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Sed0003235 (gene) of Chayote v1 genome

Gene IDSed0003235
OrganismSechium edule (Chayote v1)
DescriptionXyloglucan endotransglucosylase/hydrolase protein 9
Genome locationLG01:5138652..5139132
RNA-Seq ExpressionSed0003235
SyntenySed0003235
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6572323.1 hypothetical protein SDJN03_29051, partial [Cucurbita argyrosperma subsp. sororia]3.5e-1252.04Show/hide
Query:  MVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQAAAG----PEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK
        M ++ LLCLILA  LL Q  A++A       T +    A    E +N    G    PEIRRLGKHH   S+AGGGV+IGGL TA FA VFCYIRVT K
Subjt:  MVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQAAAG----PEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK

KAG7034949.1 hypothetical protein SDJN02_01742 [Cucurbita argyrosperma subsp. argyrosperma]8.0e-2572.12Show/hide
Query:  TNISMAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEV--ENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIR
        T ++MA+VR GLLCL+L G  L QLTAAS A AP VATA  F   EIGKEV  ENQ   AAGPEIRRLGKHH  TS+AGGGVL+GGLATA FAVVFCYIR
Subjt:  TNISMAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEV--ENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIR

Query:  VTTK
        VT K
Subjt:  VTTK

KGN46704.1 hypothetical protein Csa_020980 [Cucumis sativus]2.7e-2063.11Show/hide
Query:  AMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQ---AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTKPN
        A+VRL L+ LILAG    QLTAA+   AP V TA  F  ++IGKE   Q    A GP IRRLGKHHF TS+AGG VLIG LATA FA+VFCYIRVT KPN
Subjt:  AMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQ---AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTKPN

Query:  QTN
          N
Subjt:  QTN

XP_022947872.1 uncharacterized protein LOC111451632 [Cucurbita moschata]6.8e-2474Show/hide
Query:  MAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEV--ENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK
        MA+VR GLLCL+L G  L QLTAAS A AP VATA  F   EIGKEV  ENQ   AAGPEIRRLGKHH  TS+AGGGVL+GGLATA FAVVFCYIRVT K
Subjt:  MAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEV--ENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK

XP_023532519.1 uncharacterized protein LOC111794654 [Cucurbita pepo subsp. pepo]9.5e-2669.16Show/hide
Query:  FTNISMAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIG--KEVENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYI
        +++ +MA+VR GLLCL+L G  L QLTAAS A AP VATA  F  AEIG   E+ENQ   AAGPEIRRLGKHH  TS+AGGGVL+GGLATA FAVVFCYI
Subjt:  FTNISMAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIG--KEVENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYI

Query:  RVTTKPN
        RVT KP+
Subjt:  RVTTKPN

TrEMBL top hitse value%identityAlignment
A0A067KB75 Uncharacterized protein8.4e-1254.08Show/hide
Query:  MAMVRLGLLCLILAGNLLFQLTA-ASAAYAPQVATATRFHEAEIGKEVENQAAAGPEIRRLGKHH-FQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK
        MA +RL + CLILAG L+ Q TA  S   +P VA      +  +    E + A  PEIRRLGKHH    S+AGGGV+IGGL TA FA VFCYIRVT K
Subjt:  MAMVRLGLLCLILAGNLLFQLTA-ASAAYAPQVATATRFHEAEIGKEVENQAAAGPEIRRLGKHH-FQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK

A0A0A0K3N0 Uncharacterized protein3.2e-1149.44Show/hide
Query:  LLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQAAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK
        L CLI+    L Q    S A   ++  +     +E G    ++ A  PEIRRLGKHH   S+AGGGV+IGGL TA FA VFCYIRVT K
Subjt:  LLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQAAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK

