; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003364 (gene) of Chayote v1 genome

Gene IDSed0003364
OrganismSechium edule (Chayote v1)
DescriptionGBBH-like_N domain-containing protein
Genome locationLG06:4131711..4135536
RNA-Seq ExpressionSed0003364
SyntenySed0003364
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR010376 - Gamma-butyrobetaine hydroxylase-like, N-terminal
IPR038492 - GBBH-like, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7017806.1 hypothetical protein SDJN02_19672 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-6490.44Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML  QRA RTIHTTVD+PQI+SFALRAPK VEVKFADG+VFN+SAEFLR+YSPA DAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFT LRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

XP_022154140.1 uncharacterized protein LOC111021468 isoform X1 [Momordica charantia]1.8e-6391.6Show/hide
Query:  RALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYF
        RA RTIHTTV++P+++SFALRAPKFVEVKFADG++FN+SAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYF
Subjt:  RALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYF

Query:  YHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        YHLGSNKFTLLRNYV+TL+KHGLSRDPPRRK
Subjt:  YHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

XP_022935010.1 uncharacterized protein LOC111442002 isoform X1 [Cucurbita moschata]5.7e-6589.71Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML  QRA RTIHTTVD+PQ++SFALRAPK+VEVKFADG+VFN+SAEFLR+YSPA DAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFT LRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

XP_022984013.1 uncharacterized protein LOC111482460 isoform X1 [Cucurbita maxima]7.4e-6590.44Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML   RA RTIHTTVDSPQI+SFALRAPK+VEVKFADG+VFN+SAEFLR+YSPA DAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFT LRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

XP_038891561.1 uncharacterized protein LOC120080945 isoform X1 [Benincasa hispida]3.1e-6387.5Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML  QR  RTIHTT+D+PQI++FALRAPK+VEVKFADG+VFN+SAEFLR+YSPA DAKVRS+GGEKVISGRRHV IMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

TrEMBL top hitse value%identityAlignment
A0A1S3BNF3 uncharacterized protein LOC103491759 isoform X14.9e-6286.76Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML   R  RTIHTT+++PQI++FAL APK+VEVKFADG+VFN+SAEFLRIYSPA DAKVRSIGGEKVI GRRHVGIMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

A0A4U5PZX0 GBBH-like_N domain-containing protein2.1e-5776.47Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML  Q+A+R +HT++D+P+++ F L+APK+VEV++A+G+ FN+SAEFLRI+SPAVD KVRS+GGEKVI GRRHVGIMSAEPVGNYGVR++FDDLHKTGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        +WD+FYHLGSNKFTL+RNY+KTLKKHGLSRDPPRRK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

A0A6J1DIS9 uncharacterized protein LOC111021468 isoform X18.8e-6491.6Show/hide
Query:  RALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYF
        RA RTIHTTV++P+++SFALRAPKFVEVKFADG++FN+SAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYF
Subjt:  RALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYF

Query:  YHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        YHLGSNKFTLLRNYV+TL+KHGLSRDPPRRK
Subjt:  YHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

A0A6J1F9C8 uncharacterized protein LOC111442002 isoform X12.8e-6589.71Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML  QRA RTIHTTVD+PQ++SFALRAPK+VEVKFADG+VFN+SAEFLR+YSPA DAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFT LRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

A0A6J1J9C4 uncharacterized protein LOC111482460 isoform X13.6e-6590.44Show/hide
Query:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY
        ML   RA RTIHTTVDSPQI+SFALRAPK+VEVKFADG+VFN+SAEFLR+YSPA DAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLH+TGIY
Subjt:  MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIY

Query:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK
        SWDYFYHLGSNKFT LRNYVKTLKKHGLSRDPP+RK
Subjt:  SWDYFYHLGSNKFTLLRNYVKTLKKHGLSRDPPRRK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G27340.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 1035 Blast hits to 1035 proteins in 399 species: Archae - 0; Bacteria - 765; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 231 (source: NCBI BLink).9.4e-5070.87Show/hide
Query:  RTIHTT--VDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFY
        R +H T  +  P++S F++ +PK VEV++ADG  FN S+EFLRI+SPA D KVRSIGGEKVISGRR+VGIMSAEPVGNYGVR++FDDLH+TGIY WDYFY
Subjt:  RTIHTT--VDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFY

Query:  HLGSNKFTLLRNYVKTLKKHGLSRDPP
         LGSNKF L+RNY+KTL+KH LSR+PP
Subjt:  HLGSNKFTLLRNYVKTLKKHGLSRDPP

AT3G27340.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 693 Blast hits to 693 proteins in 282 species: Archae - 0; Bacteria - 530; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 124 (source: NCBI BLink).2.5e-2668.67Show/hide
Query:  RTIHTT--VDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRI
        R +H T  +  P++S F++ +PK VEV++ADG  FN S+EFLRI+SPA D KVRSIGGEKVISGRR+VGIMSAEPVGNYGVRI
Subjt:  RTIHTT--VDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRI

AT3G27340.3 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: oxidation reduction; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal (InterPro:IPR010376); Has 945 Blast hits to 945 proteins in 390 species: Archae - 0; Bacteria - 710; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 196 (source: NCBI BLink).2.9e-4366.93Show/hide
Query:  RTIHTT--VDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFY
        R +H T  +  P++S F++ +PK VEV++ADG  FN S+EFLRI+SPA D KVRSIGGEKVISGRR+VGIMSAEPVGNYGVR        TGIY WDYFY
Subjt:  RTIHTT--VDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFY

Query:  HLGSNKFTLLRNYVKTLKKHGLSRDPP
         LGSNKF L+RNY+KTL+KH LSR+PP
Subjt:  HLGSNKFTLLRNYVKTLKKHGLSRDPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGTTTGGCAAAGAGCTTTGCGGACGATCCACACCACCGTCGATTCTCCGCAAATTTCCAGTTTCGCTCTTCGAGCTCCCAAATTTGTAGAGGTTAAATTCGCAGA
TGGAAATGTGTTCAATATGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATGCTAAGGTCCGATCAATTGGGGGTGAAAAGGTAATTTCTGGACGGCGTCACG
TCGGCATCATGTCTGCAGAACCCGTTGGTAACTACGGGGTAAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGATTATTTCTACCATCTGGGTAGC
AACAAATTTACACTCTTGAGAAACTATGTGAAGACATTAAAGAAGCATGGACTGAGCCGAGATCCACCAAGGAGAAAATGA
mRNA sequenceShow/hide mRNA sequence
GTGAGATTATTCATTGAAGCGATGTTGGTTTGGCAAAGAGCTTTGCGGACGATCCACACCACCGTCGATTCTCCGCAAATTTCCAGTTTCGCTCTTCGAGCTCCCAAATT
TGTAGAGGTTAAATTCGCAGATGGAAATGTGTTCAATATGTCAGCTGAATTCTTGAGAATATATAGTCCAGCTGTTGATGCTAAGGTCCGATCAATTGGGGGTGAAAAGG
TAATTTCTGGACGGCGTCACGTCGGCATCATGTCTGCAGAACCCGTTGGTAACTACGGGGTAAGGATACTTTTTGATGACTTGCATAAAACTGGGATTTATTCATGGGAT
TATTTCTACCATCTGGGTAGCAACAAATTTACACTCTTGAGAAACTATGTGAAGACATTAAAGAAGCATGGACTGAGCCGAGATCCACCAAGGAGAAAATGATGGACAAG
TCAACTGGAGATTGGGCATCAAATGTTATATAAGTTACCTAATCGTGGGTGTTTGTCCAGACGAACTTATGAAAATGAAATATTTTCGCATAGAAGACGTAAAACATATA
TTAGACATTCTCGAAATGGAAAATAATTTTCTATAAATTTTGTCAGCTTATAAGTCCCTCCGTGGAACCACTGAATGGAATTCGATATAAGGAAGATAAGCTGTCTCGGC
ACTGGCTGGGGAGAAATGTTCAAATATTGTACATAGCAATAAAAAAAAAAAATTCTAATAAATTCATAACCATTTGATTTTGATTTTTGAAA
Protein sequenceShow/hide protein sequence
MLVWQRALRTIHTTVDSPQISSFALRAPKFVEVKFADGNVFNMSAEFLRIYSPAVDAKVRSIGGEKVISGRRHVGIMSAEPVGNYGVRILFDDLHKTGIYSWDYFYHLGS
NKFTLLRNYVKTLKKHGLSRDPPRRK