; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003291 (gene) of Chayote v1 genome

Gene IDSed0003291
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L34
Genome locationLG12:30535834..30538867
RNA-Seq ExpressionSed0003291
SyntenySed0003291
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0042254 - ribosome biogenesis (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR008195 - Ribosomal protein L34Ae
IPR018065 - Ribosomal protein L34e, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB1208050.1 60S ribosomal protein L34 [Morella rubra]3.9e-5497.44Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

KAG6583599.1 Crooked neck-like protein 1, partial [Cucurbita argyrosperma subsp. sororia]3.0e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

XP_004138175.3 60S ribosomal protein L34 [Cucumis sativus]3.0e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

XP_010066914.2 60S ribosomal protein L34 [Eucalyptus grandis]2.3e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAKDK+A
Subjt:  KIVKKVLKIQKAKDKVA

XP_038893923.1 60S ribosomal protein L34-like [Benincasa hispida]3.0e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

TrEMBL top hitse value%identityAlignment
A0A6A1VA59 60S ribosomal protein L341.9e-5497.44Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

A0A6J1DF78 60S ribosomal protein L341.5e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

A0A6J1HLN7 60S ribosomal protein L34-like1.5e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

A0A6J1I6I6 60S ribosomal protein L34-like1.5e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

I3NMK4 60S ribosomal protein L34A3.3e-5498.29Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K A
Subjt:  KIVKKVLKIQKAKDKVA

SwissProt top hitse value%identityAlignment
P40590 60S ribosomal protein L343.7e-5594.87Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYR+RHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQK K+K A
Subjt:  KIVKKVLKIQKAKDKVA

P41098 60S ribosomal protein L344.8e-5594.02Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRLTYRKRHSYATKSNQHRVVKTPGGKL+YQ+TKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLKIQKAK+K+A
Subjt:  KIVKKVLKIQKAKDKVA

Q42351 60S ribosomal protein L34-11.4e-5493.16Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLK+QKAK+KVA
Subjt:  KIVKKVLKIQKAKDKVA

Q9FE65 60S ribosomal protein L34-25.4e-5492.31Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLK+QKAK+KVA
Subjt:  KIVKKVLKIQKAKDKVA

Q9LJW6 60S ribosomal protein L34-31.0e-5290.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLK+QKAK+K A
Subjt:  KIVKKVLKIQKAKDKVA

Arabidopsis top hitse value%identityAlignment
AT1G26880.1 Ribosomal protein L34e superfamily protein1.0e-5593.16Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLK+QKAK+KVA
Subjt:  KIVKKVLKIQKAKDKVA

AT1G26880.2 Ribosomal protein L34e superfamily protein1.5e-4391.3Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII
        MVQRL YR RHSYATKSNQHR+VKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+EYKRSRL+RNRRTVNRAYGGVLSG AVRER +
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERII

AT1G69620.1 ribosomal protein L343.8e-5592.31Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP EYKRSRL+RNRRTVNRAYGGVLSG AVRERIIRAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLK+QKAK+KVA
Subjt:  KIVKKVLKIQKAKDKVA

AT3G28900.1 Ribosomal protein L34e superfamily protein7.2e-5490.6Show/hide
Query:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ
        MVQRL YR RHSYATKSNQHR+VKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARN RTVNRAYGGVLSG AVRERI+RAFLVEEQ
Subjt:  MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQ

Query:  KIVKKVLKIQKAKDKVA
        KIVKKVLK+QKAK+K A
Subjt:  KIVKKVLKIQKAKDKVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTCAGCGTCTTACATACCGCAAGCGCCATAGCTATGCCACCAAATCGAACCAGCACCGTGTCGTCAAAACTCCCGGCGGGAAGCTTGTGTACCAGACTACCAAGAA
ACGAGCCAGTGGACCTAAATGTCCGGTTACCGGAAAACGGATTCAGGGGATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTTGCTAGGAACCGGAGGACCG
TGAATCGTGCATACGGTGGCGTTTTATCCGGTGGTGCCGTTAGGGAGAGGATCATTCGAGCCTTTTTGGTGGAAGAGCAAAAGATTGTGAAGAAGGTATTGAAGATTCAG
AAAGCAAAGGACAAAGTAGCAAAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
CATGGGATTCGTCTTCTTATTTGTATTCTCAATAAACCCTAAAAAATCTGTGCAGCAGCTCCTGATCCAGAGCCAAGAAGAGTGGAGAATCGTCGAAAATGGTTCAGCGT
CTTACATACCGCAAGCGCCATAGCTATGCCACCAAATCGAACCAGCACCGTGTCGTCAAAACTCCCGGCGGGAAGCTTGTGTACCAGACTACCAAGAAACGAGCCAGTGG
ACCTAAATGTCCGGTTACCGGAAAACGGATTCAGGGGATTCCTCACTTGAGGCCTGCTGAATACAAGAGGTCTAGACTTGCTAGGAACCGGAGGACCGTGAATCGTGCAT
ACGGTGGCGTTTTATCCGGTGGTGCCGTTAGGGAGAGGATCATTCGAGCCTTTTTGGTGGAAGAGCAAAAGATTGTGAAGAAGGTATTGAAGATTCAGAAAGCAAAGGAC
AAAGTAGCAAAGAGTTAAACTGGCCATTGGTGATTTTAGAACATTGAAGAAATTTTGAATTTTTGTGACTTTATGGTTTGTTTTAGTCATCAAGTTTGATATGGAAGGAT
TGGTATTTTTGCTCCAGAATTAAACTTTAATTGATATGGTATACACTTTTATGATATATTTGTGTTGGTTATTAGTTGTCTTAGTGGCATTTCCTCACAATTTCTTAACA
ATTTCCCTGCATGAATTTAATCAAATGTCATGATTGATCTTCTTACCAATTTCTT
Protein sequenceShow/hide protein sequence
MVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLARNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQ
KAKDKVAKS