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Sed0003354 (gene) of Chayote v1 genome

Gene IDSed0003354
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG11:35930080..35930581
RNA-Seq ExpressionSed0003354
SyntenySed0003354
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAQ90214.1 hypothetical protein KFL_006140040 [Klebsormidium nitens]6.9e-0544.68Show/hide
Query:  VKDDVNDLVPRAE--VEYLAPK-DPKVEYLAPKVEFLGP----EVEYLAPKIES-VEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVESL
        VK  + +  P+ E  +E +APK + KVE +APK+E + P    +VE +APK+ES VE  APKVE  ++ +A KVE       KVE +APKVE +
Subjt:  VKDDVNDLVPRAE--VEYLAPK-DPKVEYLAPKVEFLGP----EVEYLAPKIES-VEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVESL

KAF2343890.1 hypothetical protein FHG87_025354, partial [Trinorchestia longiramus]7.6e-0443.06Show/hide
Query:  EYLAPKD----PKVEYLAPKVEFLGPEVEYLAPKIESVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPK
        +Y+APK     PK +Y APK E++ P+ +Y APK    EY APK E+            EY APK E++APK
Subjt:  EYLAPKD----PKVEYLAPKVEFLGPEVEYLAPKIESVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPK

MBE7497580.1 hypothetical protein [Verrucomicrobiaceae bacterium]2.0e-0432.5Show/hide
Query:  EVEYLAPK----DPKVEYLAPKVEFLGPEVEYLAPKIE----SVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVE
        ++E+  P+     P++E+  P++EF  P++E+ AP+IE     +E+ AP++EF V      V   E+  P++EF  P++E
Subjt:  EVEYLAPK----DPKVEYLAPKVEFLGPEVEYLAPKIE----SVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVE

MBQ5854434.1 cell division FtsZ family protein [Alistipes sp.]1.1e-0546.05Show/hide
Query:  EVEYLAPK----DPKVEYLAPKVEFLGPEVEYLAPKIESVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVE
        E E++ PK    +PKVE + PKVE + P+VE + PK+E VE +   +E  VE +  KVE++E   PKVE + PKVE
Subjt:  EVEYLAPK----DPKVEYLAPKVEFLGPEVEYLAPKIESVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVE

TrEMBL top hitse value%identityAlignment
A0A1Y1IH98 Uncharacterized protein3.3e-0544.68Show/hide
Query:  VKDDVNDLVPRAE--VEYLAPK-DPKVEYLAPKVEFLGP----EVEYLAPKIES-VEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVESL
        VK  + +  P+ E  +E +APK + KVE +APK+E + P    +VE +APK+ES VE  APKVE  ++ +A KVE       KVE +APKVE +
Subjt:  VKDDVNDLVPRAE--VEYLAPK-DPKVEYLAPKVEFLGP----EVEYLAPKIES-VEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVESL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTCCAGAATACCCATTCAAATGGGCCCAACGACGTTAAGGACGACGTTAATGATTTGGTCCCAAGAGCCGAGGTGGAGTACCTTGCACCTAAGGACCCCAAGGT
GGAGTACCTTGCACCTAAGGTGGAGTTCCTAGGTCCCGAGGTGGAGTACCTTGCACCTAAGATAGAGTCAGTAGAGTACCGTGCACCTAAGGTGGAGTTTCATGTGGAGT
TCTTAGCATCCAAGGTGGAGTTGATGGAATACCTTGCACCTAAGGTGGAGTTCCTGGCACCCAAAGTAGAGTCCCTGAAGTTGAGGCTAGGTCCCTTGCACCTGAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTCCAGAATACCCATTCAAATGGGCCCAACGACGTTAAGGACGACGTTAATGATTTGGTCCCAAGAGCCGAGGTGGAGTACCTTGCACCTAAGGACCCCAAGGT
GGAGTACCTTGCACCTAAGGTGGAGTTCCTAGGTCCCGAGGTGGAGTACCTTGCACCTAAGATAGAGTCAGTAGAGTACCGTGCACCTAAGGTGGAGTTTCATGTGGAGT
TCTTAGCATCCAAGGTGGAGTTGATGGAATACCTTGCACCTAAGGTGGAGTTCCTGGCACCCAAAGTAGAGTCCCTGAAGTTGAGGCTAGGTCCCTTGCACCTGAGGTGA
Protein sequenceShow/hide protein sequence
MVFQNTHSNGPNDVKDDVNDLVPRAEVEYLAPKDPKVEYLAPKVEFLGPEVEYLAPKIESVEYRAPKVEFHVEFLASKVELMEYLAPKVEFLAPKVESLKLRLGPLHLR