; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003308 (gene) of Chayote v1 genome

Gene IDSed0003308
OrganismSechium edule (Chayote v1)
DescriptionGlycine-rich cell wall structural protein-like
Genome locationLG12:2322047..2323031
RNA-Seq ExpressionSed0003308
SyntenySed0003308
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK17403.1 glycine-rich cell wall structural protein-like [Cucumis melo var. makuwa]2.4e-3280Show/hide
Query:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG
        MA FSLR V FCFC+LIA VGA NNVED KGLFHRPLGF K  + FRGGGL        GGG+GGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG
Subjt:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG

Query:  GGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGL--------GGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGG
        GGLGGGGG GGGGGLGGGGGLGHGI+KRG+KRGGLGGGGGLGGGGGL        GGGGGLGHGI KRGFK G LGGGGGL  GGGGGLGGGGGLGGGGG
Subjt:  GGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGL--------GGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGG

Query:  FGGGAGGGGGLGGGGGAGFGGGAGGGGGAG
             GGGGGLGGGGG G GGG GGGGG G
Subjt:  FGGGAGGGGGLGGGGGAGFGGGAGGGGGAG

XP_011652751.2 glycine-rich cell wall structural protein 1 [Cucumis sativus]1.1e-3481.32Show/hide
Query:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGL----GGGGGFGG------GGGVGGGGGFGGGAGGGFGGGAGGGFGGGGG
        MA FSLR V FCFC+LIALV A NNVED KGLFHRPLGFYK  + FRGGGL    GGGGGFGG      GGG GGGGG GGG G G GGG GGG GGGGG
Subjt:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGL----GGGGGFGG------GGGVGGGGGFGGGAGGGFGGGAGGGFGGGGG

Query:  LGGGGGLGGGGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGG----GGGGGLGGGGG
        LGGGGGLGGGGGLGGGGG GGGGGLGGGGGLGHGIYKRG+KRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFK GGLGGGGGLGG    GGGGGLGGGGG
Subjt:  LGGGGGLGGGGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGG----GGGGGLGGGGG

Query:  LGGGGGFGGGA--GGGGGLGGGGGAGFGGGA--GGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG
        LGGGGG GGG   GGGGGLGGGGG GFGGG   GGG G G GGG GGG G G GGGFGGGGG GGGGGFGGGG
Subjt:  LGGGGGFGGGA--GGGGGLGGGGGAGFGGGA--GGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG

XP_022927643.1 glycine-rich protein 5-like [Cucurbita moschata]2.1e-2869.5Show/hide
Query:  MASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGGG
        MASFSLR  AFCFCLLIALVGANNVED+K  FHRPLG++K +GF GGGLGGGGGFGGGG                    GGGF                 
Subjt:  MASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGGG

Query:  LGGGGGFGGGGGLGGGGGLGHGIYKRGFKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGG
           GGG+GGGGGLGGGGG GHGI+K+GF+       GGLGGGGGLGGGGGLGGGGG+GHGIYKRGFKH   GGGGG G GGGGG GGGGGLGGGGG GG 
Subjt:  LGGGGGFGGGGGLGGGGGLGHGIYKRGFKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGG

Query:  AGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG
         GGGGGLGGG G G+GGGAGGG G GFGGGAGGGGGLGGGGGFGGGGG+GGG GFGGGG
Subjt:  AGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG

XP_023526931.1 glycine-rich cell wall structural protein-like [Cucurbita pepo subsp. pepo]6.1e-2878.42Show/hide
Query:  MASFSLRVVAFCFCLLIALVGANN-VEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGG--GGGFGGGAGGGFGGGA--------GGGFGGGGGL
        MASFSLR VAF  C+ IALVGA+N VED+K LFHRPLGF K RGFRGGGLGGG G GGGGG GG  GGGFGGGAGGGFGGGA        GGG GGGGGL
Subjt:  MASFSLRVVAFCFCLLIALVGANN-VEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGG--GGGFGGGAGGGFGGGA--------GGGFGGGGGL

