CuGenDBv2

Gene ID	Sed0003440
Organism	Sechium edule (Chayote v1)
Description	LysM domain-containing protein
Genome location	LG05:25355961..25359314
RNA-Seq Expression	Sed0003440
Synteny	Sed0003440
Gene Ontology terms	NA
InterPro domains	IPR018392 - LysM domain IPR036779 - LysM domain superfamily IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022153133.1 uncharacterized protein LOC111020702 [Momordica charantia]

5.4e-136

72.32

Show/hide

Query:  MEKGRMNGNGNCDY--------------IYGEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP
        ME+GRMNGNGN D+              +YGE TPNGRS    SQV+S  NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGL+TD QMFALKSL+IPLP
Subjt:  MEKGRMNGNGNCDY--------------IYGEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP

Query:  GRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSD
        GRHPPSPCLL+G  TPG+SSSE+TPS R S DFFESFQSLKL+ S Q +SPAMSSLQ YYGLK SDQKSR   FEM+ + KG  HYLED  +SGT Q SD
Subjt:  GRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSD

Query:  -SLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNEV
          L  HHR SKS  NGF+GEKG +AD+QS E       WN+KLIRRRQKSV DFS SPE +LKDD     NGF SSAGKGFLAQRPK  SRTNLA DNEV
Subjt:  -SLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNEV

Query:  GMIPIPVGLGDSFVAADGFVS-VRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        G+IPIP+GLGDSFVAADGF + VRKSSSTS+LPD EN  TSSIW  S WSLKPDLQAISSASRPIFDGLP PL+GRRNKAALD
Subjt:  GMIPIPVGLGDSFVAADGFVS-VRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

XP_022948795.1 uncharacterized protein LOC111452356 [Cucurbita moschata]

3.0e-134

71.28

Show/hide

Query:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL
        ME+GRMNGNG CDY Y               GE TPNGRS    SQ SSPT+CI+HPVSK DTLAGVAIKYGVEVADI+KMNGL+TD QMFALKSL+IPL
Subjt:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL

Query:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS
        PGRHPPSPCLLE  +TPG+SSSE+TPS R S DFFESFQSLKL+SS Q IS AMSSLQ YYGLK SDQ+SR+  F+ + Y +GA H  ED LVSGTSQD 
Subjt:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS

Query:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE
        D L  HHR S+SS NGFLGEK EVADLQS E        WNDKL+RRRQKSV DFS SPE LLKDD     NGF SSAGKG LAQRPK  SRTNLASDN 
Subjt:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE

Query:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        VG+IPIP+GLGDS+VA DGF  VRKS STS+LPD EN  TSSIW AS WSLKPDLQAIS+AS     GLPKPL+GRRNKAALD
Subjt:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

XP_022998455.1 uncharacterized protein LOC111493082 [Cucurbita maxima]

1.0e-134

71.02

Show/hide

Query:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL
        ME+GRM GNG CDY Y               GE TPNGRS    SQ SSPT+CI+HPVSK DTLAGVAIKYGVEVADI+KMNGL+TD QMFALKSL+IPL
Subjt:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL

Query:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS
        PGRHPPSPCLLE  +TPG+SSSE+TPS R S DFFESF SLKL+SS Q IS AMSSLQ YYGLK SDQ+SRV  F+ + Y +GA H  ED +VSGTSQD 
Subjt:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS

Query:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE
        D L  HHR S+SS NGFLGEK EVADL S E        WNDKL+RRRQKSV DFS SPE LLKDD     NGF SSAGK  LAQRPK  SR NLASDN 
Subjt:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE

Query:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        VG+IPIP+GLGDS+VA DGF  VRKS STS+LPD EN  TSSIW AS WSLKPDLQAIS+ASRP+FDGLPKPL+GRRNKAALD
Subjt:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

XP_023524813.1 uncharacterized protein LOC111788632 [Cucurbita pepo subsp. pepo]

4.9e-137

71.54

Show/hide

Query:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL
        ME+GRMNGNG CDY Y               GE TPNGRS    SQ SSPT+CI+HPVSK DTLAGVAIKYGVEVADI+KMNGL+TD QMFALKSL+IPL
Subjt:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL

Query:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS
        PGRHPPSPCLLE  +TPG+SSSE+TPS R S DFFESFQSLKL+SS Q IS AMSSLQ YYGLK SDQ+SR+  F+ + Y +GA H  ED LVSGTSQ  
Subjt:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS

Query:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE
        D L  HHR S+SS NGFLG+K EVADLQS E        WNDKL+RRRQKSV DFS SPE LLKDD     NGF SSAGKG LAQRPK  SRTNLASDN 
Subjt:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE

Query:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        VG+IPIP+GLGDS+VA DGF  VRKS STS+LPD EN   SSIW AS WSLKPDLQAIS+ASRP+FDGLPKPL+GRRNKAALD
Subjt:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

XP_038906142.1 uncharacterized protein LOC120092022 [Benincasa hispida]

8.4e-137

71.47

Show/hide

Query:  MEKGRMNGNGNCDY--------------IYGEIT----PNGRSSQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP
        ME+GRMNGNGNCDY              +YG+ T     +G++SQV+S +NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGL+TD QMFALKSL+IPLP
Subjt:  MEKGRMNGNGNCDY--------------IYGEIT----PNGRSSQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP

Query:  GRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSD
        GRHPPSPCLLEG NTPG+SSSEKTPS   S +FFESFQSLKL+SS+Q +SPAMSSLQ YYGLK SDQKSR+  FEM+ YR G  HYLEDE VSGT Q SD
Subjt:  GRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSD

Query:  SLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD------NGFPSSAGKGFLAQRPK--SRTNLASDNEV
         LT HHR SKS  NGFLGEKGE  D QS E       W+DKLIRRRQKSV DFS SPE LLKDD      NGF SSAGKG LAQRPK  SRTNLASDNEV
Subjt:  SLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD------NGFPSSAGKGFLAQRPK--SRTNLASDNEV

Query:  GMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        G+IPIP+GLGDSFVAADGF + RKSSSTS+LPD+EN ITSSIW           QAIS+ASRPIFDG PKPL+GRRNKAALD
Subjt:  GMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

TrEMBL top hits

e value

%identity

Alignment

A0A6J1DGQ0 uncharacterized protein LOC111020702

2.6e-136

72.32

Show/hide

Query:  MEKGRMNGNGNCDY--------------IYGEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP
        ME+GRMNGNGN D+              +YGE TPNGRS    SQV+S  NCIVHPVSK DTLAGVAIKYGVEVADIKKMNGL+TD QMFALKSL+IPLP
Subjt:  MEKGRMNGNGNCDY--------------IYGEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP

Query:  GRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSD
        GRHPPSPCLL+G  TPG+SSSE+TPS R S DFFESFQSLKL+ S Q +SPAMSSLQ YYGLK SDQKSR   FEM+ + KG  HYLED  +SGT Q SD
Subjt:  GRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSD

Query:  -SLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNEV
          L  HHR SKS  NGF+GEKG +AD+QS E       WN+KLIRRRQKSV DFS SPE +LKDD     NGF SSAGKGFLAQRPK  SRTNLA DNEV
Subjt:  -SLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNEV

Query:  GMIPIPVGLGDSFVAADGFVS-VRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        G+IPIP+GLGDSFVAADGF + VRKSSSTS+LPD EN  TSSIW  S WSLKPDLQAISSASRPIFDGLP PL+GRRNKAALD
Subjt:  GMIPIPVGLGDSFVAADGFVS-VRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

A0A6J1F865 uncharacterized protein LOC111441757

1.5e-131

70.13

Show/hide

Query:  MEKGRMNGNGNCDY----------------IYGEITP----NGRSSQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIP
        ME+GRMNGNGN D+                +YGE TP     G++SQV+S +NCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGL+TD QMFALKSL+IP
Subjt:  MEKGRMNGNGNCDY----------------IYGEITP----NGRSSQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIP

Query:  LPGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRV-GCFEMSAYRKGALHYLEDELVSGTSQ
        LPGRHPPSPCLLEG NT G+SSSEKTPS R S +FFESFQSLKL+ S Q +SPAMSSLQ YYGLK  DQKS++ G +EM+ Y KG  HYLED  VSGT  
Subjt:  LPGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRV-GCFEMSAYRKGALHYLEDELVSGTSQ

Query:  DSDSLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD------NGFPSSAGKGFLAQRPK--SRTNLASD
          D LT HHR +KS  NGFLGEKG++ DLQS E       WNDKLIRRR KSV DFS +PE LLKDD      NGF S+AGKG LAQRPK  SRTNLASD
Subjt:  DSDSLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD------NGFPSSAGKGFLAQRPK--SRTNLASD

