; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003261 (gene) of Chayote v1 genome

Gene IDSed0003261
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG08:967715..969628
RNA-Seq ExpressionSed0003261
SyntenySed0003261
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR039515 - NOT4, modified RING finger, HC subclass (C4C4-type)
IPR039780 - CCR4-NOT transcription complex subunit 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057903.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]4.0e-16383.33Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DDNLSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ+DQCSESS RGNVV QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS++ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLPNTDRRFGC G+ W+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISR
        CHKRILEEDGRCPGCRKPY+  P+DNETN+  GSPT P+ARSCS ISR
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISR

TYJ98591.1 suppressor protein SRP40 isoform X2 [Cucumis melo var. makuwa]2.0e-16283.29Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DDNLSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ+DQCSESS RGNVV QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS++ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLPNTDRRFGC G+ W+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTIS
        CHKRILEEDGRCPGCRKPY+  P+DNETN+  GSPT P+ARSCS IS
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTIS

XP_004138290.2 uncharacterized protein LOC101211244 [Cucumis sativus]3.0e-16383.38Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DD+LSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ DQCSESS RGNV+ QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDSS+ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLP TDRRFGC G+SW+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        CHKRILEEDGRCPGCRKPY+  P+DNETNV  GSPT P+ARSCS ISRS
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

XP_008453149.1 PREDICTED: uncharacterized protein LOC103493947 [Cucumis melo]1.8e-16383.38Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DDNLSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ+DQCSESS RGNVV QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS++ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLPNTDRRFGC G+ W+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        CHKRILEEDGRCPGCRKPY+  P+DNETN+  GSPT P+ARSCS ISRS
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

XP_038878939.1 uncharacterized protein LOC120071026 [Benincasa hispida]3.4e-16283.43Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RV+ SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TREDDNLSSKK+NMR+IGEEN  SVH H DF
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ DQCSESS RGNVV QL SCGDSR
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGC-EGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCL
        NELGVGDGDS ++RG IV+ ASMNCRAWRPDD FRPQSLPMLSKQLSLPNTDRRFGC  GI W CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCL
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGC-EGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        FCHKRI+EEDGRCPGCRKPY+  P+D+ETNV GGSP F +ARSCS ISRS
Subjt:  FCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

TrEMBL top hitse value%identityAlignment
A0A1S3BVJ1 uncharacterized protein LOC1034939478.6e-16483.38Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DDNLSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ+DQCSESS RGNVV QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS++ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLPNTDRRFGC G+ W+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        CHKRILEEDGRCPGCRKPY+  P+DNETN+  GSPT P+ARSCS ISRS
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

A0A5A7UPV5 Suppressor protein SRP40 isoform X21.9e-16383.33Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DDNLSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ+DQCSESS RGNVV QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS++ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLPNTDRRFGC G+ W+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISR
        CHKRILEEDGRCPGCRKPY+  P+DNETN+  GSPT P+ARSCS ISR
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISR

A0A5D3BIS7 Suppressor protein SRP40 isoform X29.6e-16383.29Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPLPKK RVR SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++TR+DDNLSS+K+NMREIGEEN  SVHHH D+
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR
        S+S SNSP S+GS ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEEE  EE DDDC DDWEAIAD+LAA++KQ+DQCSESS RGNVV QL SCGD R
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEE-DDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSR

Query:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF
        NELGVGDGDS++ERG IV+ ASMNCRAWRPDD FRPQSLP LSKQLSLPNTDRRFGC G+ W+CGGV+P PTSCPICFEDLDLTDSSFLPCFCGFRLCLF
Subjt:  NELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLF

Query:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTIS
        CHKRILEEDGRCPGCRKPY+  P+DNETN+  GSPT P+ARSCS IS
Subjt:  CHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTIS

A0A6J1C357 uncharacterized protein LOC1110070165.4e-15881.9Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSITNASISLAP+ARDLPLPKK RV+ SKLKQSKLDVRREQWLSRGAV+NKKWNEEDNR+DSVV++T +DDNLSSKK+NMREIG +NGGSVHH  DF
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRN
        SES SNSP S+ S ILGGN SGP FT SSSSSSCRSSSSGCRSGS+TEE   E DDD  DDWEAIAD+LAA++KQ DQCSESS RG+ V QL SCGDSRN
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRN

Query:  ELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC
        ELGVGDGDS +E G I + A M+CRAWRPDD FRPQSLP LSKQLSLPNTDRR+GC GI W+CGGVM  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFC
Subjt:  ELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        HKRILEEDGRCPGCRKPYE  P+D+ETNVHGGSPT P+ARSCS ISRS
Subjt:  HKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

