; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0003472 (gene) of Chayote v1 genome

Gene IDSed0003472
OrganismSechium edule (Chayote v1)
DescriptionNuclear transcription factor Y subunit C
Genome locationLG06:2868633..2871990
RNA-Seq ExpressionSed0003472
SyntenySed0003472
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0001228 - DNA-binding transcription activator activity, RNA polymerase II-specific (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0046982 - protein heterodimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136852.1 nuclear transcription factor Y subunit C-2 [Cucumis sativus]5.6e-10882.71Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQL YSNPY+T PM AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD
        SPADLPYYYVPSQHP               NM+GATAQQPR P MPFM WPH Q  QQQQTQQQSD
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD

XP_022157652.1 nuclear transcription factor Y subunit C-2 [Momordica charantia]1.5e-10883.15Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQLPYSNPYET  M AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSDA
        SPADLPYYYVP QHP               NM+G TAQQPRPP MPFM WPH Q  QQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSDA

XP_022927856.1 nuclear transcription factor Y subunit C-2-like [Cucurbita moschata]2.1e-10781.85Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQLPYSNPY+T PM AS  PAITIPPTQQPSSFSNSPHQLA+QQAQHFH     QQQQQLQ+FW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQS---TQQQQTQQQSDA
        SPADLPYYYVPSQHP               NM+GATAQQPRPP +PFM WPH Q+    QQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQS---TQQQQTQQQSDA

XP_022988890.1 nuclear transcription factor Y subunit C-2-like [Cucurbita maxima]7.3e-10882.22Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQLPYSNPY+T PM AS  PAITIPPTQQPSSFSNSPHQLA+QQAQHFH     QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQS---TQQQQTQQQSDA
        SPADLPYYYVPSQHP               NM+GATAQQPRPP +PFM WPH Q+    QQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQS---TQQQQTQQQSDA

XP_038888434.1 nuclear transcription factor Y subunit C-2-like [Benincasa hispida]1.9e-10882.77Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ           VGAGQLPYSNPY+T PM AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSDA
        SPADLPYYYVPSQHP               NM+G TAQQPR P MPFM WPH Q  QQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSDA

TrEMBL top hitse value%identityAlignment
A0A0A0K5U1 Histone domain-containing protein2.7e-10882.71Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQL YSNPY+T PM AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD
        SPADLPYYYVPSQHP               NM+GATAQQPR P MPFM WPH Q  QQQQTQQQSD
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD

A0A1S3C190 nuclear transcription factor Y subunit C-22.7e-10882.71Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQL YSNPY+T PM AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD
        SPADLPYYYVPSQHP               NM+GATAQQPR P MPFM WPH Q  QQQQTQQQSD
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD

A0A5A7SLP2 Nuclear transcription factor Y subunit C-22.7e-10882.71Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQL YSNPY+T PM AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKAS+PVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD
        SPADLPYYYVPSQHP               NM+GATAQQPR P MPFM WPH Q  QQQQTQQQSD
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSD

A0A6J1DV19 nuclear transcription factor Y subunit C-27.1e-10983.15Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQLPYSNPYET  M AS  PAITIPPTQ PSSFSNSPHQLAYQQAQHFHH    QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSDA
        SPADLPYYYVP QHP               NM+G TAQQPRPP MPFM WPH Q  QQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQSDA

A0A6J1JII4 nuclear transcription factor Y subunit C-2-like3.5e-10882.22Show/hide
Query:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFK
        MDQSERSQ          GVGAGQLPYSNPY+T PM AS  PAITIPPTQQPSSFSNSPHQLA+QQAQHFH     QQQQQLQMFW NQMQE EQTTDFK
Subjt:  MDQSERSQ---------CGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFK

Query:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
        NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG
Subjt:  NHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVG

Query:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQS---TQQQQTQQQSDA
        SPADLPYYYVPSQHP               NM+GATAQQPRPP +PFM WPH Q+    QQQQTQQQSDA
Subjt:  SPADLPYYYVPSQHP---------------NMFGATAQQPRPPMMPFMSWPHAQS---TQQQQTQQQSDA

SwissProt top hitse value%identityAlignment
Q655V5 Nuclear transcription factor Y subunit C-42.6e-6059.24Show/hide
Query:  GAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFS--NSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADED
        G+   P   P  T P A + +PA + P    P++    ++ HQL YQQAQ FH     QQQ+QLQ FW  ++ + EQTTDFKNHSLPLARIKKIMKADED
Subjt:  GAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFS--NSPHQLAYQQAQHFH----HQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADED

Query:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY-YYVPSQHPN
        VRMISAEAPVIFAKACE+FILELTLRSW+HTEENKRRTLQKNDIAAAI+RTD++DFLVDI+PRD+LKEEG+G+ +A +P +G PAD  PY YYVP Q   
Subjt:  VRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPAD-LPY-YYVPSQHPN