Query:  GGGGGLGGGGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGL------GHGIYKRGFKHGGLGGGGGLGG----GGGGGL
        GGGGGLGGGGGLGGGGG GGGGGLGGGGGLGHGIYKRGFK GGLGGGGGLGGGGGLGGGGGL      GHGIYKRGFK GGLGGGGG+GG    GGG GL
Subjt:  GGGGGLGGGGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGL------GHGIYKRGFKHGGLGGGGGLGG----GGGGGL

Query:  GGGGGLGGGGGFGGGAGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGG--GGGFGG--GGGFGGGG
        GGGGGLGGGGG GGG G GGG+GGG G G GGG GGG G G GGGAGGG G+G GGG GG  GGG GG  GGGFGGGG
Subjt:  GGGGGLGGGGGFGGGAGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGG--GGGFGG--GGGFGGGG

XP_023540167.1 acanthoscurrin-2-like [Cucurbita pepo subsp. pepo]4.2e-2972.33Show/hide
Query:  MMASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGG
        +MASFSLR  AFCFCLLIALVGANNVED+K  FHRPLG++K +GF GGGLGG                    GGGFGGG GGG+GGGGGLGGGGGLGGGG
Subjt:  MMASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGG

Query:  GLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGGAGGGG
        GLGGGGGF            GHGI+K+GF+ GGLGGGGGLGGGGGLGGGGG+GHGIYKRGFKH   GGGGG   GGGGGLGGGGGLGG    GGG G GG
Subjt:  GLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGGAGGGG

Query:  GLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGG
        G+GGG G G GGG GGGGG GFGGGAGGGGGLGGGGGFGGGGG+GGG GFGGG
Subjt:  GLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGG

TrEMBL top hitse value%identityAlignment
A0A0A0L443 Uncharacterized protein4.3e-3583.02Show/hide
Query:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGG--GGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLG
        MA FSLR V FCFC+LIALV A NNVED KGLFHRPLGFYK  + FRGGGLGG  GGG G GGG GGGGG GGG G G GGG GGG GGGGGLGGGGGLG
Subjt:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGG--GGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLG

Query:  GGGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGG----GGGGGLGGGGGLGGGGGFG
        GGGGLGGGGG GGGGGLGGGGGLGHGIYKRG+KRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFK GGLGGGGGLGG    GGGGGLGGGGGLGGGGG G
Subjt:  GGGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGG----GGGGGLGGGGGLGGGGGFG

Query:  GGA--GGGGGLGGGGGAGFGGGA--GGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG
        GG   GGGGGLGGGGG GFGGG   GGG G G GGG GGG G G GGGFGGGGG GGGGGFGGGG
Subjt:  GGA--GGGGGLGGGGGAGFGGGA--GGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG

A0A1S3AY80 glycine-rich cell wall structural protein-like2.8e-2672.27Show/hide
Query:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG
        MA FSLR V FCFC+LIA VGA NNVED KGLFHRPLGF K  + FRGGGL        GGG+GGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG
Subjt:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG

Query:  GGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGGAGGG
        GGLGGGGG GGGGGLGGGGGLGHGI+KRG+KRGGLGGGGGLGGGGGLGGGGGLG             G GGG GGG GGG GGGGG GGGGGFGG     
Subjt:  GGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGGAGGG

Query:  GGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGGH
                   GGGAGGGG  G GGGA        GGGFGGGGGFGGGGG+GGG H
Subjt:  GGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGGH

A0A5D3CZR6 Glycine-rich cell wall structural protein-like1.2e-3280Show/hide
Query:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG
        MA FSLR V FCFC+LIA VGA NNVED KGLFHRPLGF K  + FRGGGL        GGG+GGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG
Subjt:  MASFSLRVVAFCFCLLIALVGA-NNVEDEKGLFHRPLGFYK--RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGG

