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Sed0003256 (gene) of Chayote v1 genome

Gene IDSed0003256
OrganismSechium edule (Chayote v1)
Descriptionglycine-rich cell wall structural protein 1.8-like
Genome locationLG04:7160620..7161505
RNA-Seq ExpressionSed0003256
SyntenySed0003256
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577708.1 hypothetical protein SDJN03_25282, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1772.37Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

KAG6577709.1 hypothetical protein SDJN03_25283, partial [Cucurbita argyrosperma subsp. sororia]1.5e-1772.37Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

KAG6577710.1 hypothetical protein SDJN03_25284, partial [Cucurbita argyrosperma subsp. sororia]3.4e-1771.05Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASA+R+LL YDP  RH  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

XP_023552980.1 glycine-rich cell wall structural protein 2-like [Cucurbita pepo subsp. pepo]5.8e-1771.05Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASAAR+LL YDP   H  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

XP_023552983.1 glycine-rich cell wall structural protein 1.8-like [Cucurbita pepo subsp. pepo]4.4e-1771.05Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV  GLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DNVYGG +G GYGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

TrEMBL top hitse value%identityAlignment
A0A0A0L190 Uncharacterized protein6.2e-1759.18Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALGMLMEENMTITKEVERKEVLMVD
        MAI RVLC+G LL V LGLASA R+LL YDP AR  +YDRP PR  +D  H D+S DNVYGGS+ RGYG   SALG          KEVE+K V  VD
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALGMLMEENMTITKEVERKEVLMVD

A0A6J1E5N6 glycine-rich cell wall structural protein 1.8-like6.9e-1668.42Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   SALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

A0A6J1E6E4 glycine-rich protein DOT1-like isoform X26.9e-1668.42Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G GYG   SALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

A0A6J1HQH3 glycine-rich cell wall structural protein 1.8-like4.0e-1668.42Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLL+ LGLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G  YGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

A0A6J1L118 glycine-rich cell wall structural protein 1.8-like4.0e-1669.74Show/hide
Query:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG
        MAI RVLCL  LLLV LGLASAAR+LL YDP  RH  YDRPNPR  +D  H DES DN YGG +G  YGV GSALG
Subjt:  MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATCCAAAGAGTTCTGTGCCTCGGCCTTCTTCTCCTTGTGAGTTTAGGCTTAGCTTCCGCAGCTAGAAGCCTTCTAGTTTATGATCCTCCTGCACGCCACAATGA
GTATGATCGCCCCAACCCAAGAGGAGAGTTCGATCACGACCATCATGACGAATCCAACGACAACGTATACGGTGGAAGTGCTGGTAGAGGATATGGAGTGAGTGGCTCTG
CTCTCGGAATGCTCATGGAGGAGAACATGACAATAACAAAGGAAGTGGAGAGGAAGGAGGTTCTGATGGTGGATACTAAAAACCCTTTTAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATCCAAAGAGTTCTGTGCCTCGGCCTTCTTCTCCTTGTGAGTTTAGGCTTAGCTTCCGCAGCTAGAAGCCTTCTAGTTTATGATCCTCCTGCACGCCACAATGA
GTATGATCGCCCCAACCCAAGAGGAGAGTTCGATCACGACCATCATGACGAATCCAACGACAACGTATACGGTGGAAGTGCTGGTAGAGGATATGGAGTGAGTGGCTCTG
CTCTCGGAATGCTCATGGAGGAGAACATGACAATAACAAAGGAAGTGGAGAGGAAGGAGGTTCTGATGGTGGATACTAAAAACCCTTTTAAGTAA
Protein sequenceShow/hide protein sequence
MAIQRVLCLGLLLLVSLGLASAARSLLVYDPPARHNEYDRPNPRGEFDHDHHDESNDNVYGGSAGRGYGVSGSALGMLMEENMTITKEVERKEVLMVDTKNPFK