; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003191 (gene) of Chayote v1 genome

Gene IDSed0003191
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich RNA-binding protein GRP2A-like
Genome locationLG04:30075373..30076081
RNA-Seq ExpressionSed0003191
SyntenySed0003191
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8649249.1 hypothetical protein Csa_015081, partial [Cucumis sativus]2.2e-2043.29Show/hide
Query:  MFDMQPSIILLIICASLLAAVVVLCCFCIFR-GRKKKESTR-PTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYD------
        + D++PSI+++IIC SL+    +LCCFCI   G +KK++ + PTPS S+       P Q Y D+E GQG R YR D+    E+SI  D +G+        
Subjt:  MFDMQPSIILLIICASLLAAVVVLCCFCIFR-GRKKKESTR-PTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYD------

Query:  ------RSEEHSI----RSSRRSEPSV-----------RQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADY--
              ++ E SI    RSSRR+E S+           + DRQ  R S IKDGGMAILAGAGAA+ATAA  LGLSS +G      G+D   DGD+ D   
Subjt:  ------RSEEHSI----RSSRRSEPSV-----------RQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADY--

Query:  EGGVGGGICGAGCGGVGGSACAAGCGNSSQL
        +G  GGG+ G   GGVG ++     GN SQL
Subjt:  EGGVGGGICGAGCGGVGGSACAAGCGNSSQL

KAG6600486.1 hypothetical protein SDJN03_05719, partial [Cucurbita argyrosperma subsp. sororia]2.0e-5063.43Show/hide
Query:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR---PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEH
        MFD++PSII+LIICASLLAAVV+LCC CI RGRK+K+STRPTPSGS+SSR   PPPWPRQ YYDVE GQG RA+R DT  S EQS+  DR GA  RSE++
Subjt:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR---PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEH

Query:  SI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRD-------GD---HADYEGGV-GGGICGAG
        S      RSS+ SEPSV +D++    SG KDGGMAI AGAGAAMA AAA LGLSSG G+EY G GD Y  D       GD   + + +GG  GGG+CGAG
Subjt:  SI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRD-------GD---HADYEGGV-GGGICGAG

Query:  CGGVGGSACAAGCGNS
        CG VGGSAC +  GN+
Subjt:  CGGVGGSACAAGCGNS

XP_022142785.1 ctenidin-3-like [Momordica charantia]6.3e-2043.52Show/hide
Query:  MQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTP--SGSVSSRPPPWPRQLY--YDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEHSI
        M+P   +LIIC+S++AAVV+LCC CI  GRKKKE+ R TP  S ++ SR  PWPRQ Y  +D+E GQG R                              
Subjt:  MQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTP--SGSVSSRPPPWPRQLY--YDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEHSI

Query:  RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSS-GRGEEY------DGYGDDYSRDGDHADYEGG--------VGGGICGAGCGG
                    +RQG RGSGIKDGGMAILAGAG A+ATAA   GLSS GR   Y       G  D Y  DG   D +GG         GGG CG G GG
Subjt:  RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSS-GRGEEY------DGYGDDYSRDGDHADYEGG--------VGGGICGAGCGG

Query:  VGGSACAAGCGNSSQL
         G      GCG  S+L
Subjt:  VGGSACAAGCGNSSQL

XP_022942031.1 glycine-rich RNA-binding protein GRP2A-like [Cucurbita moschata]9.0e-5162.67Show/hide
Query:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR----PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEE
        MFD++PSII+LIICASLLAAVV+LCC CI RGRK+K+STRPTPSGS+SSR    PPPWPRQ YYDVE GQG RAYR DT  S EQS+  DR GA  RSE+
Subjt:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR----PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEE

Query:  HSI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHAD----------YEGGV-GGGICGA
        +S      RS++ SEPSV +D++    SG KDGGMAI AGAGAAMA AAA LGLSSG G+EY G GD Y  D    D           +GG  GGG+CGA
Subjt:  HSI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHAD----------YEGGV-GGGICGA

Query:  GCGGVGGSACAAGCGNS
        GCG VGGSAC +  GN+
Subjt:  GCGGVGGSACAAGCGNS

XP_023543717.1 glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo]4.8e-5263.89Show/hide
Query:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR---PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEH
        MFD++PSII+LIICASLLAAVV+LCC CI RGR++K+STRPTPSGS+SSR   PPPWPRQ YYDVE GQG RAYR DT  S EQS+  DR GA  RSE +
Subjt:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR---PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEH

Query:  SI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHAD----------YEGGV-GGGICGAG
        S      RSS+ SEPSV +D+Q    SG KDGGMAILAGAGAAMA AAA +GLSSG G+EY G GD Y  DG   D           +GG  GGG+CGAG
Subjt:  SI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHAD----------YEGGV-GGGICGAG

Query:  CGGVGGSACAAGCGNS
        CG VGGSAC +  GN+
Subjt:  CGGVGGSACAAGCGNS

TrEMBL top hitse value%identityAlignment
A0A0A0L0B2 Uncharacterized protein1.0e-2043.29Show/hide
Query:  MFDMQPSIILLIICASLLAAVVVLCCFCIFR-GRKKKESTR-PTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYD------
        + D++PSI+++IIC SL+    +LCCFCI   G +KK++ + PTPS S+       P Q Y D+E GQG R YR D+    E+SI  D +G+        
Subjt:  MFDMQPSIILLIICASLLAAVVVLCCFCIFR-GRKKKESTR-PTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYD------

Query:  ------RSEEHSI----RSSRRSEPSV-----------RQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADY--
              ++ E SI    RSSRR+E S+           + DRQ  R S IKDGGMAILAGAGAA+ATAA  LGLSS +G      G+D   DGD+ D   
Subjt:  ------RSEEHSI----RSSRRSEPSV-----------RQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADY--

Query:  EGGVGGGICGAGCGGVGGSACAAGCGNSSQL
        +G  GGG+ G   GGVG ++     GN SQL
Subjt:  EGGVGGGICGAGCGGVGGSACAAGCGNSSQL

A0A2P5CH37 Uncharacterized protein1.1e-0636.68Show/hide
Query:  MQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTR-PTP------SGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEE
        M+   I L+ C S++AAV++L C C  RG KKK  TR P P      SG+  S   P+P     D+E G+GT+                           
Subjt:  MQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTR-PTP------SGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEE

Query:  HSIRSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADYEGGVGGGICGAGCGGVGGSACAAGCG
                            + SG KDGGM ILAGAGAA+AT AA   +SSG G    G GD  S         GG GGG CG GCGG GG     GCG
Subjt:  HSIRSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADYEGGVGGGICGAGCGGVGGSACAAGCG

A0A5A7VBP6 Uncharacterized protein4.4e-1144.22Show/hide
Query:  GRKKKES-TRPTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYD------------RSEEHSI----RSSRRSE--------
        G KKK++   PTPS S+       P Q Y DVE GQG R YR D+    EQSI PD +G+              ++ E SI    RSSRR+E        
Subjt:  GRKKKES-TRPTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYD------------RSEEHSI----RSSRRSE--------

Query:  ----PSVRQDRQ-GFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADYEGGVGGGICGAGCGGVGGSACAAGCGNSSQL
             S R DRQ   R S IKDGGMAILAGAGAA+ATAA  LGLSS +G      G+D   DG + D     G G  G+G  G GG   +  CGN SQL
Subjt:  ----PSVRQDRQ-GFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADYEGGVGGGICGAGCGGVGGSACAAGCGNSSQL

A0A6J1CLX2 ctenidin-3-like3.0e-2043.52Show/hide
Query:  MQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTP--SGSVSSRPPPWPRQLY--YDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEHSI
        M+P   +LIIC+S++AAVV+LCC CI  GRKKKE+ R TP  S ++ SR  PWPRQ Y  +D+E GQG R                              
Subjt:  MQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTP--SGSVSSRPPPWPRQLY--YDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEHSI

Query:  RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSS-GRGEEY------DGYGDDYSRDGDHADYEGG--------VGGGICGAGCGG
                    +RQG RGSGIKDGGMAILAGAG A+ATAA   GLSS GR   Y       G  D Y  DG   D +GG         GGG CG G GG
Subjt:  RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSS-GRGEEY------DGYGDDYSRDGDHADYEGG--------VGGGICGAGCGG