Query:  GGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGL--------GGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGG
        GGLGGGGG GGGGGLGGGGGLGHGI+KRG+KRGGLGGGGGLGGGGGL        GGGGGLGHGI KRGFK G LGGGGGL  GGGGGLGGGGGLGGGGG
Subjt:  GGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGL--------GGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGG

Query:  FGGGAGGGGGLGGGGGAGFGGGAGGGGGAG
             GGGGGLGGGGG G GGG GGGGG G
Subjt:  FGGGAGGGGGLGGGGGAGFGGGAGGGGGAG

A0A6J1E8R1 glycine-rich cell wall structural protein-like1.9e-2779.49Show/hide
Query:  MASFSLRVVAFCFCLLIALVGANN-VEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGA--GGGFGGGGGLGGGGGLGG
        MASFSLR VAF  C+ IALVGA+N VED+K LFHRPLGF K RGFRGGG G GGG GGG G G GGGFGGGAGGGFGGGA  GGG GGGGGLGGGGGLGG
Subjt:  MASFSLRVVAFCFCLLIALVGANN-VEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGA--GGGFGGGGGLGGGGGLGG

Query:  GGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGL------GHGIYKRGFKHGGLGGGGGLGG----GGGGGLGGGGGLGG
        GGGLGGGGG GGGGGLGGGGGLGHGIYKRGFK GGLGGGGGLGGGGGLGGGGGL      GHGIYKRGFK GGLGGGGG+GG    GGGGGLGGGGGLGG
Subjt:  GGGLGGGGGFGGGGGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGL------GHGIYKRGFKHGGLGGGGGLGG----GGGGGLGGGGGLGG

Query:  GGGFGGGAGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGG------GGGLGG--GGGFGGGGGFGGGGGFGGG
        GGG GGG G GGG+G G G G GGG GGG G G GGGAGG      GGGLGG  GGGFGGGGG G GGGFGGG
Subjt:  GGGFGGGAGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGG------GGGLGG--GGGFGGGGGFGGGGGFGGG

A0A6J1ELK4 glycine-rich protein 5-like1.0e-2869.5Show/hide
Query:  MASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGGG
        MASFSLR  AFCFCLLIALVGANNVED+K  FHRPLG++K +GF GGGLGGGGGFGGGG                    GGGF                 
Subjt:  MASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYK-RGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGGG

Query:  LGGGGGFGGGGGLGGGGGLGHGIYKRGFKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGG
           GGG+GGGGGLGGGGG GHGI+K+GF+       GGLGGGGGLGGGGGLGGGGG+GHGIYKRGFKH   GGGGG G GGGGG GGGGGLGGGGG GG 
Subjt:  LGGGGGFGGGGGLGGGGGLGHGIYKRGFKR------GGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGG

