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Sed0003372 (gene) of Chayote v1 genome

Gene IDSed0003372
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG10:4807628..4809920
RNA-Seq ExpressionSed0003372
SyntenySed0003372
Gene Ontology termsNA
InterPro domainsIPR027854 - Short transmembrane mitochondrial protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF8379244.1 hypothetical protein HHK36_028676 [Tetracentron sinense]1.7e-1880.7Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MG  RSSFS + GT+CG+YIAQNYNVPNIKKLAN+G+LMAKHIEE YRKPKKRG+DD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
KAF8412996.1 hypothetical protein HHK36_000968 [Tetracentron sinense]4.0e-2085.96Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MG  RSSFS + GTVCG+YIAQNYNVPNIKKLAN+G+LMAKHIEENYRKPKKRGDDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
KAG7034311.1 hypothetical protein SDJN02_04038, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-1884.21Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MG  RS FSLIAGTV GIYIAQNYNVPNI+KLAN+G++MAKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
XP_022132505.1 uncharacterized protein LOC111005345 [Momordica charantia]1.7e-1882.46Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MGF RSSFS IAGTV GIY+AQNYNVPNI+KLAN+G+++AKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
XP_038882745.1 uncharacterized protein LOC120073906 [Benincasa hispida]7.5e-1984.21Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MGF RSSFS IAGTV GIY+AQNYNVPNI+KLAN+G++MAKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
TrEMBL top hitse value%identityAlignment
A0A6J1BSM8 uncharacterized protein LOC1110053458.1e-1982.46Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MGF RSSFS IAGTV GIY+AQNYNVPNI+KLAN+G+++AKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
A0A6J1GCJ7 uncharacterized protein LOC1114529531.4e-1884.21Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MG  RS FSLIAGTV GIYIAQNYNVPNI+KLAN+G++MAKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
A0A6J1HHR2 uncharacterized protein LOC1114636301.4e-1884.21Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MGF RSSFS I GTV GIY+AQNY+VPNI+KLAN+GILMAKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
A0A6J1IPG1 uncharacterized protein LOC1114787631.4e-1884.21Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MG  RS FSLIAGTV GIYIAQNYNVPNI+KLAN+G++MAKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
A0A6J1KVJ8 uncharacterized protein LOC1114968251.4e-1884.21Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
        MGF RSSFS I GTV GIY+AQNY+VPNI+KLAN+GILMAKHIEENYRKPKKR DDD
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G35736.1 unknown protein8.8e-1871.15Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKK
        MG FRS FS I G+V G+Y+AQNYNVPNI+KL N+G+++AKH+EENYRKPKK
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKK
AT2G35736.2 unknown protein8.8e-1871.15Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKK
        MG FRS FS I G+V G+Y+AQNYNVPNI+KL N+G+++AKH+EENYRKPKK
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKK
AT4G25225.1 unknown protein7.5e-1770.91Show/hide
Query:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGD
        MG  RSSFS I GTVCGIYIAQ YNVPNIKKL +  + MAK +EE YRKPK R D
Subjt:  MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTTTTTCAGAAGTAGCTTCTCCTTAATTGCGGGAACTGTGTGTGGGATTTATATCGCTCAAAATTACAACGTTCCCAACATCAAGAAGCTCGCGAATTCTGGGAT
TTTGATGGCCAAACACATCGAAGAGAATTACAGGAAACCGAAGAAGAGGGGAGATGACGATTGA
mRNA sequenceShow/hide mRNA sequence
GGCCCGACCCGCAAATCGAACCGGGTCCTTGCAGAGCAAGAAAGCCTTCAAAACCCCGCACCAATAAAAAAAACAGATCGACGAAGAACACAGAGTGTGGAAGTGATAAA
CCCTAATTAGCAATAGGAGAGATCAAGGGTACAATTCTTTCAAACTGGGTGGATCTGATTCATTTTGTGCCCTAAAATCCCCAATTCCGATTCGTTTTCCAGTTGCCGAT
GGGGTTTTTCAGAAGTAGCTTCTCCTTAATTGCGGGAACTGTGTGTGGGATTTATATCGCTCAAAATTACAACGTTCCCAACATCAAGAAGCTCGCGAATTCTGGGATTT
TGATGGCCAAACACATCGAAGAGAATTACAGGAAACCGAAGAAGAGGGGAGATGACGATTGATTCCAAGATTTACGACCCCCCAGGTCGTAGCCCCCCTGTATTAATGCA
TCAAGGAAGATCATTTGCACGAAACTTTCCTTAACGGAACTAGAAGCTAGAGGTTTTCTC
Protein sequenceShow/hide protein sequence
MGFFRSSFSLIAGTVCGIYIAQNYNVPNIKKLANSGILMAKHIEENYRKPKKRGDDD