Query:  MFGAT--AQQPRPPMMPFMSWPHAQSTQQQ-QTQQQSD
          G     QQ  P  +    W   Q  Q++   +QQSD
Subjt:  MFGAT--AQQPRPPMMPFMSWPHAQSTQQQ-QTQQQSD

Q8L4B2 Nuclear transcription factor Y subunit C-96.3e-5454.07Show/hide
Query:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK
        MDQ +  Q    +G + Y +NPY+T PM+ +   A T+      +  +  P QLA+ Q      QQQ  QQLQ FWENQ +E E+TTDFKNHSLPLARIK
Subjt:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY

Query:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS
        +P+      +P M         PP  P+M  P  Q     Q  Q++
Subjt:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS

Q8LCG7 Nuclear transcription factor Y subunit C-22.7e-6579.88Show/hide
Query:  IPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRS
        +PP    S   N+   +A+QQA HFHH    QQQQQLQMFW NQMQE E TTDFKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+
Subjt:  IPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRS

Query:  WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ
        WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Subjt:  WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ

Q9SMP0 Nuclear transcription factor Y subunit C-15.5e-5055.83Show/hide
Query:  AITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSW
        A  IPP    ++ S +    +Y    H   QQQQQLQ+FW  Q QE EQ  DFKNH LPLARIKKIMKADEDVRMISAEAP++FAKACE+FILELT+RSW
Subjt:  AITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRSW

Query:  IHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHP-----NMFGATAQQP-----RPPMMPFMS-W
        +H EENKRRTLQKNDIAAAI+RTD+FDFLVDI+PRDE+K+E   +    + V  + + +PYYY P   P      M G  A  P     +PP   + S W
Subjt:  IHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHP-----NMFGATAQQP-----RPPMMPFMS-W

Query:  PHAQST
          +  T
Subjt:  PHAQST

Q9ZVL3 Nuclear transcription factor Y subunit C-32.1e-4955.96Show/hide
Query:  SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFA
        SNPY+T         A+T  PT        S H   +Q  Q    Q  QQLQ FWE Q +E E+TTDFKNHSLPLARIKKIMKADEDVRMISAEAPV+FA
Subjt:  SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFA

Query:  KACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPS-----QHPNM-FGATAQQP
        +ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG   A      + A  PY Y+P       +P M  G     P
Subjt:  KACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPS-----QHPNM-FGATAQQP

Query:  RPPMMPFMSWPHAQSTQQ
          P M    W      QQ
Subjt:  RPPMMPFMSWPHAQSTQQ

Arabidopsis top hitse value%identityAlignment
AT1G08970.1 nuclear factor Y, subunit C94.5e-5554.07Show/hide
Query:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK
        MDQ +  Q    +G + Y +NPY+T PM+ +   A T+      +  +  P QLA+ Q      QQQ  QQLQ FWENQ +E E+TTDFKNHSLPLARIK
Subjt:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY

Query:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS
        +P+      +P M         PP  P+M  P  Q     Q  Q++
Subjt:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS

AT1G08970.3 nuclear factor Y, subunit C94.5e-5554.07Show/hide
Query:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK
        MDQ +  Q    +G + Y +NPY+T PM+ +   A T+      +  +  P QLA+ Q      QQQ  QQLQ FWENQ +E E+TTDFKNHSLPLARIK
Subjt:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY

Query:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS
        +P+      +P M         PP  P+M  P  Q     Q  Q++
Subjt:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS

AT1G08970.4 nuclear factor Y, subunit C94.5e-5554.07Show/hide
Query:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK
        MDQ +  Q    +G + Y +NPY+T PM+ +   A T+      +  +  P QLA+ Q      QQQ  QQLQ FWENQ +E E+TTDFKNHSLPLARIK
Subjt:  MDQSERSQCGVGAGQLPY-SNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQ--QQLQMFWENQMQEAEQTTDFKNHSLPLARIK

Query:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY
        KIMKADEDVRMISAEAPV+FA+ACEMFILELTLRSW HTEENKRRTLQKNDIAAA++RTD+FDFLVDI+PR++L++E LG I + ++P   + A  PY Y
Subjt:  KIMKADEDVRMISAEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG-ITKASIPVVGSPADLPYYY

Query:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS
        +P+      +P M         PP  P+M  P  Q     Q  Q++
Subjt:  VPS-----QHPNMFGATAQQPRPPMMPFMSWPHAQSTQQQQTQQQS

AT1G56170.1 nuclear factor Y, subunit C21.9e-6679.88Show/hide
Query:  IPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRS
        +PP    S   N+   +A+QQA HFHH    QQQQQLQMFW NQMQE E TTDFKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+
Subjt:  IPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRS

Query:  WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ
        WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Subjt:  WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ

AT1G56170.2 nuclear factor Y, subunit C21.9e-6679.88Show/hide
Query:  IPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRS
        +PP    S   N+   +A+QQA HFHH    QQQQQLQMFW NQMQE E TTDFKNH+LPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLR+
Subjt:  IPPTQQPSSFSNSPHQLAYQQAQHFHH----QQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFAKACEMFILELTLRS

Query:  WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ
        WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLG+TK +IP VVGSP   PYYY+  Q
Subjt:  WIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIP-VVGSPADLPYYYVPSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCAATCAGAGCGTTCTCAGTGCGGTGTCGGTGCCGGACAATTACCGTATTCTAATCCATACGAAACAACGCCAATGGCCGCTTCCGAAATGCCTGCAATTACGAT
TCCCCCGACTCAGCAACCGTCCAGTTTCTCTAATTCTCCACACCAGCTTGCCTATCAGCAGGCTCAGCACTTCCACCACCAGCAGCAACAACAGCTGCAAATGTTTTGGG
AAAACCAAATGCAAGAGGCTGAACAAACAACTGACTTTAAGAACCACAGTCTACCCCTTGCTCGAATCAAGAAAATAATGAAAGCGGATGAAGACGTCCGAATGATTTCA
GCTGAAGCACCCGTTATATTTGCAAAGGCGTGCGAAATGTTCATCTTGGAGTTGACTCTGCGATCTTGGATTCATACCGAAGAGAACAAAAGAAGAACTTTACAAAAGAA
TGATATTGCAGCAGCCATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATCATTCCTAGAGATGAACTAAAAGAGGAAGGACTCGGAATCACGAAAGCCTCGATTC
CCGTAGTTGGTTCCCCTGCCGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGAACATGTTCGGTGCCACTGCTCAACAGCCCCGACCACCAATGATGCCTTTTATG
TCATGGCCACATGCTCAATCGACACAGCAGCAACAAACGCAGCAGCAAAGTGATGCATAG
mRNA sequenceShow/hide mRNA sequence
GGGTTCCATTTTCATGATTGGATAAATATGTGCATATGGAGTCGGAGTGGGAAAAGAAGTATATTTCCTTCACGTGAATGTACATTTGTGGAGGGTTCGTGTATGCGTGT
GGAAAACAGTACCTATTGTGAGCCATGGATCAATCAGAGCGTTCTCAGTGCGGTGTCGGTGCCGGACAATTACCGTATTCTAATCCATACGAAACAACGCCAATGGCCGC
TTCCGAAATGCCTGCAATTACGATTCCCCCGACTCAGCAACCGTCCAGTTTCTCTAATTCTCCACACCAGCTTGCCTATCAGCAGGCTCAGCACTTCCACCACCAGCAGC
AACAACAGCTGCAAATGTTTTGGGAAAACCAAATGCAAGAGGCTGAACAAACAACTGACTTTAAGAACCACAGTCTACCCCTTGCTCGAATCAAGAAAATAATGAAAGCG
GATGAAGACGTCCGAATGATTTCAGCTGAAGCACCCGTTATATTTGCAAAGGCGTGCGAAATGTTCATCTTGGAGTTGACTCTGCGATCTTGGATTCATACCGAAGAGAA
CAAAAGAAGAACTTTACAAAAGAATGATATTGCAGCAGCCATTTCAAGGACTGATGTCTTCGATTTCTTGGTTGATATCATTCCTAGAGATGAACTAAAAGAGGAAGGAC
TCGGAATCACGAAAGCCTCGATTCCCGTAGTTGGTTCCCCTGCCGATCTTCCTTATTACTATGTTCCATCGCAGCATCCGAACATGTTCGGTGCCACTGCTCAACAGCCC
CGACCACCAATGATGCCTTTTATGTCATGGCCACATGCTCAATCGACACAGCAGCAACAAACGCAGCAGCAAAGTGATGCATAGGTAAAAGTAGTATGCGAAATCGAGAC
AGTCGCTGCGATATGATTGGTAGAGGCGATTTCAAGTGATGTTTATTGTGTTAAACTGTCTAGTTTAGTTGACAAAAGAAAGTATAGCTGTAGTAGAGAACTTGTGAATG
ATGATAAGTTGCAGTTGAGTTTGTATGATGAGGGTGTTTTTATCTCTTATTTTATCTATCAATATTATGTACAACAATGTGTGTGAAAGAGGATCCAACTTTGGCAAACT
GTAATCTCTATTTTTCAGGCTGTGTTTGGCCAAGTCTCTCTATAATTGTAAATTTGTTTAATTATCTGAGCTGGGTTAGTGGTGA
Protein sequenceShow/hide protein sequence
MDQSERSQCGVGAGQLPYSNPYETTPMAASEMPAITIPPTQQPSSFSNSPHQLAYQQAQHFHHQQQQQLQMFWENQMQEAEQTTDFKNHSLPLARIKKIMKADEDVRMIS
AEAPVIFAKACEMFILELTLRSWIHTEENKRRTLQKNDIAAAISRTDVFDFLVDIIPRDELKEEGLGITKASIPVVGSPADLPYYYVPSQHPNMFGATAQQPRPPMMPFM
SWPHAQSTQQQQTQQQSDA