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Sed0003278 (gene) of Chayote v1 genome

Gene IDSed0003278
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG01:4983032..4986150
RNA-Seq ExpressionSed0003278
SyntenySed0003278
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570850.1 QWRF motif-containing protein 3, partial [Cucurbita argyrosperma subsp. sororia]9.0e-4189.58Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAA RQARA+ RVSSPQS ATLI +RGLA AADHHGPPKVNCW DP SPSKWKEEHFVIVSLSGWGLL FGGYKFFTGGKGKKDEKLVEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
XP_008448206.1 PREDICTED: uncharacterized protein LOC103490467 [Cucumis melo]1.1e-4190.62Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAAVRQARA+ARVSSPQSTA LIHKRGLA AADHHGPPKVNCWQDP SPSKWKEEHFV+VSLSGWG+LIFGGYKFFT GKG KDEK+VEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
XP_022140380.1 uncharacterized protein LOC111011068 [Momordica charantia]1.8e-4190.62Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAAVRQARA+ RVSSPQSTATLIH+RGLA AADHHGPPKVNCW+DP SPSKWKEEHFVIVSLSGWGLL FGGYKFFT GKGKK+EKLVEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
XP_022944460.1 uncharacterized protein LOC111448907 [Cucurbita moschata]9.0e-4189.58Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAA RQARA+ RVSSPQS ATLI +RGLA AADHHGPPKVNCW DP SPSKWKEEHFVIVSLSGWGLL FGGYKFFTGGKGKKDEKLVEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
XP_038900519.1 uncharacterized protein LOC120087716 [Benincasa hispida]3.1e-4190.62Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAAVRQARA+ RVSSPQSTATLIH+RGLA AADHHG PKVNCWQDP SPSKWKEEHFVIVSLSGWGLL FGGYKFFT GKGKKDEK+VEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
TrEMBL top hitse value%identityAlignment
A0A1S3BJS2 uncharacterized protein LOC1034904675.1e-4290.62Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAAVRQARA+ARVSSPQSTA LIHKRGLA AADHHGPPKVNCWQDP SPSKWKEEHFV+VSLSGWG+LIFGGYKFFT GKG KDEK+VEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
A0A5A7U364 Uncharacterized protein1.8e-3992.22Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDE
        MATLAAAAVRQARA+ARVSSPQSTA LIHKRGLA AADHHGPPKVNCWQDP SPSKWKEEHFV+VSLSGWGLLIFGGYKFFT GKG KDE
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDE
A0A6J1CEY6 uncharacterized protein LOC1110110688.8e-4290.62Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAAVRQARA+ RVSSPQSTATLIH+RGLA AADHHGPPKVNCW+DP SPSKWKEEHFVIVSLSGWGLL FGGYKFFT GKGKK+EKLVEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
A0A6J1FYP0 uncharacterized protein LOC1114489074.4e-4189.58Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAAAA RQARA+ RVSSPQS ATLI +RGLA AADHHGPPKVNCW DP SPSKWKEEHFVIVSLSGWGLL FGGYKFFTGGKGKKDEKLVEAS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
A0A6J1I3K1 uncharacterized protein LOC1114695976.3e-4087.5Show/hide
Query:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
        MATLAA AVRQARA+ R SSPQSTATLI +RGLA AADHHGPPKVNCWQDP SPSKWKEEHFVIVSLSGWGLL +GGYKFFTGGKGKKDEK V AS
Subjt:  MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G20820.1 unknown protein6.0e-1951.81Show/hide
Query:  AAAVRQARAIARVSSPQ---STATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGK
        A+  R+A ++A++ S +     A++  +R LA AADHHG  KV+ W+ PT+P  WKEEHFV++SLSGWGLL + GYK  TGGK
Subjt:  AAAVRQARAIARVSSPQ---STATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGK
AT2G20820.2 unknown protein4.8e-0842.62Show/hide
Query:  AAAVRQARAIARVSSPQ---STATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFV
        A+  R+A ++A++ S +     A++  +R LA AADHHG  KV+ W+ PT+P  WKEEH++
Subjt:  AAAVRQARAIARVSSPQ---STATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACCTTAGCGGCTGCCGCAGTTCGTCAAGCCAGAGCCATAGCTCGAGTTTCCTCTCCACAGTCAACCGCCACCCTTATTCACAAGCGCGGTCTCGCCAGCGCAGC
TGACCATCATGGACCACCAAAGGTTAACTGTTGGCAAGATCCTACGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCAGGATGGGGTCTACTCA
TCTTTGGAGGGTACAAGTTCTTTACCGGGGGCAAAGGAAAGAAGGATGAGAAACTTGTGGAAGCATCATAA
mRNA sequenceShow/hide mRNA sequence
GGAGGGTTAATACGACGTCGTGTGGCTTTATTTGTCTCTATTTCTTCGCAGCGTTCCGCCGTATCGGAGTCATTGATCTCTCAGTTGGGAAGAGAATCTGAATCCATGGC
TACCTTAGCGGCTGCCGCAGTTCGTCAAGCCAGAGCCATAGCTCGAGTTTCCTCTCCACAGTCAACCGCCACCCTTATTCACAAGCGCGGTCTCGCCAGCGCAGCTGACC
ATCATGGACCACCAAAGGTTAACTGTTGGCAAGATCCTACGAGCCCATCTAAATGGAAGGAAGAGCATTTTGTGATTGTCTCTCTATCAGGATGGGGTCTACTCATCTTT
GGAGGGTACAAGTTCTTTACCGGGGGCAAAGGAAAGAAGGATGAGAAACTTGTGGAAGCATCATAATTAGCTGAGCCAAGGACTTTTTCCGATTGTTCTGAAGTACTCCT
CATAATAATGTATTTCCGTGAACCTCACTCTTCTACGGATTTCATTTCAATCCCGAATTGTTTCTCAGACTAGTATATGATCTTATCTTGTAGTTTTTTTCTCGACATTT
TTTGGTTGTTTCGTGCACCAAAGTCCTATATCCAATAATACCATTTTACCAACATTTAAGCCCCAATACCCTCGTTCATAGAATTTGAAGGGAATGCATTTGTGGTTCAG
ATTTTGTCATTGAACAAGGTATTTTTGAGTAAAAAAGACTCGATTAATTGCTTC
Protein sequenceShow/hide protein sequence
MATLAAAAVRQARAIARVSSPQSTATLIHKRGLASAADHHGPPKVNCWQDPTSPSKWKEEHFVIVSLSGWGLLIFGGYKFFTGGKGKKDEKLVEAS