; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003312 (gene) of Chayote v1 genome

Gene IDSed0003312
OrganismSechium edule (Chayote v1)
Description60S ribosomal protein L35-like
Genome locationLG03:336714..338972
RNA-Seq ExpressionSed0003312
SyntenySed0003312
Gene Ontology termsGO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily
IPR045059 - 60S ribosomal protein L35


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6602348.1 Dirigent protein 25, partial [Cucurbita argyrosperma subsp. sororia]5.0e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL+TERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

XP_022923169.1 60S ribosomal protein L35-like [Cucurbita moschata]5.0e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL+TERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

XP_022941613.1 60S ribosomal protein L35-like [Cucurbita moschata]5.0e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SLLTERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

XP_022990488.1 60S ribosomal protein L35-like [Cucurbita maxima]1.9e-5196.75Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL+TERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

XP_022992073.1 60S ribosomal protein L35-like [Cucurbita maxima]1.1e-5197.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SLLTERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

TrEMBL top hitse value%identityAlignment
A0A6J1E5L3 60S ribosomal protein L35-like2.4e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL+TERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

A0A6J1FSL2 60S ribosomal protein L35-like2.4e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAEL+LLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SLLTERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

A0A6J1JTF2 60S ribosomal protein L35-like9.2e-5296.75Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL+TERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

A0A6J1JVN4 60S ribosomal protein L351.2e-5196.75Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

A0A6J1JY13 60S ribosomal protein L35-like5.4e-5297.56Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQKSKADLL QLKDLKAELSLLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SLLTERQKKKEMYYPLRKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

SwissProt top hitse value%identityAlignment
O80626 60S ribosomal protein L35-29.1e-4987.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

Q9LZ41 60S ribosomal protein L35-43.5e-4886.99Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

Q9M3D2 60S ribosomal protein L35-31.0e-4786.18Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKK+MY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

Q9M5L0 60S ribosomal protein L351.4e-4988.62Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELRQK+KA+LL QLKDLKAEL+LLRVAKVTGGAPNKLSKIKVV+LSIA+VLTVISQKQK ALREAYK KK LPLDLRPKKTRAIRRRLTKHQ 
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

Q9SF53 60S ribosomal protein L35-12.0e-4886.99Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

Arabidopsis top hitse value%identityAlignment
AT2G39390.1 Ribosomal L29 family protein6.5e-5087.8Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSKADL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

AT3G09500.1 Ribosomal L29 family protein1.4e-4986.99Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR+KSK+DL  QLK+LKAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

AT3G55170.1 Ribosomal L29 family protein7.2e-4986.18Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKK+MY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

AT3G55170.2 Ribosomal L29 family protein7.2e-4986.18Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK+DL TQLK+LKAEL+ LRVAKVTGGAPNKLSKIKVV+ SIA+VLTV SQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKK+MY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV

AT5G02610.1 Ribosomal L29 family protein2.5e-4986.99Show/hide
Query:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA
        MARIKVHELR KSK DL  QLK+ KAEL+LLRVAKVTGGAPNKLSKIKVV+ SIA+VLTVISQKQK+ALREAYK KKLLPLDLRPKKTRAIRRRLTKHQA
Subjt:  MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQA

Query:  SLLTERQKKKEMYYPLRKYAIKV
        SL TER+KKKEMY+P+RKYAIKV
Subjt:  SLLTERQKKKEMYYPLRKYAIKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGATTAAGGTTCACGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGACGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGAGTCGCTAAAGTCAC
CGGCGGTGCCCCAAACAAGCTATCCAAAATCAAGGTGGTGAAATTGTCGATCGCTCGAGTGTTGACGGTAATTTCTCAGAAGCAGAAGGCCGCATTGAGGGAAGCTTACA
AGAAGAAGAAGCTTTTGCCTCTCGATCTACGACCAAAGAAGACCAGAGCCATTCGTAGAAGGCTCACCAAGCATCAGGCATCTTTGTTAACTGAGAGACAGAAGAAGAAA
GAGATGTACTATCCATTGAGGAAATATGCGATTAAGGTGTAG
mRNA sequenceShow/hide mRNA sequence
AGACAATCCTTTTCCCGCTCAGGGAAACCCTAGTTTTCACAGTAGCACTTCTTCCACCAGGTTCCAAGGGTTTCGCCAAGGGCGGCGCTGAGTCGAAGAGCACGCGCCAA
GAAATGGCGAGGATTAAGGTTCACGAGTTGAGGCAGAAATCGAAGGCGGATCTGTTGACGCAGCTTAAGGATCTTAAGGCGGAGCTTTCTCTCCTTCGAGTCGCTAAAGT
CACCGGCGGTGCCCCAAACAAGCTATCCAAAATCAAGGTGGTGAAATTGTCGATCGCTCGAGTGTTGACGGTAATTTCTCAGAAGCAGAAGGCCGCATTGAGGGAAGCTT
ACAAGAAGAAGAAGCTTTTGCCTCTCGATCTACGACCAAAGAAGACCAGAGCCATTCGTAGAAGGCTCACCAAGCATCAGGCATCTTTGTTAACTGAGAGACAGAAGAAG
AAAGAGATGTACTATCCATTGAGGAAATATGCGATTAAGGTGTAGTAGTATTTTTTGGTCATTTTATATGCAACGGTAGACCAATTTTGTTGACAAGTTTTGTTTCGCGA
TCTCGATAATTTTATGTTGATACACTTGAGGTTTTATCCCTTTAGCCAAGAAGTTCTATTTTCATCGACAATCATATATTTTCATCCTTTAGCTCTGTTTCCACCCACCA
TGCAATTTATAGTTTGATTGATTCAGTTTTGGTGCCTGAGATAGTGATCAACTTTTCAACTTTTGGAACAAAGAACTAATAACAACTGACATTAGCTTCGACAACTTCAA
CAAAGTTGAAAGCAGGAAATAACTTTAAGATCGGTATATTCACTTTTGTCTTATTCATAACTACTAAACACAGGTATTGAATATTGAAATGTGATAACTAACATAACGTT
GTGATTATCATGTTTAGTATTATTAAGGGTTATGATAATATCCTTCCTATTTTAACACACCACACTTTACACTTTACACTGCTCTCTATCGGATCTAAATGTTTTGTGAA
ATTCTATTTGCAGTTTAGCAGTTAGTATTAGTTGAAACTAACAATTGTTTTGGTATGCGTGTGAATAATTTTTTTATTATTTTTAAGAAAAATATCTATTTGGCCTTTGG
GATATAGTTTCAATCCAACCC
Protein sequenceShow/hide protein sequence
MARIKVHELRQKSKADLLTQLKDLKAELSLLRVAKVTGGAPNKLSKIKVVKLSIARVLTVISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLLTERQKKK
EMYYPLRKYAIKV