A0A0A0KCY0 Uncharacterized protein1.3e-2063.11Show/hide
Query:  AMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQ---AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTKPN
        A+VRL L+ LILAG    QLTAA+   AP V TA  F  ++IGKE   Q    A GP IRRLGKHHF TS+AGG VLIG LATA FA+VFCYIRVT KPN
Subjt:  AMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQ---AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTKPN

Query:  QTN
          N
Subjt:  QTN

A0A6J1G7L7 uncharacterized protein LOC1114516323.3e-2474Show/hide
Query:  MAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEV--ENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK
        MA+VR GLLCL+L G  L QLTAAS A AP VATA  F   EIGKEV  ENQ   AAGPEIRRLGKHH  TS+AGGGVL+GGLATA FAVVFCYIRVT K
Subjt:  MAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEV--ENQ--AAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK

W9R8T9 Uncharacterized protein2.4e-1151.35Show/hide
Query:  MVRLGLLCLILAGNLLFQLTAASAAYAP--QVATATR----------FHEAEIGKEV---ENQAAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVV
        M R+ LL LIL G L+ Q  AA +   P  QV +  R            E   GKE    EN+A A P IRRLGKHH   S+AGGGV+IGGL TA FA V
Subjt:  MVRLGLLCLILAGNLLFQLTAASAAYAP--QVATATR----------FHEAEIGKEV---ENQAAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVV

Query:  FCYIRVTTKPN
        FCYIRVT K N
Subjt:  FCYIRVTTKPN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09280.1 unknown protein8.0e-0741.3Show/hide
Query:  LLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVE-NQAAAGPEIRRLGKHH--FQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK
        +LC +L    +F + AAS+   P        HE   G+E E  + +   E  R G HH   + S+AGGGV++GGLAT    VVFCYIR T K
Subjt:  LLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVE-NQAAAGPEIRRLGKHH--FQTSIAGGGVLIGGLATAAFAVVFCYIRVTTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAAGTTAGTTTCACAAATATTAGTATGGCTATGGTCCGACTTGGTTTGCTGTGTCTAATTCTTGCTGGAAATTTGTTGTTTCAACTCACGGCCGCGAGTGCGGC
CTACGCGCCGCAGGTTGCCACTGCGACGCGGTTTCATGAGGCTGAAATTGGAAAGGAAGTGGAGAATCAGGCGGCGGCCGGTCCTGAAATCAGACGGCTGGGAAAGCATC
ATTTTCAAACCTCCATCGCCGGCGGCGGGGTGCTCATCGGCGGCCTTGCTACGGCTGCTTTTGCTGTTGTGTTTTGTTATATAAGAGTCACCACAAAACCAAACCAAACT
AATTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAAAAAAATCAAATTCAGATACATATTAGAGGGCATTTCATGTTTGTATGATAAAAGTTAGTTTCACAAATATTAGTATGGCTATGGTCCGACTTGGTTTG
CTGTGTCTAATTCTTGCTGGAAATTTGTTGTTTCAACTCACGGCCGCGAGTGCGGCCTACGCGCCGCAGGTTGCCACTGCGACGCGGTTTCATGAGGCTGAAATTGGAAA
GGAAGTGGAGAATCAGGCGGCGGCCGGTCCTGAAATCAGACGGCTGGGAAAGCATCATTTTCAAACCTCCATCGCCGGCGGCGGGGTGCTCATCGGCGGCCTTGCTACGG
CTGCTTTTGCTGTTGTGTTTTGTTATATAAGAGTCACCACAAAACCAAACCAAACTAATTAACCCTTTTTTTCTCCTTTTAAACAAACTTTATGCACTCTTTTTGTTTTT
CTCCCACGTTTTTGGAATATTGATTCTTAGTTGTAAAAGCC
Protein sequenceShow/hide protein sequence
MIKVSFTNISMAMVRLGLLCLILAGNLLFQLTAASAAYAPQVATATRFHEAEIGKEVENQAAAGPEIRRLGKHHFQTSIAGGGVLIGGLATAAFAVVFCYIRVTTKPNQT
N