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Sed0003405 (gene) of Chayote v1 genome

Gene IDSed0003405
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein, putative
Genome locationLG05:22079486..22090242
RNA-Seq ExpressionSed0003405
SyntenySed0003405
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7010668.1 hypothetical protein SDJN02_27463, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-2896.97Show/hide
Query:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRN+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_004145769.1 uncharacterized protein LOC101222012 [Cucumis sativus]6.2e-2894.2Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVA GLIAF SAGLAFPFYMASSKKPVIDP KPL PQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_008465426.1 PREDICTED: uncharacterized protein LOC103503042 [Cucumis melo]7.3e-2995.65Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVA GLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022140323.1 uncharacterized protein LOC111011024 [Momordica charantia]9.6e-2994.2Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+IVATGLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
XP_022944261.1 uncharacterized protein LOC111448766 [Cucurbita moschata]6.2e-2896.97Show/hide
Query:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRN+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
TrEMBL top hitse value%identityAlignment
A0A1S3CQB9 uncharacterized protein LOC1035030423.5e-2995.65Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRNLIVA GLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A565CU39 Uncharacterized protein3.3e-2776.14Show/hide
Query:  HLFCR----FTFKIQILYLMTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        HLF R    F F  Q L  M   RN+IVATGL+ F SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQ Y KK
Subjt:  HLFCR----FTFKIQILYLMTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1CHR8 uncharacterized protein LOC1110110244.6e-2994.2Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        MTRRRN+IVATGLIAF SAGLAFPFYMASSKKPVIDP KPLPPQATFRGPYINTGSRDVGPDHQTY+KK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1FTX8 uncharacterized protein LOC1114487663.0e-2896.97Show/hide
Query:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        RRN+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
A0A6J1JB19 uncharacterized protein LOC1114841578.7e-2895.45Show/hide
Query:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        R+N+IVATGLIAF SAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
Subjt:  RRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G22875.1 unknown protein1.0e-2882.61Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RN++VATGL+ F SAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
AT5G22875.2 unknown protein1.0e-2882.61Show/hide
Query:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK
        M   RN++VATGL+ F SAGLAFPFYMASSK+PVIDP KPLPPQATFRGPYINTGSRDVGPDH+TY KK
Subjt:  MTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCAAAATTTTCACTTATTTTGTAGGTTCACATTCAAAATACAGATATTATACCTGATGACACGTCGTCGGAATCTTATTGTTGCGACTGGATTGATAGCCTTTGT
ATCTGCTGGCTTAGCATTTCCCTTTTACATGGCGTCTTCTAAAAAGCCCGTTATCGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCGTATATAAACA
CTGGTTCCCGAGACGTTGGACCCGACCACCAAACTTACACCAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
TTCTCACGCATCTCTTTCTCAGTCTCTTCGTCTCTTTCTCTGCTGATCTGTTTTTTTTTTTGGACAAAATCTCTGTATTCAAAGAATGAATGAAGTTCTGTGAAACCTAT
TTTCTCTGCTATTCATCTTCGACGGCTCTTAGATAGTAAAAAAGGTACGGCATCTGTAGCACTTCGTTTAGCATTGATTTGGTTTCTGTGGAGCATTTCCCTCTGGTCAA
TTCAAGGTGGTTGGTGCTTTTTCTTGGATAAAGCTCTTTGTAGGTCAAGTTAGCATTATTTTAGTTGTCTGCTTTCCTCTTTCTTTTTTGCTTACTGTCTTGGTTATCTG
TGTTGTTCTCTCTTTTTCCTTTTTGGCTGATGATTTGCATATGAGGCCTTTTTATTGCACCCTTTTAAATCAAATGATCTGTTATTTTTTATAAGTAAAAAAAAGGAAGC
AATTTGCCATTTTGCCAACTTGGTTATTTCTTCCCTGCAGACACATTCCCATTATAAGTACACGAAAATTTACCATATTGTGAGTGATGAAGCAAAATTTTCACTTATTT
TGTAGGTTCACATTCAAAATACAGATATTATACCTGATGACACGTCGTCGGAATCTTATTGTTGCGACTGGATTGATAGCCTTTGTATCTGCTGGCTTAGCATTTCCCTT
TTACATGGCGTCTTCTAAAAAGCCCGTTATCGATCCGGCAAAGCCACTTCCACCGCAGGCCACTTTTCGAGGTCCGTATATAAACACTGGTTCCCGAGACGTTGGACCCG
ACCACCAAACTTACACCAAGAAGTGATTTATTTATTTTTATTGTTGCTTCTTTTTAATAATGTCCACTGGAAGTTAAATGTTAGTTCATTTTTTAAGTAGAAGAAGACTA
CATTAAATTGTCTTTCTTTTATGTTGGTTGTTCATTTTCATATATAAATCTGTGTATTGCTCAACATATATATAAAGCTGTGTAAGAAGAATCCCATATCACATAGACCA
GGAAATATTACTTCAAAGATGCTCATAAGTGAAACCATTCACTGCCTACATGATCGAAATATAGATTATACTAATTCAAC
Protein sequenceShow/hide protein sequence
MKQNFHLFCRFTFKIQILYLMTRRRNLIVATGLIAFVSAGLAFPFYMASSKKPVIDPAKPLPPQATFRGPYINTGSRDVGPDHQTYTKK