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Sed0003245 (gene) of Chayote v1 genome

Gene IDSed0003245
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG10:1816557..1818167
RNA-Seq ExpressionSed0003245
SyntenySed0003245
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008439852.1 PREDICTED: uncharacterized protein LOC103484518 [Cucumis melo]1.2e-7395.89Show/hide
Query:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS
        MGSSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHG + ATKLMGSTPHDQLLI+TSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVS
Subjt:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS

Query:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
XP_011658212.1 uncharacterized protein LOC101204514 [Cucumis sativus]1.1e-7497.26Show/hide
Query:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS
        MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG +IATKLMGSTPHDQLLI+TSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVS
Subjt:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS

Query:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
XP_022926441.1 uncharacterized protein LOC111433593 [Cucurbita moschata]1.9e-7498.61Show/hide
Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
XP_023003187.1 uncharacterized protein LOC111496876 [Cucurbita maxima]2.1e-7397.22Show/hide
Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGC VLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MWRFYFERRVEDL+WDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
XP_038881843.1 uncharacterized protein LOC120073208 [Benincasa hispida]1.4e-7497.26Show/hide
Query:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS
        MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG D ATKLMGSTPHDQLLI+TSDSFSGLLLFAIGFLLFMVSFV+DREFQGFFAKGCTVLHVS
Subjt:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS

Query:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
TrEMBL top hitse value%identityAlignment
A0A0A0KHM7 Uncharacterized protein5.4e-7597.26Show/hide
Query:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS
        MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG +IATKLMGSTPHDQLLI+TSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVS
Subjt:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS

Query:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
A0A1S3AZP8 uncharacterized protein LOC1034845185.9e-7495.89Show/hide
Query:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS
        MGSSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHG + ATKLMGSTPHDQLLI+TSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVS
Subjt:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS

Query:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
A0A5D3CSC4 Uncharacterized protein5.9e-7495.89Show/hide
Query:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS
        MGSSSSTFPVIC LHSVVAITSGTLMMFYMKEIYTIGHG + ATKLMGSTPHDQLLI+TSDSFSGLLLFAIGFLLFMV+FVKDREFQGFFAKGCTVLHVS
Subjt:  MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVS

Query:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MAMWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
A0A6J1EEX8 uncharacterized protein LOC1114335939.2e-7598.61Show/hide
Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
A0A6J1KLR6 uncharacterized protein LOC1114968761.0e-7397.22Show/hide
Query:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA
        SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHG DIATKLMGSTPHDQLL+QTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGC VLHVSMA
Subjt:  SSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMA

Query:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        MWRFYFERRVEDL+WDWLRQIVGDILLALSWVFFLVYSWREKYD
Subjt:  MWRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53035.1 unknown protein2.8e-5268.09Show/hide
Query:  STFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWR
        S F VIC+LHS++A+TSGTLMMFY ++    G G++IA+KL GSTPHD+LLIQ S SFSGLLLFAIG +LFMVSFVKD+EF  FFA G  +L+V MAMWR
Subjt:  STFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWR

Query:  FYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
          FE ++EDLA++W +Q +GDI LA+SWVFFLVYSWREKYD
Subjt:  FYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
AT3G15358.1 unknown protein1.6e-5065.73Show/hide
Query:  SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAM
        +S  F VIC+LHS++A+TSGTLMMFY ++    GHG+DIA KL GSTPHD+ LIQ S SFSGLLLFAIG +LFMVSFVKDREF  FFA G  +L++ MA+
Subjt:  SSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAM

Query:  WRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD
        WR  FE ++EDLA++  +Q +GDI LA+SWVFFLVY+WREKYD
Subjt:  WRFYFERRVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCATCGTCGTCAACTTTTCCGGTGATTTGCCTTCTCCACTCCGTCGTCGCAATCACCAGCGGAACGCTCATGATGTTCTACATGAAGGAGATTTACACGATCGG
CCATGGAAACGACATCGCCACTAAGTTAATGGGCTCTACGCCGCACGATCAGCTCCTGATCCAGACCTCCGATTCGTTTTCCGGCTTGCTCCTCTTCGCAATCGGGTTTC
TCCTCTTCATGGTTTCGTTCGTCAAGGACAGGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACGGTGCTTCACGTATCAATGGCGATGTGGAGATTCTATTTCGAGCGA
AGAGTGGAGGATTTGGCTTGGGATTGGCTGAGGCAGATTGTTGGTGATATTCTTCTTGCTTTATCTTGGGTGTTTTTTCTTGTTTATTCCTGGAGAGAAAAATATGATTA
G
mRNA sequenceShow/hide mRNA sequence
CGCCAGGTCACGGTTTCGATCGGCTCTCGTCGTCTTCTACCTAAACTCAAACTTCAGCTGTGCAATTAGGGTTTCTTCAATCACAGAGCAGCCATGTCCTCAGTTCCAAA
TCCCTAAGCAAACACGACGTCTCAACCGTCCGATCAAAATGGGATCATCGTCGTCAACTTTTCCGGTGATTTGCCTTCTCCACTCCGTCGTCGCAATCACCAGCGGAACG
CTCATGATGTTCTACATGAAGGAGATTTACACGATCGGCCATGGAAACGACATCGCCACTAAGTTAATGGGCTCTACGCCGCACGATCAGCTCCTGATCCAGACCTCCGA
TTCGTTTTCCGGCTTGCTCCTCTTCGCAATCGGGTTTCTCCTCTTCATGGTTTCGTTCGTCAAGGACAGGGAATTTCAAGGGTTCTTCGCCAAGGGATGTACGGTGCTTC
ACGTATCAATGGCGATGTGGAGATTCTATTTCGAGCGAAGAGTGGAGGATTTGGCTTGGGATTGGCTGAGGCAGATTGTTGGTGATATTCTTCTTGCTTTATCTTGGGTG
TTTTTTCTTGTTTATTCCTGGAGAGAAAAATATGATTAGTTTCCTCAGTAAATTGTTGTGTCTTTTCTTTTGATTCTTAGTTGCTAATTACATTGTGATTTTCTGGGTCT
GGATATCTGTTTAAAATTGGGGAAAGAAAGTGATTTAAATCTATAGGTGAATATGGCTGAAAGGGGGAAACCCCATCCCACTTTTCTTTTGTGTCTGTGTGTGAGTGTGT
GTGTTTTTTATCTTCCTTTGTAAATGCTTTTTGTGTTTTTTTTTTATACTTGTTATGTTCTTAATAAGCCAAAATGAAATACATTTCATATTGATGCTTTGTTGTTGAGT
TCTGCATTATAGTGAAAGAGAAGAACTGTTGATTGATTGATTGAAGGAATTTAGTGAAGAGAGCTGTAATGGGAGCTGGCAATTGAATCTTTGTAAGCCTTCTATCATGG
GATAGGATTAGCTTTAGAGTTCAGTGTTGAAATTCTGTATAATTCTGGTGTTTCTTGAAGTTGAATTTTAGAAGCCATTATCATTTTTGGAAGGCTAAGAAATATATGTT
AAGAAGTTGAAATATGGCTTTGTTTTTAAGAGGATTGTTCTGTTCCATATGCTTTCTACTTGTTGTATGAACTTGTGTGTATTCTTTCCTTCTTATGTACTCCCCTATTG
TCTAAGCTTTGTTCTTTACTTTGAAAAAGAGAGGGTGACCAAATAGGAAGCATTGCCTTTCTAGTTTTTTCTTCTCTTCAAGCTTAAGTTTTGGTTCAGTACCTTCAATT
AAAGGTTTGTTAGTTCCATGTACGTCTATTTTTATCCTCAACTTTGAAAAATAACTATTTTGGTCTAGTGGTCAACCTACTTAGTTGAGTTACCTTGACAACCAAATTTA
GTTTACTTTGGTTTCAGTCTACTCCCAACTATCAAATAATTAAAAGATGACAGCACTCTTAACCTAATACTTTACTTTGTTTTAAAGGATTGTCCTGTTGAGTTTTTTTT
TTTTTGAAACTAGGATAACACGTTCGTCCCTAGGCCAGGTACTGAGAGACATCGAAGGAGTAAAGCCACAG
Protein sequenceShow/hide protein sequence
MGSSSSTFPVICLLHSVVAITSGTLMMFYMKEIYTIGHGNDIATKLMGSTPHDQLLIQTSDSFSGLLLFAIGFLLFMVSFVKDREFQGFFAKGCTVLHVSMAMWRFYFER
RVEDLAWDWLRQIVGDILLALSWVFFLVYSWREKYD