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Sed0003360 (gene) of Chayote v1 genome

Gene IDSed0003360
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG06:39369599..39371621
RNA-Seq ExpressionSed0003360
SyntenySed0003360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137138.1 uncharacterized protein LOC101207960 [Cucumis sativus]8.3e-4682.14Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME IT SELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACSKCKGVGSTKSGGLFG+NILAD YE+ GKDES+ PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQMS
        RF CPDCCSQ++
Subjt:  RFPCPDCCSQMS
XP_022155031.1 uncharacterized protein LOC111022174 [Momordica charantia]8.3e-4682.73Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME++TASE+AG  VGALLVCATISA ++DAFISSSQRSSLGMCKRCGDLRM+ACSKC+GVGSTK+GGLFGVNILAD YESFG+DES+ PSIPC+ CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQ
        RF CPDCCSQ
Subjt:  RFPCPDCCSQ
XP_022980758.1 uncharacterized protein LOC111480031 [Cucurbita maxima]3.0e-4381.08Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME++TASELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACSKCKGVGSTKSGG+F     A+LYESFGKDE + PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQM
        RFPCPDCCSQM
Subjt:  RFPCPDCCSQM
XP_023528018.1 uncharacterized protein LOC111791062 [Cucurbita pepo subsp. pepo]6.6e-4380.18Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME++TASELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACS+CKGVGSTKSGG+F     A+LYESFGKDE + PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQM
        RFPCPDCCSQM
Subjt:  RFPCPDCCSQM
XP_038901067.1 uncharacterized protein LOC120088085 [Benincasa hispida]6.4e-4683.04Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME IT SELAG  VGALLVCA+ISA ++DAFISSSQR SLGMCKRCGDLRM+ACSKCKGVGS KSGGLFGVNILA+ YESFGKDES+ PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQMS
        RF CPDCCSQM+
Subjt:  RFPCPDCCSQMS
TrEMBL top hitse value%identityAlignment
A0A0A0KZH5 Uncharacterized protein4.0e-4682.14Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME IT SELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACSKCKGVGSTKSGGLFG+NILAD YE+ GKDES+ PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQMS
        RF CPDCCSQ++
Subjt:  RFPCPDCCSQMS
A0A5A7TRM8 Uncharacterized protein3.0e-4178.57Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME IT SELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACSKCKGVGSTKSGGLFG+NILAD YES    ES+ PSIPC  CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQMS
        RF CPDC SQ++
Subjt:  RFPCPDCCSQMS
A0A6J1DQH1 uncharacterized protein LOC1110221744.0e-4682.73Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME++TASE+AG  VGALLVCATISA ++DAFISSSQRSSLGMCKRCGDLRM+ACSKC+GVGSTK+GGLFGVNILAD YESFG+DES+ PSIPC+ CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQ
        RF CPDCCSQ
Subjt:  RFPCPDCCSQ
A0A6J1GXK9 uncharacterized protein LOC1114577494.2e-4380.18Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME++TASELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACS+CKGVGSTKSGG+F     A+LYESFGKDE   PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQM
        RFPCPDCCSQM
Subjt:  RFPCPDCCSQM
A0A6J1J083 uncharacterized protein LOC1114800311.4e-4381.08Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        ME++TASELAG  VGALLVCATISA ++DAFISSSQR SLGMCKRCGDLRM+ACSKCKGVGSTKSGG+F     A+LYESFGKDE + PSIPCT CNA+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDCCSQM
        RFPCPDCCSQM
Subjt:  RFPCPDCCSQM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G15802.1 unknown protein3.2e-2754.21Show/hide
Query:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG
        M+ +T++E+AGL VGALL+ ATI+A KVDAFI++SQR SLGMC++CGDL+ VAC +CKG G+ KSGG FG +           D S+  S+ C +C A+G
Subjt:  MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARG

Query:  RFPCPDC
         FPCP+C
Subjt:  RFPCPDC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATATAACGGCGAGCGAATTGGCCGGCTTGGGAGTGGGAGCGCTGCTCGTTTGTGCCACCATTTCTGCTTCTAAGGTCGACGCTTTCATTTCTTCTTCTCAGCG
CAGTTCCTTGGGGATGTGCAAGAGATGCGGTGATCTGAGAATGGTAGCATGTTCAAAATGCAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGTGTTAACATTC
TTGCTGACCTCTACGAATCTTTTGGCAAAGACGAATCGAGTCCACCGTCTATCCCATGCACAAGCTGCAACGCGAGAGGTCGCTTCCCATGTCCAGATTGCTGCTCTCAA
ATGTCATGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGAAAATATTATTATAGGTTACTGGATATTATGGATCGTTAGTAGTGGAGATAAGGAATCCAATGGAGGATATAACGGCGAGCGAATTGGCCGGCTTGGGAGTGGG
AGCGCTGCTCGTTTGTGCCACCATTTCTGCTTCTAAGGTCGACGCTTTCATTTCTTCTTCTCAGCGCAGTTCCTTGGGGATGTGCAAGAGATGCGGTGATCTGAGAATGG
TAGCATGTTCAAAATGCAAAGGAGTTGGATCAACCAAATCAGGTGGACTGTTTGGTGTTAACATTCTTGCTGACCTCTACGAATCTTTTGGCAAAGACGAATCGAGTCCA
CCGTCTATCCCATGCACAAGCTGCAACGCGAGAGGTCGCTTCCCATGTCCAGATTGCTGCTCTCAAATGTCATGAACTTTTATTGTTGTGTGTTGGGCATGTAGAAATAA
TGAAACTTCCCCATTTCATTCTGATGCTTCTCCATGTTATGGAAATATACCAGTTATAGCCTAATTATATCATCATTTTATCTCCTTTTCTCCTTGCTTTTTCTACCATT
ACCATTTTCCATCAAGGTGTTGAAGAATCTACACAGACTTGAAATTTCACAAATGCAGATATGGTGATGAAGATTTCAACTTTCAACACAGGTTAGATCCGTCTTGGCTT
AGCAGAAAAGAGAGAAGCCAAACCAAAGAATTTTAGTAGCAAGGTTCTTCCAATTGAGAATACTTCATAAAGTTTAATAATATGAATATATGATACGATGTACAGTATAT
TATTTTGTTTAGATGATCTAACTTTCAACTTTTTGTTAGCGTGGGAAATATAGGGGAGAAAAAACTTTGCCCTTTATAATTCAATTAGTGGAGTTGATCAAGATTAGGAA
TGTTTGTAACAAATTGTTCTTTAGCTCAATTGAGATCTCAAAAGGTGATTATGCTCATTG
Protein sequenceShow/hide protein sequence
MEDITASELAGLGVGALLVCATISASKVDAFISSSQRSSLGMCKRCGDLRMVACSKCKGVGSTKSGGLFGVNILADLYESFGKDESSPPSIPCTSCNARGRFPCPDCCSQ
MS