Query:  NEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        N++G+IPIP+GLGDSFVAADGF   RKSSSTS+LPD+EN I SSIW AS WSLKPDLQAIS+ SRPIFDGLP PL+GRRNKAALD
Subjt:  NEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

A0A6J1GAX1 uncharacterized protein LOC111452356

1.4e-134

71.28

Show/hide

Query:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL
        ME+GRMNGNG CDY Y               GE TPNGRS    SQ SSPT+CI+HPVSK DTLAGVAIKYGVEVADI+KMNGL+TD QMFALKSL+IPL
Subjt:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL

Query:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS
        PGRHPPSPCLLE  +TPG+SSSE+TPS R S DFFESFQSLKL+SS Q IS AMSSLQ YYGLK SDQ+SR+  F+ + Y +GA H  ED LVSGTSQD 
Subjt:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS

Query:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE
        D L  HHR S+SS NGFLGEK EVADLQS E        WNDKL+RRRQKSV DFS SPE LLKDD     NGF SSAGKG LAQRPK  SRTNLASDN 
Subjt:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE

Query:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        VG+IPIP+GLGDS+VA DGF  VRKS STS+LPD EN  TSSIW AS WSLKPDLQAIS+AS     GLPKPL+GRRNKAALD
Subjt:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

A0A6J1J3A0 uncharacterized protein LOC111481449

3.9e-132

70.65

Show/hide

Query:  MEKGRMNGNGNCDY----------------IYGEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIP
        ME+GRMNGNGN D+                +YGE TP GRS    SQV+S +NCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGL+TD QMFALKSL+IP
Subjt:  MEKGRMNGNGNCDY----------------IYGEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIP

Query:  LPGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRV-GCFEMSAYRKGALHYLEDELVSGTSQ
        LPGRHPPSPCLLEG NT G+SSSEKTPS R S +FFESFQSLKL+SS Q +SPAMSSLQ YYGLK  DQKS++ G +EM+ Y KG  HYLED  VSGT  
Subjt:  LPGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRV-GCFEMSAYRKGALHYLEDELVSGTSQ

Query:  DSDSLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD------NGFPSSAGKGFLAQRPK--SRTNLASD
          D LT HHR +KS  NGF+GEKG++ DLQS E       WNDKLIRRR KSV DFS +PE LLKDD      NGF S+AGKG LAQRPK  SRTNLASD
Subjt:  DSDSLTDHHRTSKSSANGFLGEKGEVADLQSNE-------WNDKLIRRRQKSVNDFSQSPERLLKDD------NGFPSSAGKGFLAQRPK--SRTNLASD

Query:  NEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        N++G+IPIP+GLGD FVAADGF   RKSSSTS+LPD+EN ITSSIW AS WSLKPDLQAIS+ SRPIFDGLP PL+GRRNKAALD
Subjt:  NEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

A0A6J1KCK3 uncharacterized protein LOC111493082

5.0e-135

71.02

Show/hide

Query:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL
        ME+GRM GNG CDY Y               GE TPNGRS    SQ SSPT+CI+HPVSK DTLAGVAIKYGVEVADI+KMNGL+TD QMFALKSL+IPL
Subjt:  MEKGRMNGNGNCDYIY---------------GEITPNGRS----SQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPL

Query:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS
        PGRHPPSPCLLE  +TPG+SSSE+TPS R S DFFESF SLKL+SS Q IS AMSSLQ YYGLK SDQ+SRV  F+ + Y +GA H  ED +VSGTSQD 
Subjt:  PGRHPPSPCLLEGRNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDS

Query:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE
        D L  HHR S+SS NGFLGEK EVADL S E        WNDKL+RRRQKSV DFS SPE LLKDD     NGF SSAGK  LAQRPK  SR NLASDN 
Subjt:  DSLTDHHRTSKSSANGFLGEKGEVADLQSNE--------WNDKLIRRRQKSVNDFSQSPERLLKDD-----NGFPSSAGKGFLAQRPK--SRTNLASDNE

Query:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        VG+IPIP+GLGDS+VA DGF  VRKS STS+LPD EN  TSSIW AS WSLKPDLQAIS+ASRP+FDGLPKPL+GRRNKAALD
Subjt:  VGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