A0A6J1JM47 uncharacterized protein LOC1114856371.0e-15681.32Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        MVTDSI NASISLAPNARDLPL KK R R SKLKQSKLDVRREQWLSRGA++NKKWNEEDNR+DS VV+T EDDNLSSKK+N REIGEE+  SVHHH D 
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRN
        SES SNSP S+GS ILGGN SG  FT SSSSSSCRSSSSGCRSGS+TEEE  EEDDDC +DWEA AD+L A++KQ DQCSESS RG+VV QLGSCGDSRN
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRN

Query:  ELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC
        ELGVGDGDSSIE G I R ASMN RAWRPDD  RPQSLP LSKQLSLPNTDRRFGC  + W+CGGV+P PTSCPICFEDLDLTDS+FLPC CGFRLCLFC
Subjt:  ELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFC

Query:  HKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        HKRILEEDGRCPGCRKPY+  P+DNETN H GSPTFP+ARSCS ISRS
Subjt:  HKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

SwissProt top hitse value%identityAlignment
O95628 CCR4-NOT transcription complex subunit 42.5e-1149.09Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYEHGPS
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY   P+
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYEHGPS

P34909 General negative regulator of transcription subunit 41.1e-0948Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYE
        CP+C E +D+TD +F PC CG+++C FC+  I    E +GRCP CR+ Y+
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL---EEDGRCPGCRKPYE

Q09818 Putative general negative regulator of transcription C16C9.04c1.4e-0951.06Show/hide
Query:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPY
        CP+C E++D++D +F PC CG+R+C FC   I E+ +GRCP CR+ Y
Subjt:  CPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEE-DGRCPGCRKPY

Q8BT14 CCR4-NOT transcription complex subunit 42.5e-1149.09Show/hide
Query:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYEHGPS
        P  CP+C E L++ D +F PC CG+++C FC  RI  +E+G CP CRKPY   P+
Subjt:  PTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRI-LEEDGRCPGCRKPYEHGPS

Arabidopsis top hitse value%identityAlignment
AT1G74870.1 RING/U-box superfamily protein1.2e-1626.8Show/hide
Query:  YSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDFSESSSNSPASVGSRILGGNGSGPLFTESS
        + KLKQ K+D RR+QW+S+    N    E   R+ S++      + L+ +K    +  ++    +   ++ + S ++SP SV  R            + S
Subjt:  YSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDFSESSSNSPASVGSRILGGNGSGPLFTESS

Query:  SSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRNELGVGDGDSSIERGGIVRSASMNCRAWRP
         S  C      C S  +TEEE  E  DD +D+W+   D+L + E   ++ S   T                       D   E   ++   S      + 
Subjt:  SSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRNELGVGDGDSSIERGGIVRSASMNCRAWRP

Query:  DDTFRPQ-SLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYE
        +     Q ++   S +    N++++ G                 CPIC E +D TD  F PC CGFR+CLFCH +I E + RCP CRK Y+
Subjt:  DDTFRPQ-SLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYE

AT3G45630.1 RNA binding (RRM/RBD/RNP motifs) family protein1.7e-1042.59Show/hide
Query:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYE
        +CP+C E++DLTD    PC CG+++C++C   I+      + +GRCP CR PY+
Subjt:  SCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRIL------EEDGRCPGCRKPYE

AT3G48070.1 RING/U-box superfamily protein3.6e-6145.71Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        M++DSITNAS + AP ARD    KK   R +KLKQSKL +RREQWLS+ A+ NK   EE      +  E  +  +L     N+    +E+    H H  F
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEK--QQDQCSESSTRGNVVPQLGSCGDS
         ES SNSP S    IL G  S P F+ SSS     S S G  SG++TEEE   +DD C DDWEAIAD+LAA ++  +++   ES      + Q    G +
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEK--QQDQCSESSTRGNVVPQLGSCGDS

Query:  RNELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCL
           L     DS        R    + +AWRPDD  RPQ LP L KQ S P  +  F           V   P+SCPIC+EDLDLTDS+FLPC CGFRLCL
Subjt:  RNELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS
        FCHK I + DGRCPGCRKPYE      E +V GG  T  +ARS S   RS
Subjt:  FCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISRS

AT3G48070.2 RING/U-box superfamily protein8.0e-6145.56Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        M++DSITNAS + AP ARD    KK   R +KLKQSKL +RREQWLS+ A+ NK   EE      +  E  +  +L     N+    +E+    H H  F
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEK--QQDQCSESSTRGNVVPQLGSCGDS
         ES SNSP S    IL G  S P F+ SSS     S S G  SG++TEEE   +DD C DDWEAIAD+LAA ++  +++   ES      + Q    G +
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEK--QQDQCSESSTRGNVVPQLGSCGDS

Query:  RNELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCL
           L     DS        R    + +AWRPDD  RPQ LP L KQ S P  +  F           V   P+SCPIC+EDLDLTDS+FLPC CGFRLCL
Subjt:  RNELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCL

Query:  FCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISR
        FCHK I + DGRCPGCRKPYE      E +V GG  T  +ARS S   R
Subjt:  FCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCSTISR

AT5G62910.1 RING/U-box superfamily protein6.5e-6346.61Show/hide
Query:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF
        M+TDSITNAS + AP  RD    K+N  + +K+KQ+KL +RREQWLS+ AV NK+  EE +     V  +++  + SS KV  RE     G ++ HH  F
Subjt:  MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDF

Query:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEE-IGEEDDDCFDDWEAIADSLAASEK----------QQDQCSESSTRGNVV
         ES SNS        +GG  S   F+  SS SS  SSSSG  SG++TEEE + ++DD C DDWEA+AD+LAA E+           ++Q S   +  NV 
Subjt:  SESSSNSPASVGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEE-IGEEDDDCFDDWEAIADSLAASEK----------QQDQCSESSTRGNVV

Query:  PQLGSCGDSRNELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLP
            S  D+ + +GV D      R    +  S   RAWR DD  RPQ LP L+KQLS P  D+RF    I          P+SCPIC+EDLDLTDS+FLP
Subjt:  PQLGSCGDSRNELGVGDGDSSIERGGIVRSASMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLP

Query:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCS
        C CGFRLCLFCHK I + DGRCPGCRKPYE      ET++ GG  T  +ARS S
Subjt:  CFCGFRLCLFCHKRILEEDGRCPGCRKPYEHGPSDNETNVHGGSPTFPMARSCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTACTGATTCAATCACCAATGCTTCAATTTCTTTGGCTCCTAACGCTCGGGATTTGCCCTTGCCCAAGAAGAACAGGGTTAGGTATTCCAAATTGAAGCAGTCGAA
GCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAGGAACAAAAAATGGAATGAAGAAGACAACCGAGTTGACTCAGTGGTCGTCGAAACGAGGGAAGATG
ATAATCTTTCCTCTAAGAAAGTAAATATGAGAGAAATAGGAGAAGAGAACGGCGGATCGGTCCACCACCATGTCGATTTCTCGGAGTCGTCATCCAATAGCCCCGCTAGT
GTTGGCAGTAGAATCTTGGGTGGTAATGGTTCGGGTCCTCTTTTTACTGAGAGTAGCAGTAGTAGTAGCTGCCGTAGCAGTTCTAGTGGTTGTCGATCAGGGAGTGTGAC
GGAAGAGGAGATAGGAGAAGAAGATGATGACTGCTTTGATGATTGGGAGGCTATTGCCGATTCCCTAGCCGCCAGTGAGAAGCAACAGGATCAATGTTCTGAATCTTCCA
CTAGGGGTAATGTTGTTCCCCAATTGGGTTCTTGCGGAGATAGTAGAAATGAGTTGGGTGTAGGAGATGGTGACTCAAGTATTGAACGTGGGGGAATTGTGCGGAGCGCT
TCAATGAATTGCCGAGCATGGAGGCCTGATGATACCTTTCGTCCTCAGAGTTTGCCCATGCTGTCGAAGCAGCTTAGTTTACCGAATACAGACCGGCGTTTTGGATGTGA
AGGCATCTCTTGGTCCTGTGGTGGTGTTATGCCTGCGCCTACATCTTGTCCAATTTGCTTTGAAGATTTGGACCTTACAGACTCAAGCTTTTTACCTTGTTTCTGTGGAT
TCCGGCTTTGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGAACATGGTCCTTCCGACAATGAGACAAATGTACAT
GGTGGCAGCCCAACATTCCCAATGGCTCGTTCTTGTAGCACGATTTCAAGGTCTTAG
mRNA sequenceShow/hide mRNA sequence
AAACGAACGAGCGAGCGAAGCAGAGCAATTTCCGTTATCCATTCTCTCTCTCGAAGATTTTTCTGCTGGAAAAAATATCCACAAAAATTAGGGTTTCTTTGCGATCTTTG
ACCTTTCAATTCGATTTCAACTGTTCAATCATGGTTACTGATTCAATCACCAATGCTTCAATTTCTTTGGCTCCTAACGCTCGGGATTTGCCCTTGCCCAAGAAGAACAG
GGTTAGGTATTCCAAATTGAAGCAGTCGAAGCTTGATGTTCGTCGGGAACAATGGCTTTCTCGAGGTGCTGTAAGGAACAAAAAATGGAATGAAGAAGACAACCGAGTTG
ACTCAGTGGTCGTCGAAACGAGGGAAGATGATAATCTTTCCTCTAAGAAAGTAAATATGAGAGAAATAGGAGAAGAGAACGGCGGATCGGTCCACCACCATGTCGATTTC
TCGGAGTCGTCATCCAATAGCCCCGCTAGTGTTGGCAGTAGAATCTTGGGTGGTAATGGTTCGGGTCCTCTTTTTACTGAGAGTAGCAGTAGTAGTAGCTGCCGTAGCAG
TTCTAGTGGTTGTCGATCAGGGAGTGTGACGGAAGAGGAGATAGGAGAAGAAGATGATGACTGCTTTGATGATTGGGAGGCTATTGCCGATTCCCTAGCCGCCAGTGAGA
AGCAACAGGATCAATGTTCTGAATCTTCCACTAGGGGTAATGTTGTTCCCCAATTGGGTTCTTGCGGAGATAGTAGAAATGAGTTGGGTGTAGGAGATGGTGACTCAAGT
ATTGAACGTGGGGGAATTGTGCGGAGCGCTTCAATGAATTGCCGAGCATGGAGGCCTGATGATACCTTTCGTCCTCAGAGTTTGCCCATGCTGTCGAAGCAGCTTAGTTT
ACCGAATACAGACCGGCGTTTTGGATGTGAAGGCATCTCTTGGTCCTGTGGTGGTGTTATGCCTGCGCCTACATCTTGTCCAATTTGCTTTGAAGATTTGGACCTTACAG
ACTCAAGCTTTTTACCTTGTTTCTGTGGATTCCGGCTTTGCCTTTTCTGTCACAAGAGGATTCTTGAAGAGGATGGGCGCTGTCCTGGTTGCAGGAAGCCATATGAACAT
GGTCCTTCCGACAATGAGACAAATGTACATGGTGGCAGCCCAACATTCCCAATGGCTCGTTCTTGTAGCACGATTTCAAGGTCTTAGGTAGTGGTCAGTTTCTGTGGTTT
ATGTCCGTTTTTTGTTCCTGCATCTCTTTGGGTATTTGAGTGTTGAAGTATGTTTATGAGACTGAGAACCTTTAACTGATCTGCTTCGTACATGAGTGTGGCTCTTAAAT
TGGGGTTCACCTGCCAATGTAGAGGACTTATTTCGGACTTGATATGTGAATACTGAATAGACAAGGTGGTATAGAAATTAATACATGGAATAATGATACAACAATTGTTA
CTATTATCTTATTTTGTGCTTGCATATATATCATATGAATGCTGAACTGTTCAATTTAATACTTTCCTCTTTAGTCTTACTATTTTTATGAGATATAGTGTCATGATTGA
CTTCTTACGTGCGGTTTTATAGAATATGAGTCTCAGAAGTATATACACTAGAGAATAGAGATGTGGAAATATTTGTAATAACTTGTATGTTACACAACTAATTGTTCAGT
GCTTTCGTTCATAGCCAGC
Protein sequenceShow/hide protein sequence
MVTDSITNASISLAPNARDLPLPKKNRVRYSKLKQSKLDVRREQWLSRGAVRNKKWNEEDNRVDSVVVETREDDNLSSKKVNMREIGEENGGSVHHHVDFSESSSNSPAS
VGSRILGGNGSGPLFTESSSSSSCRSSSSGCRSGSVTEEEIGEEDDDCFDDWEAIADSLAASEKQQDQCSESSTRGNVVPQLGSCGDSRNELGVGDGDSSIERGGIVRSA
SMNCRAWRPDDTFRPQSLPMLSKQLSLPNTDRRFGCEGISWSCGGVMPAPTSCPICFEDLDLTDSSFLPCFCGFRLCLFCHKRILEEDGRCPGCRKPYEHGPSDNETNVH
GGSPTFPMARSCSTISRS