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Sed0003200 (gene) of Chayote v1 genome

Gene IDSed0003200
OrganismSechium edule (Chayote v1)
DescriptionProgrammed cell death protein 4-like
Genome locationLG12:29161401..29162047
RNA-Seq ExpressionSed0003200
SyntenySed0003200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY30624.1 Uncharacterized protein TCM_037765 [Theobroma cacao]6.2e-1564.86Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
        MK   KSSK + K DVRKDR+S TG++GSPKKGGHGGK+TW G G  PAEI    E +D KDPNFEDP+E V N
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
KAE7998638.1 hypothetical protein FH972_003164 [Carpinus fangiana]1.4e-1470Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEE
        MKK  KS K   K + RKDR+SATG+NGSPKKGGHGGKFTW G G   AEI    EA+DAKDPNFEDPEE
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEE
KAG6588005.1 hypothetical protein SDJN03_16570, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2079.45Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVA
        MKKPEKS KPS K DVRKDR+SATG++GSPKKGGHGGKFTWAG G  PAEI    E MD KDPNFEDPEEAVA
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVA
TYK10141.1 programmed cell death protein 4-like [Cucumis melo var. makuwa]1.6e-1875.34Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVA
        MKK EKSSKP+ K +VRKDR+SATG+NGSPKKGGHGGKFTW+G G  PAEI    E MD KDPNFED EEAVA
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVA
XP_022730195.1 programmed cell death protein 4-like [Durio zibethinus]2.1e-1566.22Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
        MK   KS+K + K DVRKDR+S TG++GSPKKGGHGGKFTWAG G  PAEI    E +D KDPNFEDP+E V N
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
TrEMBL top hitse value%identityAlignment
A0A061GU30 Uncharacterized protein3.0e-1564.86Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
        MK   KSSK + K DVRKDR+S TG++GSPKKGGHGGK+TW G G  PAEI    E +D KDPNFEDP+E V N
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
A0A0A0LWP4 Uncharacterized protein2.9e-1876.06Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEA
        MKK EKSSKPS K +VRKDR+SATG+NGSPKKGGHGGKFTW+G G  PAEI    E MD KDPNFED EEA
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEA
A0A5D3CE82 Programmed cell death protein 4-like7.6e-1975.34Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVA
        MKK EKSSKP+ K +VRKDR+SATG+NGSPKKGGHGGKFTW+G G  PAEI    E MD KDPNFED EEAVA
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVA
A0A6P5XPU9 programmed cell death protein 4-like1.0e-1566.22Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
        MK   KS+K + K DVRKDR+S TG++GSPKKGGHGGKFTWAG G  PAEI    E +D KDPNFEDP+E V N
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAVAN
A0A803NU54 Uncharacterized protein3.0e-1566.67Show/hide
Query:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAV
        MK   K SK + K +V+KDR+S TGINGSPKKGGHGGKFTWAG G  P+E+    E MD KDPNFEDPEE V
Subjt:  MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEI----EAMDAKDPNFEDPEEAV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCCAGAGAAAAGCTCCAAGCCAAGCGCCAAATGCGATGTGCGGAAGGATCGGCAATCGGCGACGGGGATCAACGGATCGCCGAAGAAAGGAGGCCACGGCGG
CAAGTTCACCTGGGCCGGAAAAGGTGACTTTCCGGCCGAGATCGAAGCTATGGACGCGAAGGACCCTAACTTCGAAGATCCGGAAGAGGCGGTCGCGAATTAG
mRNA sequenceShow/hide mRNA sequence
GTAAACCCTGGCGTGCTTATCCGCTCGAAATCATCAAATCAAGAAATGACACTCCAACACACAGATCGCCTCTGTATAAAATCGAAACTTCGTTCAGTCCAACACAGAGA
CGAACCAGCGATTTAAGATGAAGAAGCCAGAGAAAAGCTCCAAGCCAAGCGCCAAATGCGATGTGCGGAAGGATCGGCAATCGGCGACGGGGATCAACGGATCGCCGAAG
AAAGGAGGCCACGGCGGCAAGTTCACCTGGGCCGGAAAAGGTGACTTTCCGGCCGAGATCGAAGCTATGGACGCGAAGGACCCTAACTTCGAAGATCCGGAAGAGGCGGT
CGCGAATTAGATCGTTTCGAGTTTGAGATCTGTAAATAGTCTCTTCATGGACGCTAATCTGTGGTTTTTCGATTTCAATAAAATCGCGCTTCGTTTGTATAGATCTGTTG
TTATTGGCTGATTTTCAGTGACGTTTCTTAGTTGAAGAACAGGGGGGAAATGTATGTGAAACTTCACGATCCCGTGCTCTGTATCAATCCAACCAAACTCTCGATTGAGT
ATCGTGATATCTACTCGATAACCATTTCGATTTTTGTTTTTTATTTTATACTCAAAATTTGTTTTTGAAAGATTAGCATTCACATCATAGAATATAG
Protein sequenceShow/hide protein sequence
MKKPEKSSKPSAKCDVRKDRQSATGINGSPKKGGHGGKFTWAGKGDFPAEIEAMDAKDPNFEDPEEAVAN