Query:  VGGSACAAGCGNSSQL
         G      GCG  S+L
Subjt:  VGGSACAAGCGNSSQL

A0A6J1FMR9 glycine-rich RNA-binding protein GRP2A-like4.3e-5162.67Show/hide
Query:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR----PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEE
        MFD++PSII+LIICASLLAAVV+LCC CI RGRK+K+STRPTPSGS+SSR    PPPWPRQ YYDVE GQG RAYR DT  S EQS+  DR GA  RSE+
Subjt:  MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSR----PPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEE

Query:  HSI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHAD----------YEGGV-GGGICGA
        +S      RS++ SEPSV +D++    SG KDGGMAI AGAGAAMA AAA LGLSSG G+EY G GD Y  D    D           +GG  GGG+CGA
Subjt:  HSI-----RSSRRSEPSVRQDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHAD----------YEGGV-GGGICGA

Query:  GCGGVGGSACAAGCGNS
        GCG VGGSAC +  GN+
Subjt:  GCGGVGGSACAAGCGNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATATGCAACCTTCCATCATCCTTCTCATAATTTGCGCTTCTTTACTAGCTGCTGTTGTGGTTTTATGTTGTTTTTGTATATTTCGAGGCCGAAAAAAGAAAGA
ATCAACACGGCCTACTCCTAGTGGTTCTGTTAGTTCAAGGCCTCCGCCTTGGCCGCGACAATTGTACTATGATGTCGAGTTGGGACAAGGCACTCGAGCATACAGACTTG
ACACTCAAACAAGCGAAGAACAAAGCATTCGACCAGATAGACAAGGTGCTTATGATAGAAGCGAAGAACACAGTATTCGAAGTAGTCGAAGAAGCGAACCCAGCGTTCGA
CAAGACAGACAAGGCTTTCGAGGAAGCGGAATCAAGGACGGTGGGATGGCCATATTGGCTGGAGCTGGAGCCGCTATGGCTACTGCAGCTGCAACTCTTGGTTTAAGTAG
TGGTCGAGGAGAAGAATATGATGGCTATGGTGATGACTATAGTCGAGATGGTGATCATGCCGACTACGAGGGCGGAGTTGGTGGTGGCATATGCGGTGCTGGCTGTGGAG
GGGTCGGTGGCAGCGCCTGTGCTGCTGGCTGTGGCAATAGCTCACAACTCTGA
mRNA sequenceShow/hide mRNA sequence
GCTTCAAACATTAAAGCAAGTAAACTTGGAAGGTCTTTTTTTGGCTTATAATGTTTGATATGCAACCTTCCATCATCCTTCTCATAATTTGCGCTTCTTTACTAGCTGCT
GTTGTGGTTTTATGTTGTTTTTGTATATTTCGAGGCCGAAAAAAGAAAGAATCAACACGGCCTACTCCTAGTGGTTCTGTTAGTTCAAGGCCTCCGCCTTGGCCGCGACA
ATTGTACTATGATGTCGAGTTGGGACAAGGCACTCGAGCATACAGACTTGACACTCAAACAAGCGAAGAACAAAGCATTCGACCAGATAGACAAGGTGCTTATGATAGAA
GCGAAGAACACAGTATTCGAAGTAGTCGAAGAAGCGAACCCAGCGTTCGACAAGACAGACAAGGCTTTCGAGGAAGCGGAATCAAGGACGGTGGGATGGCCATATTGGCT
GGAGCTGGAGCCGCTATGGCTACTGCAGCTGCAACTCTTGGTTTAAGTAGTGGTCGAGGAGAAGAATATGATGGCTATGGTGATGACTATAGTCGAGATGGTGATCATGC
CGACTACGAGGGCGGAGTTGGTGGTGGCATATGCGGTGCTGGCTGTGGAGGGGTCGGTGGCAGCGCCTGTGCTGCTGGCTGTGGCAATAGCTCACAACTCTGAGGATCAA
TGCCACAAGCTTTTTCAGAGTCCTTTGTTTGCTTACTTCTTGTTCCAAT
Protein sequenceShow/hide protein sequence
MFDMQPSIILLIICASLLAAVVVLCCFCIFRGRKKKESTRPTPSGSVSSRPPPWPRQLYYDVELGQGTRAYRLDTQTSEEQSIRPDRQGAYDRSEEHSIRSSRRSEPSVR
QDRQGFRGSGIKDGGMAILAGAGAAMATAAATLGLSSGRGEEYDGYGDDYSRDGDHADYEGGVGGGICGAGCGGVGGSACAAGCGNSSQL