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Sed0003285 (gene) of Chayote v1 genome

Gene IDSed0003285
OrganismSechium edule (Chayote v1)
DescriptionS-protein homolog
Genome locationLG09:26784310..26784741
RNA-Seq ExpressionSed0003285
SyntenySed0003285
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008458036.1 PREDICTED: pumilio homolog 15-like [Cucumis melo]5.1e-4055.32Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        MG ISFK  LLVFLVVS + +AHS  L+ WEI+I N L  GQ LFV CKSKD+DLG++T+  G ++ W F+VN W TTLFWCY+R+P G+++ FDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W   + G  L+  S    E +H WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

XP_011659760.2 S-protein homolog 74-like [Cucumis sativus]7.4e-3955.32Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        MG ISFK  LLVFLVVS + +A S  L+ WEI+I N L  G+ LFV CKSKD+DLGE+T+  G ++ W F+VN W TTLFWCY+R+P G  + FDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W A + G  L+  S    E +H WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

XP_022960229.1 S-protein homolog 74-like [Cucurbita moschata]4.6e-4157.45Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        M  IS K  +LVFLV SA+ +A S   +KWEI+I N L  GQ +FVHCKSKDNDLGE T+  G ++ W F+VNFW TTLFWCY+R+P G++MTFDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W A + G  L+  S+   E VH WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

XP_023515021.1 S-protein homolog 74-like [Cucurbita pepo subsp. pepo]6.0e-4157.45Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        M  IS K  +LVFLV SA+ +A S   +KWEI+I N L  GQ +FVHCKSKDNDLGE T+  G ++ W F+VNFW TTLFWCY+R+P G++MTFDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W A + G  L+  S+   E VH WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

XP_038896413.1 S-protein homolog 1-like [Benincasa hispida]1.6e-3855.32Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        MG I FK  L V LV+SA+  A    L+ WEI+I N L  GQ LFVHCKSKD DLGE+T+  G ++ W F+VN WRTTLFWCY+R+P G++MTFDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEGLRIQSKTS--PELVHKWK
        + T WLR++CDD IC+W A + G+ ++  +S   E +H WK
Subjt:  EWTNWLRIRCDDNICHWFALNEGLRIQSKTS--PELVHKWK

TrEMBL top hitse value%identityAlignment
A0A0A0K6N8 S-protein homolog3.0e-3854.61Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        MG ISFK  LLVFL VS + +  S  L+ WEI+I N L  GQ LFVHCKSKD+DLGE+T+  G ++ W F+VN W TTLFWCY+R+P G  + F+AFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W A + G  L+  S    E +H WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

A0A1S3C711 S-protein homolog2.5e-4055.32Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        MG ISFK  LLVFLVVS + +AHS  L+ WEI+I N L  GQ LFV CKSKD+DLG++T+  G ++ W F+VN W TTLFWCY+R+P G+++ FDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W   + G  L+  S    E +H WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

A0A5D3E4D8 S-protein homolog2.5e-4055.32Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        MG ISFK  LLVFLVVS + +AHS  L+ WEI+I N L  GQ LFV CKSKD+DLG++T+  G ++ W F+VN W TTLFWCY+R+P G+++ FDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W   + G  L+  S    E +H WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

A0A6J1HAC3 S-protein homolog2.2e-4157.45Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        M  IS K  +LVFLV SA+ +A S   +KWEI+I N L  GQ +FVHCKSKDNDLGE T+  G ++ W F+VNFW TTLFWCY+R+P G++MTFDAFWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CD NIC+W A + G  L+  S+   E VH WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

A0A6J1KS80 S-protein homolog1.0e-3853.19Show/hide
Query:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE
        M  I  K  +LVF+V SA+ +A S   +KWEI+I N L  GQ +FVHC+SKDNDLGE T+    ++ W F+VN W TTL+WCY+R+P G++MTFD+FWVE
Subjt:  MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRP-GYDMTFDAFWVE

Query:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK
        + T WLR++CDDNIC+W A + G  L+  S+   E VH WK
Subjt:  EWTNWLRIRCDDNICHWFALNEG--LRIQSKTSPELVHKWK

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 29.1e-0829.46Show/hide
Query:  TKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEG-LRIQ
        +K  + I+N+L     L  HCKSKD+DLG +T+  GE +++ F   F+  TL++C    P    +FD  + +   +    +C+ + C W     G  R  
Subjt:  TKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEG-LRIQ

Query:  SKTSP-ELVHKW
         +T   +L + W
Subjt:  SKTSP-ELVHKW

F4JLS0 S-protein homolog 14.1e-1633.91Show/hide
Query:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI
        ++++W++ + N L  G+ LF+HCKSK++DLGE  +    +++W F  N   +T FWCY+ +    M  + FW +     L  RC    C W A  +GL +
Subjt:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI

Query:  QSKTSPE--LVHKWK
         +  S E  L  KW+
Subjt:  QSKTSPE--LVHKWK

Q2HQ46 S-protein homolog 749.7e-1836.52Show/hide
Query:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI
        ++++W++ + N L  G+ LF+HCKSK+NDLG+  +   ++++W F  N   +TLFWCY+ +    M    FW +     L  RCD   C W A N+GL +
Subjt:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI

