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Sed0003243 (gene) of Chayote v1 genome

Gene IDSed0003243
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG03:10058990..10060049
RNA-Seq ExpressionSed0003243
SyntenySed0003243
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598839.1 Pleiotropic drug resistance protein 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4567.53Show/hide
Query:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER
        MAM+ TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G A+ALQMVGE GG+EMG      +V+FVDSRKWSEER
Subjt:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +S STRCFS+
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
XP_022929729.1 uncharacterized protein LOC111436227 [Cucurbita moschata]5.1e-4668.18Show/hide
Query:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER
        MAM+ TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G AIALQMVGE GG+EMG      +V+FVDSRKWSEER
Subjt:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +S STRCFS+
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
XP_022997474.1 uncharacterized protein LOC111492380 [Cucurbita maxima]2.1e-4768.63Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERM
        MAM+TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G A+ALQMVGE GG+EMG      +V+FVDSRKWSEERM
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERM

Query:  CPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        CPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +S STRCFSM
Subjt:  CPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
XP_023521869.1 uncharacterized protein LOC111785720 [Cucurbita pepo subsp. pepo]1.9e-4567.53Show/hide
Query:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER
        MAM+ TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G A+ALQMVGE GG+EMG      +V+FVDSRKWSEER
Subjt:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +  STRCFSM
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
XP_023547232.1 uncharacterized protein LOC111806106 [Cucurbita pepo subsp. pepo]8.7e-4668.18Show/hide
Query:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER
        MAM+ TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G A+ALQMVGE GG+EMG      +V+FVDSRKWSEER
Subjt:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +S STRCFSM
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
TrEMBL top hitse value%identityAlignment
A0A0A0LLU6 Uncharacterized protein1.3e-3961.29Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERM
        M MATTCCLNNLNPPP L      +S  STN  L+          +G    W+KRCVLG AG   AL M GE  G+EM       N++FVDSRKWSEERM
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERM

Query:  CPQWRLNSLETVVPENLPRPAARRRWEPAALPHS--APSLRISHITSPSTRCFSM
        CPQWRLNSLET+VPENLPRPAARRRW+PAALP +  AP LR ++ TS STRCFSM
Subjt:  CPQWRLNSLETVVPENLPRPAARRRWEPAALPHS--APSLRISHITSPSTRCFSM
A0A1S3BBI5 uncharacterized protein LOC1034882672.6e-4064.1Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVD-SRKWSEER
        MAMATTCC+NNLNPPP L      +S  STN      + L   N  G +  W+KRCVLGVAG   AL M GE GG+EMGN N+     FVD SRKWSEER
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVD-SRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPS--LRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRW+PAALPH+AP+  LR ++  S STRCFSM
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPS--LRISHITSPSTRCFSM
A0A5A7VGF0 Uncharacterized protein3.4e-4064.1Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVD-SRKWSEER
        MAMATTCC+NNLNPPP L      +S  STN      + L   N  G +  W+KRCVLGVAG   AL M GE GG+EMGN N+     FVD SRKWSEER
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVD-SRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPS--LRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRW+PAALPH+AP+  LR ++  S STRCFSM
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPS--LRISHITSPSTRCFSM
A0A6J1EPL8 uncharacterized protein LOC1114362272.5e-4668.18Show/hide
Query:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER
        MAM+ TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G AIALQMVGE GG+EMG      +V+FVDSRKWSEER
Subjt:  MAMA-TTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEER

Query:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        MCPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +S STRCFS+
Subjt:  MCPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
A0A6J1KBE7 uncharacterized protein LOC1114923801.0e-4768.63Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERM
        MAM+TTCCLNNLNPPP LLP+   S+  +TN        L  RN +G++  WQKRCVLGV G A+ALQMVGE GG+EMG      +V+FVDSRKWSEERM
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERM

Query:  CPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
        CPQWRLNSLET+VPENLPRPAARRRWEPAALP +AP LR  H +S STRCFSM
Subjt:  CPQWRLNSLETVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G25625.1 unknown protein1.5e-1133.75Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRC--VLGVAG----AAIALQMVGECGGLEMGNNNNNNNVHFVDSRK
        MA   +CCLN        LP    +S  S    L   S +S R  + +    + +C  VLGVA       I +  V       + +         V  R+
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRC--VLGVAG----AAIALQMVGECGGLEMGNNNNNNNVHFVDSRK

