; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003180 (gene) of Chayote v1 genome

Gene IDSed0003180
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG08:2132157..2132947
RNA-Seq ExpressionSed0003180
SyntenySed0003180
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0058070.1 hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]8.1e-2459.7Show/hide
Query:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP
        M  EKRK   ++   I +K+ +  + TA+ AAEEPTDEEVEEFY++LRRMKQ A+YFGV+RGM+ K+LSAVVAAAA  QE +E      E     AAPAP
Subjt:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP

Query:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG
        A   +RGK  KE VEENGLR LDLNIAV V+SDG
Subjt:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG

KAE8652459.1 hypothetical protein Csa_013196 [Cucumis sativus]4.9e-2961.65Show/hide
Query:  MRTEKRKGLPDNGGGICKKRVKLPETAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAPA
        M  EKRK   +N   I +K+ K  +T   AAEEPTDEEVEEFY++LRRMKQ A+YFGV+RGM+AK+LSAVV AAAADQ++++      +     AAP+PA
Subjt:  MRTEKRKGLPDNGGGICKKRVKLPETAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAPA

Query:  GVERRGKGKEEVEENGLRLDLNIAVPV-ESDGL
         V RRGKGKE VEENGLRLDLNIA+ V +SDGL
Subjt:  GVERRGKGKEEVEENGLRLDLNIAVPV-ESDGL

KAG6589551.1 hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2657.36Show/hide
Query:  KRKGLPDNGGGICKKRVKLPETAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAA--ADQEDEETAARTAEVKTDAAAPAPAGV
        KRK   +N G  C+K+ K  ET AAA +EPTDEEVEEFY +LRRMK+AA+YFGV++GM+ K+L  V AAAA   ++E+E+   + AE +TD A      +
Subjt:  KRKGLPDNGGGICKKRVKLPETAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAA--ADQEDEETAARTAEVKTDAAAPAPAGV

Query:  ERRGKGKEEVEENGLRLDLNIAVPVESDG
        ++ GKGKE V ENGLRLDLNIAV VESDG
Subjt:  ERRGKGKEEVEENGLRLDLNIAVPVESDG

TYK28420.1 hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]8.1e-2459.7Show/hide
Query:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP
        M  EKRK   ++   I +K+ +  + TA+ AAEEPTDEEVEEFY++LRRMKQ A+YFGV+RGM+ K+LSAVVAAAA  QE +E      E     AAPAP
Subjt:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP

Query:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG
        A   +RGK  KE VEENGLR LDLNIAV V+SDG
Subjt:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG

TrEMBL top hitse value%identityAlignment
A0A5A7USD1 Uncharacterized protein3.9e-2459.7Show/hide
Query:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP
        M  EKRK   ++   I +K+ +  + TA+ AAEEPTDEEVEEFY++LRRMKQ A+YFGV+RGM+ K+LSAVVAAAA  QE +E      E     AAPAP
Subjt:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP

Query:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG
        A   +RGK  KE VEENGLR LDLNIAV V+SDG
Subjt:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG

A0A5D3DYW7 Uncharacterized protein3.9e-2459.7Show/hide
Query:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP
        M  EKRK   ++   I +K+ +  + TA+ AAEEPTDEEVEEFY++LRRMKQ A+YFGV+RGM+ K+LSAVVAAAA  QE +E      E     AAPAP
Subjt:  MRTEKRKGLPDNGGGICKKRVKLPE-TAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAP

Query:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG
        A   +RGK  KE VEENGLR LDLNIAV V+SDG
Subjt:  AGVERRGKG-KEEVEENGLR-LDLNIAVPVESDG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGAACTGAAAAGAGAAAAGGGCTGCCGGATAACGGCGGCGGAATTTGCAAAAAGAGGGTTAAGCTGCCGGAGACGGCGGCGGCGGCGGCGGAGGAGCCGACCGACGA
AGAGGTGGAGGAATTTTACGTGTTACTACGGCGGATGAAACAAGCGGCGGATTATTTCGGAGTGAAAAGAGGGATGATGGCCAAGAATTTGAGTGCGGTGGTTGCGGCGG
CGGCGGCTGATCAGGAGGATGAAGAGACGGCGGCGCGCACGGCGGAGGTGAAAACCGATGCGGCGGCGCCGGCGCCGGCGGGTGTGGAACGGCGTGGGAAGGGAAAGGAA
GAGGTGGAGGAAAATGGGTTGCGTTTGGATTTGAATATAGCGGTGCCGGTGGAGAGCGACGGCCTGTGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTCTCCTTACTCTTTATATTCCCATTAATATACCTTTTCTTGAAACATGATTCTTCCTTCCTTTTTCTTTTCTTAAATTCTCTTTCTTTTATTTTTTTCAAGTCA
AAGTGCAAAAATTGAAAAATGAGAACTGAAAAGAGAAAAGGGCTGCCGGATAACGGCGGCGGAATTTGCAAAAAGAGGGTTAAGCTGCCGGAGACGGCGGCGGCGGCGGC
GGAGGAGCCGACCGACGAAGAGGTGGAGGAATTTTACGTGTTACTACGGCGGATGAAACAAGCGGCGGATTATTTCGGAGTGAAAAGAGGGATGATGGCCAAGAATTTGA
GTGCGGTGGTTGCGGCGGCGGCGGCTGATCAGGAGGATGAAGAGACGGCGGCGCGCACGGCGGAGGTGAAAACCGATGCGGCGGCGCCGGCGCCGGCGGGTGTGGAACGG
CGTGGGAAGGGAAAGGAAGAGGTGGAGGAAAATGGGTTGCGTTTGGATTTGAATATAGCGGTGCCGGTGGAGAGCGACGGCCTGTGATCGAAACTTTCCGACGAGATTGA
AATGATCGCCGGCGATAAATTCCGAAGTGGAACAACAAGCACGTGATCTCATAAATATGCGATGCTTTGAGTTTTCTTGTCTTTTTTTCAAGGATCCTAAAAAATTTACT
TTTTTCTTTATAATAATATTGTTGTTACTTTTATTTCCAGATCTGAATATGGTTTTTAGTTGTGGTGATTTTTTTTTTTTATTCATTATTGCTTCTCAATTAAAATTATG
GAAATACTTTTTTAAAAAAAA
Protein sequenceShow/hide protein sequence
MRTEKRKGLPDNGGGICKKRVKLPETAAAAAEEPTDEEVEEFYVLLRRMKQAADYFGVKRGMMAKNLSAVVAAAAADQEDEETAARTAEVKTDAAAPAPAGVERRGKGKE
EVEENGLRLDLNIAVPVESDGL