CuGenDBv2

Gene ID	Sed0003209
Organism	Sechium edule (Chayote v1)
Description	Unknown protein
Genome location	LG13:19085970..19086386
RNA-Seq Expression	Sed0003209
Synteny	Sed0003209
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6583459.1 hypothetical protein SDJN03_19391, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-53

81.75

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MTQMLTF+FCLSSF  LS+ +AEG  RAPHGLVY +P+AFSPMAYDFFHPSTQ P+AKDPCG+SKCSPLPLAAQVQSTPA+ESKYSTT QKG HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKP
        I+GIVFGITFAV LAMGVYY+LRT QANA+RAMSA+P
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKP

KAG7019217.1 hypothetical protein SDJN02_18175, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.7e-54

82.48

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MTQMLTF+FCLSSF  LS+ +AEG  RAPHGLVY +P+AFSPMAYDFFHPSTQ P+AKDPCG+SKCSPLPLAAQVQSTPA+ESKYSTT QKG HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKP
        I+GIVFGITFAVFLAMGVYY+LRT QANA+RAMSA+P
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKP

XP_008457527.1 PREDICTED: uncharacterized protein LOC103497198 [Cucumis melo]

4.3e-52

81.48

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MT+MLTF+FCLSSF  LSV RA+G  RAPHGLVY +P+AFSPMAYDFFHPSTQNP+ KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q  +HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA
        I+GIVFGITFAVFLAMGVYY+LRT QANA+RAMSA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA

XP_011657962.2 uncharacterized protein LOC105435923 [Cucumis sativus]

6.2e-51

79.26

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MT+MLTF+FCL+SF  LS+ +A+G  RAPHGLVY +P+AFSPMAYDFFHPSTQNPS KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q   HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA
        I+GIVFGITFAVFL MGVYY+LRT QANA+RAMSA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA

XP_022158643.1 uncharacterized protein LOC111025099 [Momordica charantia]

8.1e-51

77.7

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYST-TQKGEHRVGTGR
        MTQMLTF+FCLSS   LSV RAEG  RAPHGLVY +P+AFSPMAYDFFHPS QN +AKDPC +SKCSPLPLAAQVQSTPAQ+SKYST  QKGEH +G G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYST-TQKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKPGA
        ++GIV GI FAVFLAMGVYY+LRT QANA+RAMS +PGA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKPGA

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LV85 Uncharacterized protein

1.0e-51

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MT+MLTF+FCL+SF  LS+ RA+G  RAPHGLVY +P+AFSPMAYDFFHPSTQNPS KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q   HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA
        I+GIVFGITFAVFL MGVYY+LRT QANA+RAMSA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA

A0A1S3C6E2 uncharacterized protein LOC103497198

2.1e-52

81.48

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MT+MLTF+FCLSSF  LSV RA+G  RAPHGLVY +P+AFSPMAYDFFHPSTQNP+ KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q  +HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA
        I+GIVFGITFAVFLAMGVYY+LRT QANA+RAMSA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA

A0A5A7SXJ1 Uncharacterized protein

2.1e-52

81.48

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR
        MT+MLTF+FCLSSF  LSV RA+G  RAPHGLVY +P+AFSPMAYDFFHPSTQNP+ KDPCG SKCSPLPLAAQVQSTPA+ESKYSTT Q  +HRVG G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTT-QKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA
        I+GIVFGITFAVFLAMGVYY+LRT QANA+RAMSA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSA

A0A6J1DWP3 uncharacterized protein LOC111025099

3.9e-51

77.7

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYST-TQKGEHRVGTGR
        MTQMLTF+FCLSS   LSV RAEG  RAPHGLVY +P+AFSPMAYDFFHPS QN +AKDPC +SKCSPLPLAAQVQSTPAQ+SKYST  QKGEH +G G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYST-TQKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKPGA
        ++GIV GI FAVFLAMGVYY+LRT QANA+RAMS +PGA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKPGA

A0A6J1GD80 uncharacterized protein LOC111452884

3.7e-49

77.7

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYS-TTQKGEHRVGTGR
        M Q LTF+F LSSF+ LS+VRAEG  RAPHGLVY NP+AFSPMAYDFFHP T++P+A+DPCG+SKCSPLPLAAQ+QS PAQESKYS TTQKGE   G G 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYS-TTQKGEHRVGTGR

Query:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKPGA
        I+GIVFGITFAVFLAMGVYY+LRT  AN +RAMSAKPGA
Subjt:  IMGIVFGITFAVFLAMGVYYILRTCQANADRAMSAKPGA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G28410.1 unknown protein

6.2e-17

43.59

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Query:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAK-DPCGSSKCSPLPLAAQVQ--STPAQESKYSTTQKGEHR-VG
        MT     +F  SS  + +   A+  DRAPHGL Y  P+AFSP A+DFFH   +NP    +PC  S CSPLP+AA+VQ  S  AQES   +   G    + 
Subjt:  MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAK-DPCGSSKCSPLPLAAQVQ--STPAQESKYSTTQKGEHR-VG

Query:  TGRIMGIVFGITFAVFL
           ++GI+FG+ FAV +
Subjt:  TGRIMGIVFGITFAVFL

AT5G60650.1 unknown protein

2.2e-14

33.8

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Query:  MTQMLTFMF-CLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSS----KCSPLPLAAQVQSTPAQESK-----YSTTQK
        +T  L F F CLS    +S+  +    R  HG  Y NP AFSP AYDFFHP +      +P  SS      SP P    +    +Q SK     ++T++ 
Subjt:  MTQMLTFMF-CLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSS----KCSPLPLAAQVQSTPAQESK-----YSTTQK

Query:  GEHRVGTGRIMGIVFGITFAVFLAMGVYYILRTCQANADRAM
             G G  +G+V G++F  FL++G+Y++++  +AN  R +
Subjt:  GEHRVGTGRIMGIVFGITFAVFLAMGVYYILRTCQANADRAM

Sequences

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CDS sequence

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ATGACCCAAATGCTCACTTTCATGTTCTGTCTCTCTTCCTTCGCAATTCTTTCTGTCGTCCGAGCTGAAGGCACGGACAGAGCTCCTCATGGTTTGGTATACGCGAACCC
GATGGCCTTCTCCCCAATGGCATACGATTTCTTTCATCCAAGCACCCAAAATCCCAGTGCCAAGGACCCCTGTGGGTCATCCAAATGCTCCCCCTTGCCCCTTGCAGCTC
AAGTGCAATCTACTCCTGCACAAGAAAGCAAATACTCCACAACCCAGAAAGGCGAGCACCGCGTCGGGACGGGTAGGATTATGGGAATTGTGTTTGGCATCACATTTGCT
GTGTTTTTGGCAATGGGGGTATACTATATACTACGTACCTGTCAAGCCAATGCAGACCGAGCCATGTCTGCAAAACCTGGTGCCTGA

mRNA sequence

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Protein sequence

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MTQMLTFMFCLSSFAILSVVRAEGTDRAPHGLVYANPMAFSPMAYDFFHPSTQNPSAKDPCGSSKCSPLPLAAQVQSTPAQESKYSTTQKGEHRVGTGRIMGIVFGITFA
VFLAMGVYYILRTCQANADRAMSAKPGA

Sed0003209 (gene) of Chayote v1 genome