Query:  AGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG
         GGGGGLGGG G G+GGGAGGG G GFGGGAGGGGGLGGGGGFGGGGG+GGG GFGGGG
Subjt:  AGGGGGLGGGGGAGFGGGAGGGGGAGFGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGCGTCTTTTTCTCTGCGTGTTGTGGCTTTTTGCTTCTGTTTATTGATTGCATTGGTCGGAGCTAACAATGTAGAGGACGAAAAGGGTTTGTTTCACCGCCCGCT
TGGTTTCTATAAGAGAGGGTTTCGCGGCGGCGGTCTCGGCGGCGGTGGAGGTTTTGGCGGTGGCGGAGGCGTCGGTGGTGGTGGAGGCTTCGGCGGCGGAGCTGGCGGTG
GCTTTGGAGGTGGGGCTGGCGGTGGCTTTGGTGGAGGCGGCGGTCTCGGCGGAGGAGGCGGGCTGGGTGGTGGCGGAGGACTTGGAGGCGGCGGCGGGTTTGGCGGTGGC
GGTGGTTTAGGTGGCGGAGGTGGTTTAGGACATGGGATTTATAAAAGGGGTTTTAAACGTGGAGGACTTGGCGGCGGCGGCGGACTTGGCGGAGGAGGTGGTTTGGGTGG
TGGCGGAGGATTAGGGCATGGTATTTACAAGAGGGGTTTTAAGCATGGAGGACTTGGAGGCGGCGGCGGACTTGGCGGCGGTGGAGGAGGAGGTTTAGGAGGCGGTGGTG
GTTTGGGTGGTGGCGGCGGATTCGGAGGAGGAGCAGGCGGAGGAGGAGGCCTTGGCGGCGGCGGTGGAGCAGGTTTCGGCGGAGGAGCAGGTGGAGGAGGAGGGGCAGGA
TTCGGTGGAGGAGCAGGCGGAGGAGGAGGTCTTGGCGGCGGCGGAGGGTTTGGTGGCGGAGGAGGTTTTGGAGGCGGCGGAGGATTTGGCGGCGGCGGCCACCCCTAA
mRNA sequenceShow/hide mRNA sequence
CACTAATGATGGCGTCTTTTTCTCTGCGTGTTGTGGCTTTTTGCTTCTGTTTATTGATTGCATTGGTCGGAGCTAACAATGTAGAGGACGAAAAGGGTTTGTTTCACCGC
CCGCTTGGTTTCTATAAGAGAGGGTTTCGCGGCGGCGGTCTCGGCGGCGGTGGAGGTTTTGGCGGTGGCGGAGGCGTCGGTGGTGGTGGAGGCTTCGGCGGCGGAGCTGG
CGGTGGCTTTGGAGGTGGGGCTGGCGGTGGCTTTGGTGGAGGCGGCGGTCTCGGCGGAGGAGGCGGGCTGGGTGGTGGCGGAGGACTTGGAGGCGGCGGCGGGTTTGGCG
GTGGCGGTGGTTTAGGTGGCGGAGGTGGTTTAGGACATGGGATTTATAAAAGGGGTTTTAAACGTGGAGGACTTGGCGGCGGCGGCGGACTTGGCGGAGGAGGTGGTTTG
GGTGGTGGCGGAGGATTAGGGCATGGTATTTACAAGAGGGGTTTTAAGCATGGAGGACTTGGAGGCGGCGGCGGACTTGGCGGCGGTGGAGGAGGAGGTTTAGGAGGCGG
TGGTGGTTTGGGTGGTGGCGGCGGATTCGGAGGAGGAGCAGGCGGAGGAGGAGGCCTTGGCGGCGGCGGTGGAGCAGGTTTCGGCGGAGGAGCAGGTGGAGGAGGAGGGG
CAGGATTCGGTGGAGGAGCAGGCGGAGGAGGAGGTCTTGGCGGCGGCGGAGGGTTTGGTGGCGGAGGAGGTTTTGGAGGCGGCGGAGGATTTGGCGGCGGCGGCCACCCC
TAAATGCAATATATCTGCAAATATCTATTGCTTAATGTGAATTGTGAAATTAATGTGTCTAAGTTTATCCAAGGACGTACTTTTTATTATTGTTTTCATGTAGGAGTGAT
AATTTTAAATTATGTAATTTGGTCTTCTCAAAAAACAAAAAATTATGTAATTTGGAATTTAATTTAGAAAAATTAAATGATAATCGGAAATTTGTGATTGGAAAA
Protein sequenceShow/hide protein sequence
MMASFSLRVVAFCFCLLIALVGANNVEDEKGLFHRPLGFYKRGFRGGGLGGGGGFGGGGGVGGGGGFGGGAGGGFGGGAGGGFGGGGGLGGGGGLGGGGGLGGGGGFGGG
GGLGGGGGLGHGIYKRGFKRGGLGGGGGLGGGGGLGGGGGLGHGIYKRGFKHGGLGGGGGLGGGGGGGLGGGGGLGGGGGFGGGAGGGGGLGGGGGAGFGGGAGGGGGAG
FGGGAGGGGGLGGGGGFGGGGGFGGGGGFGGGGHP