP
         +GGLGG +GG                    GLGGG        GGGLGGG GG SG+ YP
Subjt:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP

KAE8646236.1 hypothetical protein Csa_016187 [Cucumis sativus]7.3e-1159.01Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP
        M K  MALLLALVA  A+ARP   D TF+DQKNF+ +GGVGG+SGIG++G  FGGLGG IGG GLGGG G       GGLGGGLGG   G+GGG+GG   
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP

Query:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP
                +GG G G GG+GGT GG         GGGLG GGL GGGLGGG GG SG+ YP
Subjt:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP

XP_011659762.1 glycine-rich protein 5 [Cucumis sativus]7.3e-1159.01Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP
        M K  MALLLALVA  A+ARP   D TF+DQKNF+ +GGVGG+SGIG++G  FGGLGG IGG GLGGG G       GGLGGGLGG   G+GGG+GG   
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP

Query:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP
                +GG G G GG+GGT GG         GGGLG GGL GGGLGGG GG SG+ YP
Subjt:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP

XP_023004890.1 acanthoscurrin-1-like [Cucurbita maxima]1.1e-1161.25Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGG-GPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGG
        M K  MA+LLAL+A  A+ARP   DATF DQKNF+ +GG+GG+SGIGS+G  FGGLGG +GG G GG G GIGGLGG GG G GLG   GGLGGG+ GGG
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGG-GPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGG

Query:  PGSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLP
         G GGLGGT+GGG  G GGLGGT+GGG                  GGG+GG  GGGSGLP
Subjt:  PGSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLP

XP_038898765.1 acanthoscurrin-1-like [Benincasa hispida]9.5e-1164.49Show/hide
Query:  MVKFVMALLLALVA-IAMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGG--NVGGLGG-GIGG
        M K  MALLLALVA   +ARP  N+ATFNDQKNF+ +GGVGG+SGIG +G  FGG+GG IGG GLGGG G       GGLGGGLGG   +GGLGG G  G
Subjt:  MVKFVMALLLALVA-IAMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGG--NVGGLGG-GIGG

Query:  GGPGSGGLGGTIGG--GGPGSGGLGGTIGGGGLGSDGL
        GG G GGLGGTIGG  GG G GGLGG +GGG  G+ G+
Subjt:  GGPGSGGLGGTIGG--GGPGSGGLGGTIGGGGLGSDGL

TrEMBL top hitse value%identityAlignment
A0A0A0K9U1 Uncharacterized protein3.5e-1159.01Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP
        M K  MALLLALVA  A+ARP   D TF+DQKNF+ +GGVGG+SGIG++G  FGGLGG IGG GLGGG G       GGLGGGLGG   G+GGG+GG   
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP

Query:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP
                +GG G G GG+GGT GG         GGGLG GGL GGGLGGG GG SG+ YP
Subjt:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP

A0A1S3CGR1 acanthoscurrin-1-like2.3e-1058.33Show/hide
Query:  MALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGPGSGGL
        MALLLALVA  A+ARP   D TF+DQKNF+ +GGVGG+SGIGS+G  FGG+GG IGG GLGGG G GGLGG  G+GGGLGG +GG GGG+GG G  +GGL
Subjt:  MALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGPGSGGL

Query:  GGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP
        GG +GG                    GLGGG        GGGLGGG GG SG+ YP
Subjt:  GGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP

A0A5A7U5T7 Acanthoscurrin-1-like4.6e-1157.76Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP
        M K  MALLLALVA  A+ARP   D TF+DQKNF+ +GGVGG+SGIGS+G  FGG+GG IGG GLGGG G GGLGG  G+GGGLGG +GG GGG+GG G 
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGP

Query:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP
         +GGLGG +GG                    GLGGG        GGGLGGG GG SG+ YP
Subjt:  GSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP

A0A6J1H8T3 acanthoscurrin-1-like1.7e-1060.62Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGG-GPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGG
        M K  MA+LLAL+A  A+ARP   DATF DQKNF+ +GG+GG+SGIGS+G  FGGLGG +GG G GG G GIGGLGG GG GG       GLGGG+GG  
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGG-GPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGG

Query:  PGSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLP
           GGLGGT+GGG  G GGLGGT+GG      GLGGG        GGG+GG  GGGSGLP
Subjt:  PGSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLP

A0A6J1KVV3 acanthoscurrin-1-like5.4e-1261.25Show/hide
Query:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGG-GPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGG
        M K  MA+LLAL+A  A+ARP   DATF DQKNF+ +GG+GG+SGIGS+G  FGGLGG +GG G GG G GIGGLGG GG G GLG   GGLGGG+ GGG
Subjt:  MVKFVMALLLALVAI-AMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGG-GPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGG

Query:  PGSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLP
         G GGLGGT+GGG  G GGLGGT+GGG                  GGG+GG  GGGSGLP
Subjt:  PGSGGLGGTIGGGGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAAATTTGTCATGGCTTTGCTCTTGGCTCTTGTAGCCATTGCCATGGCTAGACCTATTCAAAATGATGCTACATTCAATGACCAAAAGAACTTCATTGCCTTTGG
CGGGGTCGGTGGCTTTTCGGGTATCGGTAGCAGCGGGCACCTGTTCGGTGGGCTTGGCGGTGGGATCGGAGGGGCTGGCCTCGGTGGTGGGCCTGGCATTGGTGGACTAG
GTGGGTTGGGAGGCCTCGGAGGCGGCTTGGGTGGCAATGTCGGTGGGCTTGGTGGAGGTATTGGAGGCGGAGGGCCCGGTAGCGGTGGCCTCGGTGGAACCATTGGAGGT
GGAGGGCCCGGTAGTGGTGGCCTCGGTGGAACCATTGGAGGTGGAGGGCTCGGCAGTGATGGTCTTGGTGGAGGTGGTCTCGGTGATGGTGGTCTCGGTGGTGGTGGTCT
CGGCGGAGGAGCTGGTGGTGGTTCAGGCCTTCCTTATCCTTAA
mRNA sequenceShow/hide mRNA sequence
GACCAACAACACCACAAAGACAAGTGTAAAGTTTTTTACACAAACAAGAAATTGAAACAAAAATGGTCAAATTTGTCATGGCTTTGCTCTTGGCTCTTGTAGCCATTGCC
ATGGCTAGACCTATTCAAAATGATGCTACATTCAATGACCAAAAGAACTTCATTGCCTTTGGCGGGGTCGGTGGCTTTTCGGGTATCGGTAGCAGCGGGCACCTGTTCGG
TGGGCTTGGCGGTGGGATCGGAGGGGCTGGCCTCGGTGGTGGGCCTGGCATTGGTGGACTAGGTGGGTTGGGAGGCCTCGGAGGCGGCTTGGGTGGCAATGTCGGTGGGC
TTGGTGGAGGTATTGGAGGCGGAGGGCCCGGTAGCGGTGGCCTCGGTGGAACCATTGGAGGTGGAGGGCCCGGTAGTGGTGGCCTCGGTGGAACCATTGGAGGTGGAGGG
CTCGGCAGTGATGGTCTTGGTGGAGGTGGTCTCGGTGATGGTGGTCTCGGTGGTGGTGGTCTCGGCGGAGGAGCTGGTGGTGGTTCAGGCCTTCCTTATCCTTAAGAAAT
TACTTAGTTATGTTTGATTTCTACTAAAAAGTTATTGCAGTTTGAAGTTTATAGTTATTTAAAATTGTGTCAAGAGATGTTATAGTGCTGAGTTGTGTGTTTAGTAACCT
TCTATTAAGATTTGGTTGTGATTATGTTTGTTTGTTCACTTTGTTAGTACAATGCAAACACCTTTCTTTAGTTCATTTTTATTTTTATTATTATATATATAAAAAAGGAA
TGGTTTTGTTGCTATTTGTATACAACAAATATAAAC
Protein sequenceShow/hide protein sequence
MVKFVMALLLALVAIAMARPIQNDATFNDQKNFIAFGGVGGFSGIGSSGHLFGGLGGGIGGAGLGGGPGIGGLGGLGGLGGGLGGNVGGLGGGIGGGGPGSGGLGGTIGG
GGPGSGGLGGTIGGGGLGSDGLGGGGLGDGGLGGGGLGGGAGGGSGLPYP