SwissProt top hits

e value

%identity

Alignment

Q5M836 LysM and putative peptidoglycan-binding domain-containing protein 3

6.7e-04

35.63

Show/hide

Query:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRI-------------PLPGRH----PPSPCLLEGRNTPGRSSSEKTPS
        + + DTL  VA++Y   VADIK++N LI+D   FAL+S++I             PL GR     PP P   E    P   S   + S
Subjt:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRI-------------PLPGRH----PPSPCLLEGRNTPGRSSSEKTPS

Q6P606 LysM and putative peptidoglycan-binding domain-containing protein 4

1.3e-04

36.62

Show/hide

Query:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEGRNTPGRSSSEKTPSD
        +S  D L+ +A++YG +VADIK++N L  +  M+ALKS++IP+      +  + E R    R S +  PS+
Subjt:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEGRNTPGRSSSEKTPSD

Q7Z3D4 LysM and putative peptidoglycan-binding domain-containing protein 3

8.7e-04

39.39

Show/hide

Query:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP--GRHPPSPCLLEGRNTPGRSS
        + + DTL  +A++Y   VADIK++N LI+D   FAL+S++IP+        + C  +GR T   SS
Subjt:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLP--GRHPPSPCLLEGRNTPGRSS

Q99LE3 LysM and putative peptidoglycan-binding domain-containing protein 3

3.9e-04

36.78

Show/hide

Query:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRI-------------PLPGRH----PPSPCLLEGRNTPGRSSSEKTPS
        + + DTL  VA++Y   VADIK++N LI+D   FAL+S++I             PL GRH    PP P   E    P   S   + S
Subjt:  VSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRI-------------PLPGRH----PPSPCLLEGRNTPGRSSSEKTPS

Arabidopsis top hits

e value

%identity

Alignment

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein

4.1e-73

51.05

Show/hide

Query:  IVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEG--RNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSIS
        I H +SKFDTLAGVAIKYGVEVAD+KKMN L+TDLQMFALKSL+IPLPGRHPPSPCL  G   +  G S  E    +    + F+SFQSL+L+SS + +S
Subjt:  IVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEG--RNTPGRSSSEKTPSDRPSLDFFESFQSLKLQSSNQSIS

Query:  PAMSSLQDYYGLKQSDQK-SRVGCFEMSAYRKGALHYLEDELVSGTSQ---DSDSLTDHHRTSKSSANGFLGEKGEVADLQSNE-WNDKLIRRRQKSVND
        PAM SLQ YYGLK +D+  S  GCFEM  Y+    H++ +   +G  +    +++  +HHR S+S  N  + E  +  D  + E  +DK +RRRQKS  D
Subjt:  PAMSSLQDYYGLKQSDQK-SRVGCFEMSAYRKGALHYLEDELVSGTSQ---DSDSLTDHHRTSKSSANGFLGEKGEVADLQSNE-WNDKLIRRRQKSVND

Query:  F-SQSPERLLKDDN-----GFPSSAGKGF-LAQRPKSRTNLASDNEVGMI-PIPVGLGDSFVAADGFVSVRKSSSTSNLPDEE---NSITSSIWGASMWS
        F S++PE +LK++N     GF S AGKG  L  +  SRTNLA+++E G   P+ + L D+ V +D F SVRKSSS S+L D +   N+ + S+W  S WS
Subjt:  F-SQSPERLLKDDN-----GFPSSAGKGF-LAQRPKSRTNLASDNEVGMI-PIPVGLGDSFVAADGFVSVRKSSSTSNLPDEE---NSITSSIWGASMWS

Query:  LKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
        LKPDL   ++ +  IFDGLPKPL+GRRNK ALD
Subjt:  LKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein

9.1e-65

47.43

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Query:  ITPNGRSSQVSSPTNC---IVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEGRNTPGRSSSEKTPSDRPS---
        ITP   SS  SS + C   I H VSKFDTLAG+AIKYGVEVADI K+NGL+TDLQMFAL+SLRIPLPGRHPPSPCL  G    G   SE+  S   +   
Subjt:  ITPNGRSSQVSSPTNC---IVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEGRNTPGRSSSEKTPSDRPS---