Query:  WSEERMCPQWRLNSLETVVPENLPRPAARRRWEPAALPH-SAPSLRISHITSPSTRCFSM
        WS++R CP W  NSLET+VPENLPRP+A RR E A L    AP + +         CFS+
Subjt:  WSEERMCPQWRLNSLETVVPENLPRPAARRRWEPAALPH-SAPSLRISHITSPSTRCFSM
AT2G25625.2 unknown protein1.3e-1033.96Show/hide
Query:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQK-RCVLGVAG----AAIALQMVGECGGLEMGNNNNNNNVHFVDSRKW
        MA   +CCLN        LP    +S  S    L   S +S R ++  +    K   VLGVA       I +  V       + +         V  R+W
Subjt:  MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQK-RCVLGVAG----AAIALQMVGECGGLEMGNNNNNNNVHFVDSRKW

Query:  SEERMCPQWRLNSLETVVPENLPRPAARRRWEPAALPH-SAPSLRISHITSPSTRCFSM
        S++R CP W  NSLET+VPENLPRP+A RR E A L    AP + +         CFS+
Subjt:  SEERMCPQWRLNSLETVVPENLPRPAARRRWEPAALPH-SAPSLRISHITSPSTRCFSM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGCCACCACATGTTGCCTCAATAACCTCAATCCGCCGCCGCCGCTGTTGCCGGAAAAGTCCCATTCATCCCCCTTATCTACCAACTACAATTTGGTTATTTG
TTCACATTTATCCCAAAGGAATGATGATGGAAAAAAAGGAAGTTGGCAAAAACGGTGCGTTTTGGGGGTGGCCGGAGCGGCAATAGCCCTGCAAATGGTCGGAGAATGCG
GCGGTTTGGAAATGGGAAATAATAATAATAATAATAATGTTCATTTTGTCGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCGCAATGGCGGCTCAATTCCCTCGAA
ACCGTCGTGCCGGAGAATCTTCCACGGCCGGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCACTCTGCCCCTTCACTTCGAATCTCACATATAACTTCCCCTTC
TACTCGTTGCTTCTCTATGTAA
mRNA sequenceShow/hide mRNA sequence
GAACAAAATGGCTATGGCCACCACATGTTGCCTCAATAACCTCAATCCGCCGCCGCCGCTGTTGCCGGAAAAGTCCCATTCATCCCCCTTATCTACCAACTACAATTTGG
TTATTTGTTCACATTTATCCCAAAGGAATGATGATGGAAAAAAAGGAAGTTGGCAAAAACGGTGCGTTTTGGGGGTGGCCGGAGCGGCAATAGCCCTGCAAATGGTCGGA
GAATGCGGCGGTTTGGAAATGGGAAATAATAATAATAATAATAATGTTCATTTTGTCGATTCCAGAAAATGGAGCGAAGAAAGAATGTGCCCGCAATGGCGGCTCAATTC
CCTCGAAACCGTCGTGCCGGAGAATCTTCCACGGCCGGCCGCCCGCCGGAGATGGGAGCCCGCCGCCCTTCCTCACTCTGCCCCTTCACTTCGAATCTCACATATAACTT
CCCCTTCTACTCGTTGCTTCTCTATGTAATAACCATTACCCAATTCAATTTACCAATTGTTTGTTTCATGCCATTTTACATTATAGCATTTCTAGTAAAAACAATATGCA
ATAATAATTATAATTTAGCTTTA
Protein sequenceShow/hide protein sequence
MAMATTCCLNNLNPPPPLLPEKSHSSPLSTNYNLVICSHLSQRNDDGKKGSWQKRCVLGVAGAAIALQMVGECGGLEMGNNNNNNNVHFVDSRKWSEERMCPQWRLNSLE
TVVPENLPRPAARRRWEPAALPHSAPSLRISHITSPSTRCFSM