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Sed0003390 (gene) of Chayote v1 genome

Gene IDSed0003390
OrganismSechium edule (Chayote v1)
Descriptionlow-molecular-weight cysteine-rich 48
Genome locationLG04:4522704..4531693
RNA-Seq ExpressionSed0003390
SyntenySed0003390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651697.1 hypothetical protein Csa_006343 [Cucumis sativus]9.7e-1963.01Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        MATQKL+TVSIV++++ AC +S+TKGD+  +NC+RPCSDTY D+SC NDC+RE+  AGFCYP   ++ KDCCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

KAE8651701.1 hypothetical protein Csa_006400, partial [Cucumis sativus]5.4e-0957.14Show/hide
Query:  KGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        KGD+  ++C++PCSDTY D+SC NDC++E+  AGFCYP   ++ KDCCC
Subjt:  KGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

KAG6586428.1 hypothetical protein SDJN03_19161, partial [Cucurbita argyrosperma subsp. sororia]9.4e-1455.41Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYP--DNVTSKKDCCC
        MA++KL TV  +++++F  F SS KGDMF+ CIRPC D + DDSC +DC+R +  AGFCYP   +VT++KDCCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYP--DNVTSKKDCCC

KGN54497.1 hypothetical protein Csa_012842 [Cucumis sativus]9.1e-0944.59Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYP--DNVTSKKDCCC
        M TQKL  VS+++ + F+CF SS +GD   NC+ PCS+  GD  CN  C+ +   AGFC P    ++  K CCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYP--DNVTSKKDCCC

KGN61228.1 hypothetical protein Csa_006463 [Cucumis sativus]4.8e-1860.27Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        MATQKL+T+SIV++++FAC  S+TKGD+  ++C+RPCSDTY D+SC NDC++E+  AGFCYP   ++ KDCCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

TrEMBL top hitse value%identityAlignment
A0A0A0L1R8 Uncharacterized protein4.4e-0944.59Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYP--DNVTSKKDCCC
        M TQKL  VS+++ + F+CF SS +GD   NC+ PCS+  GD  CN  C+ +   AGFC P    ++  K CCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYP--DNVTSKKDCCC

A0A0A0LHG9 Uncharacterized protein2.3e-1860.27Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        MATQKL+T+SIV++++FAC  S+TKGD+  ++C+RPCSDTY D+SC NDC++E+  AGFCYP   ++ KDCCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

A0A0A0LJG5 Uncharacterized protein6.8e-1858.9Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        MATQKL+T+SIV++++F C +S+TKGD+  ++C+RPC DTY D+SC NDC+RE+  AGFCYP   ++ KDCCC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

A0A0A0LKF5 Uncharacterized protein4.0e-1058.82Show/hide
Query:  STKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        + KGD+  ++C+RPCSDTY D+SC NDC+RE+  AGFCYP   ++ KDCCC
Subjt:  STKGDMF-LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

A0A5A7TJH1 Uncharacterized protein2.3e-0540.28Show/hide
Query:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC
        M T+KL  V + I ++ ACF++ ++G    NCIRPCS+TY   SC  DC   +   G C P    S +  CC
Subjt:  MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCC

SwissProt top hitse value%identityAlignment
P82763 Defensin-like protein 514.1e-0443.18Show/hide
Query:  LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCCY
        L C   C+  Y D  CN DCL     AG CY  + +  K CCCY
Subjt:  LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCCY

Arabidopsis top hitse value%identityAlignment
AT3G48231.1 low-molecular-weight cysteine-rich 482.9e-0543.18Show/hide
Query:  LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCCY
        L C   C+  Y D  CN DCL     AG CY  + +  K CCCY
Subjt:  LNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCCY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACCCAGAAGCTTTCTACCGTATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAACAAAAGGAGATATGTTCCTCAATTGCATTCGACCATGTTC
CGACACTTATGGTGACGATTCATGCAATAATGATTGTCTTCGAGAGCATAACGATGCTGGATTTTGTTATCCGGACAATGTTACATCTAAAAAAGATTGTTGTTGTTATA
GTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAACCCAGAAGCTTTCTACCGTATCCATTGTTATTGTACTTGTATTTGCTTGCTTTATTTCATCAACAAAAGGAGATATGTTCCTCAATTGCATTCGACCATGTTC
CGACACTTATGGTGACGATTCATGCAATAATGATTGTCTTCGAGAGCATAACGATGCTGGATTTTGTTATCCGGACAATGTTACATCTAAAAAAGATTGTTGTTGTTATA
GTTAA
Protein sequenceShow/hide protein sequence
MATQKLSTVSIVIVLVFACFISSTKGDMFLNCIRPCSDTYGDDSCNNDCLREHNDAGFCYPDNVTSKKDCCCYS