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Sed0003384 (gene) of Chayote v1 genome

Gene IDSed0003384
OrganismSechium edule (Chayote v1)
DescriptionPollen preferential protein
Genome locationLG02:41369298..41370462
RNA-Seq ExpressionSed0003384
SyntenySed0003384
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043783.1 uncharacterized protein E6C27_scaffold236G001150 [Cucumis melo var. makuwa]2.1e-5370.51Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSNTIMLRP S  R+  LLASKS S SVRFAEVAGGTTA+CAAVCCCCP VV++  VLA+YKVPAGLCRRA+R++RRQRLKK G +PARRGR S G +D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS
         D +IL+AGKS+YSSE +G+ ++ETER+V+ELE EMW+IFYSTGFWRS S+R+  S
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS

XP_011652052.1 uncharacterized protein LOC105434984 [Cucumis sativus]8.7e-5269.87Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSNTIM RP S  R+  LL SKS S SVRFAEVAGGTTA+CAAVCCCCP VV++  VLA+YKVPAGLCRRA+R++RRQRLKK G  PARRGR S G +D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS
         D +IL+AGK VYSSE +G+ + ETER+V+ELE EMW+IFYSTGFWRS S+RD  S
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS

XP_022955715.1 uncharacterized protein LOC111457605 [Cucurbita moschata]4.5e-4864.56Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSN +M RP   +R+  LL SKS+  S+RFAEVAGGTTA+CAAVCCCCP  V+   VLA+YKVPAGLCRRA+R++RR  L+K G LP+RRGR S  S+D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN
         D +ILT GK++++SELKGK SDETER+V+ELE EMW+ FY TGFWRS SQRD IS +
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN

XP_023539516.1 uncharacterized protein LOC111800159 [Cucurbita pepo subsp. pepo]1.3e-4764.56Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSN +M RP   +R+  LL SKS+  S+RFAEVAGGTTA+CAAVCCCCP  V+   VLA+YKVPAGLCRRA+R++RR  L+K G LPARRGR S  S+D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN
         D +ILT GK++ +SELKGK SDETER+V+ELE EMW+ FY TGFWRS SQRD I+ +
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN

XP_038905288.1 uncharacterized protein LOC120091362 [Benincasa hispida]2.9e-5572.96Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSNTIMLRP S  R+  LL SKSVS SVRFAEVAGGTTA+CAAVCCCCP VV++  VLA+YKVPAGLCRRA+R++RRQRLKK G +PARR R SGG +D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSNS
         D +IL+ GK+VYSSE KG+ S+ETER V+ELE EMW+IFYSTGFWRS SQRD ISS S
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSNS

TrEMBL top hitse value%identityAlignment
A0A0A0LGV0 Uncharacterized protein4.2e-5269.87Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSNTIM RP S  R+  LL SKS S SVRFAEVAGGTTA+CAAVCCCCP VV++  VLA+YKVPAGLCRRA+R++RRQRLKK G  PARRGR S G +D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS
         D +IL+AGK VYSSE +G+ + ETER+V+ELE EMW+IFYSTGFWRS S+RD  S
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS

A0A1S4DUJ2 uncharacterized protein LOC1034867105.3e-4765.38Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSNTIMLRP S  R+  LLASKS S SVRFAEVAGGTTA+CAAVCCCCP VV++  VLA+YKVPAGLCRRA+R++RRQRLKK             G +D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS
         D +IL+AGKS+YSSE +G+ ++ETER+V+ELE EMW+IFYSTGFWRS S+R+  S
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS

A0A5D3DQ13 Uncharacterized protein1.0e-5370.51Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSNTIMLRP S  R+  LLASKS S SVRFAEVAGGTTA+CAAVCCCCP VV++  VLA+YKVPAGLCRRA+R++RRQRLKK G +PARRGR S G +D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS
         D +IL+AGKS+YSSE +G+ ++ETER+V+ELE EMW+IFYSTGFWRS S+R+  S
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHIS

A0A6J1F7R8 uncharacterized protein LOC1114416328.8e-4260Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGEL-PARRGRSSGGSFD
        MSNT+M RPT    +  L+ SKSVS +VRFAEVAGGTTA+CAAV CCCP + V+  +LA+YKVPAGLCRRA+R++ RQ +KK   + PAR GR  GG  D
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGEL-PARRGRSSGGSFD

Query:  DIDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSNS
        D D +++T  K+VY        S+E ER+V+ELE EMWDIFYSTGFWRS SQRD ISS++
Subjt:  DIDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSNS

A0A6J1GVU4 uncharacterized protein LOC1114576052.2e-4864.56Show/hide
Query:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD
        MSN +M RP   +R+  LL SKS+  S+RFAEVAGGTTA+CAAVCCCCP  V+   VLA+YKVPAGLCRRA+R++RR  L+K G LP+RRGR S  S+D+
Subjt:  MSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDD

Query:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN
         D +ILT GK++++SELKGK SDETER+V+ELE EMW+ FY TGFWRS SQRD IS +
Subjt:  IDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G27180.1 unknown protein7.9e-1942.03Show/hide
Query:  RFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRL--KKNGELPARRGRSSGGSF------DDIDFEILTAGKSVYSSELKGK
        +  EVAGG  A+CAAV CCCP  VV++ VLAVYKVPA +C++A R  +R+R   K++G L +     S  +       +D+  EI+     V   EL   
Subjt:  RFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRL--KKNGELPARRGRSSGGSF------DDIDFEILTAGKSVYSSELKGK

Query:  VSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN
               +V+ LENEM D FY  GFWRS SQ+D  S +
Subjt:  VSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSN

AT3G11690.1 unknown protein1.1e-2544.38Show/hide
Query:  SHRRQPHLLASKSVSTSVRF-------AEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELP--ARRGRS--------
        S+RRQP L  S S S S R        AE  GGTTA CAAV CCCP  +V++ VLA+YKVP G+CRRAIRS+RR++L KNG LP     G++        
Subjt:  SHRRQPHLLASKSVSTSVRF-------AEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELP--ARRGRS--------

Query:  --------------SGGSFDDIDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISS
                      S    DD   ++   GKSV +     + +DE +  VL LE EMW+ FY  GFWRS SQR+ +SS
Subjt:  --------------SGGSFDDIDFEILTAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISS

AT5G06380.1 unknown protein2.5e-2046.97Show/hide
Query:  AEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDDIDFEILTAGKSVYSSELKGKVSDETERE--
        AE  GGTTA CAA+C C P  VV++ VLAVYK+P GLCRRAIR  RR+RL K   + + R    GGS          +  +V+  E + +  +E E +  
Subjt:  AEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDDIDFEILTAGKSVYSSELKGKVSDETERE--

Query:  VLELENEMWDIFYSTGFWRSSSQRDHISSNSN
        V+ LE EMW  FYS GFWRS SQ +  SS  N
Subjt:  VLELENEMWDIFYSTGFWRSSSQRDHISSNSN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAACCATGTCGAACACGATCATGCTCCGGCCGACTTCTCACCGCCGCCAACCACACCTGCTCGCCAGCAAATCCGTCTCCACCAGCGTCCGGTTCGCGGAGGT
GGCCGGCGGGACAACCGCCGACTGCGCCGCCGTCTGCTGCTGCTGTCCTTTCGTCGTCGTCGACATCTTCGTGCTCGCCGTCTACAAGGTTCCGGCCGGGCTCTGCCGCC
GCGCCATCAGGTCGCAGCGCCGGCAGAGGCTGAAGAAAAACGGCGAGCTTCCGGCGAGGCGCGGCCGATCCTCCGGCGGCAGCTTCGACGACATCGATTTTGAGATCCTC
ACCGCCGGAAAATCGGTGTACTCGTCGGAACTGAAGGGCAAAGTTTCCGACGAGACGGAGAGGGAAGTTTTGGAGCTGGAAAATGAGATGTGGGACATTTTTTACAGCAC
TGGATTCTGGAGAAGCTCTTCTCAGAGAGATCACATTTCTTCCAACTCGAATTGA
mRNA sequenceShow/hide mRNA sequence
AAACAATTTCCCATTCCGACTTTGACCCTCTGTATGTTCGAAATAAAATGGCTCTCTGTAACGTCTCCACGTTTCTCTCCGTTGTTCAATTCCGTCAACAGAGATTCCTC
ATTTCATGGATCTCAATCAATTTTCATCCACAAAACCAAAAGAATTTCTCATCCATTCTTCACCGGAATTTCTGTTTCCGCCGCCGAAATCTCCGCCGCTCCTCCGTCCT
CTTATTCCCCCCTCCCTCTCCTTCCCCTCCTCGGGGCCTGAGTTGCTATTTTCCGGCAGCTCCACTCCGCCGCCGCCGTGGGAGCAAGGACTCGAGCTCTTGATTCATTT
CTTTGCTCTACGTTCCTTCTCCCACAGGATTGTTCTCGATTCGATTCGATTCGATTTGTTTTGATTTGATTCTGTATTTTTTTTTTTAGGTTTTGTTAGGGCAAAATTTG
GAGAGAGGAGTTAGGGTTTTTCCTAATCGATTTCTGATCGAGTCGAAATTTCTGCTGCGAAACCCTAGCGGAAGATGGATCGAACCATGTCGAACACGATCATGCTCCGG
CCGACTTCTCACCGCCGCCAACCACACCTGCTCGCCAGCAAATCCGTCTCCACCAGCGTCCGGTTCGCGGAGGTGGCCGGCGGGACAACCGCCGACTGCGCCGCCGTCTG
CTGCTGCTGTCCTTTCGTCGTCGTCGACATCTTCGTGCTCGCCGTCTACAAGGTTCCGGCCGGGCTCTGCCGCCGCGCCATCAGGTCGCAGCGCCGGCAGAGGCTGAAGA
AAAACGGCGAGCTTCCGGCGAGGCGCGGCCGATCCTCCGGCGGCAGCTTCGACGACATCGATTTTGAGATCCTCACCGCCGGAAAATCGGTGTACTCGTCGGAACTGAAG
GGCAAAGTTTCCGACGAGACGGAGAGGGAAGTTTTGGAGCTGGAAAATGAGATGTGGGACATTTTTTACAGCACTGGATTCTGGAGAAGCTCTTCTCAGAGAGATCACAT
TTCTTCCAACTCGAATTGAATTCATTTACAGAAATGATTCATTCATTATTGATTGTTTGTGTTCTTCTTTTTTGTTTCATCTCTCTCTGTAAAAGAAAATAATAGGAATC
CAAATATTTGGAAATGCTGGTTTGTTTTTATATTTTGTTGATGTTCAAAGTTCTTTCATCTTTTT
Protein sequenceShow/hide protein sequence
MDRTMSNTIMLRPTSHRRQPHLLASKSVSTSVRFAEVAGGTTADCAAVCCCCPFVVVDIFVLAVYKVPAGLCRRAIRSQRRQRLKKNGELPARRGRSSGGSFDDIDFEIL
TAGKSVYSSELKGKVSDETEREVLELENEMWDIFYSTGFWRSSSQRDHISSNSN