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Sed0003203 (gene) of Chayote v1 genome

Gene IDSed0003203
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR21-like
Genome locationLG01:1851404..1852028
RNA-Seq ExpressionSed0003203
SyntenySed0003203
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571049.1 Auxin-responsive protein SAUR20, partial [Cucurbita argyrosperma subsp. sororia]1.4e-4493.75Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT
        MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT

KGN61882.1 hypothetical protein Csa_006681 [Cucumis sativus]3.6e-4595.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        MGIRLPSLLLNAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

XP_008457637.1 PREDICTED: auxin-responsive protein SAUR21-like [Cucumis melo]1.0e-4494.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

XP_022944352.1 auxin-responsive protein SAUR21-like [Cucurbita moschata]1.4e-4493.75Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT
        MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT

XP_022986729.1 auxin-responsive protein SAUR21-like [Cucurbita maxima]1.0e-4494.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT
        MGIRLPSLLLNAKQVVKM T  SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT

TrEMBL top hitse value%identityAlignment
A0A0A0LM71 Uncharacterized protein1.7e-4595.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        MGIRLPSLLLNAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

A0A1S3C787 auxin-responsive protein SAUR21-like5.0e-4594.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

A0A5D3BMR1 Auxin-responsive protein SAUR21-like5.0e-4594.74Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        MGIRLPSLL NAKQV KMHT SSRNQCGVPKGHIAVYVGDIERKRFVVP+SYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRL+
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

A0A6J1FVH4 auxin-responsive protein SAUR21-like6.6e-4593.75Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT
        MGIRLPSLLLNAKQ+VKM T SSRNQCGVPKGHIAVYVGD ERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT

A0A6J1JGW3 auxin-responsive protein SAUR21-like5.0e-4594.79Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT
        MGIRLPSLLLNAKQVVKM T  SRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLK+AEEEFGFKHPTGGLTIPCREDVFINLTSRL+T
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT

SwissProt top hitse value%identityAlignment
Q9FJF7 Auxin-responsive protein SAUR221.0e-2357.47Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +E+EFGF HP GGLTIPC ED FIN+TSRL+
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

Q9FJF9 Auxin-responsive protein SAUR218.0e-2458.62Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   T S+      PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL+
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

Q9FJG0 Auxin-responsive protein SAUR201.6e-2459.77Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   TT++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR +
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

Q9FJG1 Auxin-responsive protein SAUR191.8e-2357.47Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYL+ PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL+
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

Q9FK62 Auxin-responsive protein SAUR246.2e-2458.62Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL+
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

Arabidopsis top hitse value%identityAlignment
AT2G21210.1 SAUR-like auxin-responsive protein family2.7e-2756.7Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT
        M IR+  +L ++KQ++K  + SS N   +PKGH+AVYVG+ ++++RFVVP++YL+HP F  LL+ AEEEFGF HP GGLTIPC E +FI+L SRL T
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGD-IERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKT

AT4G34810.1 SAUR-like auxin-responsive protein family6.7e-2654.29Show/hide
Query:  MGIRLPSLLLNAKQVVKMHTTSSRNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-
        MG+   ++    KQ++K+++ ++RN+        VPKGH+AVYVG   ++E+KRFVVPIS+LNHPSF   L  AEEEFGF HP GGLTIPCRE+VF++L 
Subjt:  MGIRLPSLLLNAKQVVKMHTTSSRNQCG------VPKGHIAVYVG---DIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINL-

Query:  TSRLK
         SRL+
Subjt:  TSRLK

AT4G38840.1 SAUR-like auxin-responsive protein family6.1e-2755.67Show/hide
Query:  MGIRLPSLLLNAKQVVK----MHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR
        M IR+P +L ++KQ+++    + ++SS +   VPKG++AVYVG+   KRFVVP+SYL+ PSF  LL+ AEEEFGF HP GGLTIPC E++FI+L SR
Subjt:  MGIRLPSLLLNAKQVVK----MHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSR

AT5G18020.1 SAUR-like auxin-responsive protein family1.1e-2559.77Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   TT++      PKG +AVYVG+ ++KR++VPISYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSR +
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK

AT5G18080.1 SAUR-like auxin-responsive protein family4.4e-2558.62Show/hide
Query:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK
        LL AK+++   T +       PKG +AVYVG+ ++KR++VP+SYLN PSF ALL  +EEEFGF HP GGLTIPC ED FIN+TSRL+
Subjt:  LLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATCAGATTACCTTCACTTCTCCTGAATGCCAAGCAAGTTGTCAAAATGCATACCACTTCTTCGAGAAACCAGTGCGGTGTTCCCAAAGGCCATATTGCAGTCTA
TGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCAATATCATACTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAGCATC
CAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTCTTCATCAACCTCACATCCAGGCTGAAAACTTTCTGA
mRNA sequenceShow/hide mRNA sequence
AAGTAGGCCTTCTCATACACCAACTTGATACTGTTTGCCTTCATCAATCTCAATCCATAAATACAGACCAAATTAACTTCAATCCCCAACTCAAATTTCAAACACATCCT
CATTTGAGCACTAAACTTCCAAACTTCTAGTTCTGTACTAAGCAGAAAACCTTTCGAAAGTCGACATGGGAATCAGATTACCTTCACTTCTCCTGAATGCCAAGCAAGTT
GTCAAAATGCATACCACTTCTTCGAGAAACCAGTGCGGTGTTCCCAAAGGCCATATTGCAGTCTATGTGGGAGATATTGAAAGAAAGCGATTCGTAGTTCCAATATCATA
CTTGAACCATCCTTCTTTTTCAGCTTTGCTCAAAAGTGCAGAAGAAGAGTTTGGATTTAAGCATCCAACTGGAGGCTTGACAATTCCTTGCAGAGAAGATGTCTTCATCA
ACCTCACATCCAGGCTGAAAACTTTCTGAAAGAGAGAAGAACAAAAATCCTCCACACAGTTTTGCTAGTTAGGAGTAGAAATCAATGTATAGTTAGTTTCAACATCTTAG
TGATCAAGCAGCTGATAGGATCATTGCCTATCTGCCTGAACATCATTTACACAACTTACAATTACAGAGCTGTAA
Protein sequenceShow/hide protein sequence
MGIRLPSLLLNAKQVVKMHTTSSRNQCGVPKGHIAVYVGDIERKRFVVPISYLNHPSFSALLKSAEEEFGFKHPTGGLTIPCREDVFINLTSRLKTF