Query:  LDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSDSLTDHHRTSKSSANGFLGEKGE---VADLQ
         D F+SFQSL+L  S + ISPAM+SLQ YYGLK  ++++  G F M+ Y+  A    +++        + +   HHR S+S  +  + E  +    +   
Subjt:  LDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSDSLTDHHRTSKSSANGFLGEKGE---VADLQ

Query:  SNEWN--DKLIRRRQKSVNDF-SQSPERLLKDDN-----GFPSSAGKGF-LAQRPKSRTNLASDNEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPD
          E N  DK +RRRQKS  DF S++PE LLK++N      F + AGK   L  +  SR NL+++    +  IP+ L D+ V  D F SVRKS S S+L +
Subjt:  SNEWN--DKLIRRRQKSVNDF-SQSPERLLKDDN-----GFPSSAGKGF-LAQRPKSRTNLASDNEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPD

Query:  EE-NSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD
           NS  SS+W  S W+LKP+L    + +  IFDGLPKPL+GRRNK A+D
Subjt:  EE-NSITSSIWGASMWSLKPDLQAISSASRPIFDGLPKPLSGRRNKAALD

Sequences

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CDS sequence

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ATGGAAAAGGGGCGGATGAATGGGAATGGGAATTGTGATTATATCTATGGGGAAATTACGCCTAATGGAAGAAGCTCGCAGGTTTCATCTCCTACTAATTGTATTGTTCA
TCCGGTTTCTAAATTTGATACTCTTGCTGGAGTGGCCATCAAATATGGTGTTGAGGTTGCAGATATAAAGAAGATGAATGGACTCATCACAGACCTTCAAATGTTTGCTC
TTAAATCTCTCCGGATTCCTCTTCCTGGAAGGCATCCTCCTTCTCCTTGTTTATTGGAAGGCCGAAACACTCCAGGACGAAGCAGCTCCGAAAAGACTCCAAGTGATCGT
CCTTCATTGGATTTCTTCGAATCATTCCAGTCCCTCAAATTGCAGTCTTCCAACCAAAGCATCTCCCCAGCAATGAGCTCCTTACAGGATTACTATGGGCTCAAACAATC
CGATCAAAAAAGCAGAGTTGGCTGTTTTGAAATGTCAGCCTACAGGAAAGGAGCCTTGCATTATTTAGAAGACGAGCTCGTGTCTGGGACCTCACAGGATTCGGATTCAC
TAACGGATCACCATCGAACATCCAAGAGTTCAGCGAATGGATTTCTAGGTGAGAAAGGAGAGGTGGCTGATTTGCAATCTAATGAATGGAATGATAAATTGATAAGAAGG
CGCCAGAAATCTGTAAATGACTTTTCTCAATCCCCTGAAAGGCTCTTGAAAGATGACAATGGGTTTCCATCCTCTGCTGGAAAGGGCTTCTTGGCTCAAAGACCCAAAAG
TAGAACTAATTTAGCAAGCGACAATGAGGTCGGAATGATTCCGATTCCAGTAGGTTTGGGGGATTCGTTTGTGGCTGCTGATGGGTTCGTGTCGGTAAGGAAGTCGTCGA
GCACATCAAATTTGCCAGATGAGGAAAATAGCATCACTTCATCAATCTGGGGTGCTTCCATGTGGAGTTTGAAACCAGATTTACAGGCAATTTCGTCTGCTTCTAGACCA
ATATTTGATGGCTTGCCAAAACCTTTGAGTGGTCGAAGAAACAAAGCTGCACTTGATTAG

mRNA sequence

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Protein sequence

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MEKGRMNGNGNCDYIYGEITPNGRSSQVSSPTNCIVHPVSKFDTLAGVAIKYGVEVADIKKMNGLITDLQMFALKSLRIPLPGRHPPSPCLLEGRNTPGRSSSEKTPSDR
PSLDFFESFQSLKLQSSNQSISPAMSSLQDYYGLKQSDQKSRVGCFEMSAYRKGALHYLEDELVSGTSQDSDSLTDHHRTSKSSANGFLGEKGEVADLQSNEWNDKLIRR
RQKSVNDFSQSPERLLKDDNGFPSSAGKGFLAQRPKSRTNLASDNEVGMIPIPVGLGDSFVAADGFVSVRKSSSTSNLPDEENSITSSIWGASMWSLKPDLQAISSASRP
IFDGLPKPLSGRRNKAALD

Sed0003440 (gene) of Chayote v1 genome