Query:  QSKTSPE--LVHKWK
         +    E  L  KWK
Subjt:  QSKTSPE--LVHKWK

Q9FMQ4 S-protein homolog 31.3e-0632.65Show/hide
Query:  KKHLLVFLVVSAIVVAHSTRLTKWEIN--------IHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAF
        K  + V ++   I +A S   T +++N        I N L  G  L +HCKS D+DLG K +     +++ FR +   TTLF+C+   PG    FD +
Subjt:  KKHLLVFLVVSAIVVAHSTRLTKWEIN--------IHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAF

Q9LW22 S-protein homolog 211.2e-0738.82Show/hide
Query:  KHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQH--LFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYI-RRPGY
        K+L +FL V  + +       K  I + N L+      L VHCKSK+ND+G K +  GE  ++ F+ NFW TT FWC + + P Y
Subjt:  KHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQH--LFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYI-RRPGY

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family6.3e-1231.88Show/hide
Query:  KHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQ---HLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNW
        K+L VFL    + +  +      +++I N+LD  Q    LFV CKS   D+G+  +  G+ Y +  R NFW+TTLFWC  R      T   F V E+   
Subjt:  KHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQ---HLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNW

Query:  LRIRCDDNICHWFALNEGLRIQ-SKTSPELVHKWKPIP
        +          W A  +G+  + ++ +   VH WKP+P
Subjt:  LRIRCDDNICHWFALNEGLRIQ-SKTSPELVHKWKPIP

AT3G26880.1 Plant self-incompatibility protein S1 family8.5e-0938.82Show/hide
Query:  KHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQH--LFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYI-RRPGY
        K+L +FL V  + +       K  I + N L+      L VHCKSK+ND+G K +  GE  ++ F+ NFW TT FWC + + P Y
Subjt:  KHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQH--LFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYI-RRPGY

AT4G16195.1 Plant self-incompatibility protein S1 family6.5e-0929.46Show/hide
Query:  TKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEG-LRIQ
        +K  + I+N+L     L  HCKSKD+DLG +T+  GE +++ F   F+  TL++C    P    +FD  + +   +    +C+ + C W     G  R  
Subjt:  TKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEG-LRIQ

Query:  SKTSP-ELVHKW
         +T   +L + W
Subjt:  SKTSP-ELVHKW

AT4G16295.1 S-protein homologue 12.9e-1733.91Show/hide
Query:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI
        ++++W++ + N L  G+ LF+HCKSK++DLGE  +    +++W F  N   +T FWCY+ +    M  + FW +     L  RC    C W A  +GL +
Subjt:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI

Query:  QSKTSPE--LVHKWK
         +  S E  L  KW+
Subjt:  QSKTSPE--LVHKWK

AT4G29035.1 Plant self-incompatibility protein S1 family6.9e-1936.52Show/hide
Query:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI
        ++++W++ + N L  G+ LF+HCKSK+NDLG+  +   ++++W F  N   +TLFWCY+ +    M    FW +     L  RCD   C W A N+GL +
Subjt:  RLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCDDNICHWFALNEGLRI

Query:  QSKTSPE--LVHKWK
         +    E  L  KWK
Subjt:  QSKTSPE--LVHKWK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCACCATCTCTTTCAAGAAGCACCTTTTGGTGTTCCTGGTTGTCTCGGCCATTGTCGTAGCTCACTCGACAAGATTGACCAAGTGGGAGATCAACATTCATAATAA
TTTGGATTTTGGACAACATCTATTCGTGCATTGCAAGTCAAAAGATAATGACTTGGGTGAAAAAACTATTGGTGGGGGCGAAAAATACACGTGGGGCTTCAGAGTGAACT
TTTGGCGTACGACGCTGTTTTGGTGCTATATACGCAGGCCGGGTTATGACATGACATTCGATGCTTTCTGGGTCGAGGAGTGGACCAATTGGTTGCGCATCAGATGTGAC
GACAATATTTGTCATTGGTTTGCACTAAACGAAGGACTTCGCATCCAATCTAAAACTTCACCAGAGCTCGTTCACAAATGGAAACCCATACCATTTAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGCACCATCTCTTTCAAGAAGCACCTTTTGGTGTTCCTGGTTGTCTCGGCCATTGTCGTAGCTCACTCGACAAGATTGACCAAGTGGGAGATCAACATTCATAATAA
TTTGGATTTTGGACAACATCTATTCGTGCATTGCAAGTCAAAAGATAATGACTTGGGTGAAAAAACTATTGGTGGGGGCGAAAAATACACGTGGGGCTTCAGAGTGAACT
TTTGGCGTACGACGCTGTTTTGGTGCTATATACGCAGGCCGGGTTATGACATGACATTCGATGCTTTCTGGGTCGAGGAGTGGACCAATTGGTTGCGCATCAGATGTGAC
GACAATATTTGTCATTGGTTTGCACTAAACGAAGGACTTCGCATCCAATCTAAAACTTCACCAGAGCTCGTTCACAAATGGAAACCCATACCATTTAGTTAA
Protein sequenceShow/hide protein sequence
MGTISFKKHLLVFLVVSAIVVAHSTRLTKWEINIHNNLDFGQHLFVHCKSKDNDLGEKTIGGGEKYTWGFRVNFWRTTLFWCYIRRPGYDMTFDAFWVEEWTNWLRIRCD
DNICHWFALNEGLRIQSKTSPELVHKWKPIPFS