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Sed0003477 (gene) of Chayote v1 genome

Gene IDSed0003477
OrganismSechium edule (Chayote v1)
DescriptionDeoxyhypusine synthase
Genome locationLG07:12176693..12177222
RNA-Seq ExpressionSed0003477
SyntenySed0003477
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600517.1 hypothetical protein SDJN03_05750, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2372.73Show/hide
Query:  MGNCVESLSRRREEEETTTT-----REKEEKR-ERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM
        MGNCVE LSRR EEEETTTT      EKEE++   +RIKVVLT+EELQWLMEQ++ERGGK LEELL EIE  RK VN D SWRPSLESIME PEV D M
Subjt:  MGNCVESLSRRREEEETTTT-----REKEEKR-ERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM

KAG7031156.1 hypothetical protein SDJN02_05196, partial [Cucurbita argyrosperma subsp. argyrosperma]4.4e-2473.74Show/hide
Query:  MGNCVESLSRRREEEETTTT-----REKEEKR-ERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM
        MGNCVE LSRR EEEETTTT      EKEE++   +RIKVVLT+EELQWLMEQ++ERGGK LEELL EIE  RK VN D SWRPSLESIME PEVLD M
Subjt:  MGNCVESLSRRREEEETTTT-----REKEEKR-ERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM

KGN53406.1 hypothetical protein Csa_015211 [Cucumis sativus]5.6e-1958.88Show/hide
Query:  MGNCVESLSRRREEEETTTT-----REKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRK-------GVNNDASWRPSLESIMESPE
        MGNCVE LSR+REE+ TTTT      E+ EK+  +RIKVVL +EEL+WL EQI+E+GGK LEELLEEIE+GR+        +  + SW+PSLESIME PE
Subjt:  MGNCVESLSRRREEEETTTT-----REKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRK-------GVNNDASWRPSLESIMESPE

Query:  VLDPMSR
        + D M R
Subjt:  VLDPMSR

XP_022942038.1 uncharacterized protein LOC111447226 [Cucurbita moschata]1.8e-2574.49Show/hide
Query:  MGNCVESLSRRREEEE-----TTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM
        MGNCVE LSRRREEEE     TTT  EKEE++ R+RIKVVLT+EELQWLMEQ++ERGGK LEELL EIE  RK VN D SWRPSLESIME PEV D M
Subjt:  MGNCVESLSRRREEEE-----TTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM

XP_023543788.1 uncharacterized protein LOC111803552 [Cucurbita pepo subsp. pepo]3.4e-2471.43Show/hide
Query:  MGNCVESLSRRREEE-----ETTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM
        MGNCVE LSRRREEE      TTTT EKEE++  +RIKVVLT+EELQWLMEQ++ERGGK LEELL EIE+ R+ V+ D SWRPSLESIME PEV D M
Subjt:  MGNCVESLSRRREEE-----ETTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM

TrEMBL top hitse value%identityAlignment
A0A0A0KZU9 Uncharacterized protein2.7e-1958.88Show/hide
Query:  MGNCVESLSRRREEEETTTT-----REKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRK-------GVNNDASWRPSLESIMESPE
        MGNCVE LSR+REE+ TTTT      E+ EK+  +RIKVVL +EEL+WL EQI+E+GGK LEELLEEIE+GR+        +  + SW+PSLESIME PE
Subjt:  MGNCVESLSRRREEEETTTT-----REKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRK-------GVNNDASWRPSLESIMESPE

Query:  VLDPMSR
        + D M R
Subjt:  VLDPMSR

A0A438J5K9 Uncharacterized protein8.5e-1348.51Show/hide
Query:  MGNCVESLSRRREEEETTTTREK----EEKRER---IRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKG---VNNDASWRPSLESIMESPEVL
        MGNC+E+   R E EE    +EK    EEK+     +R+K+VLT+EEL+W+M Q++++GGK LE++L EIE+GR           W+PSLESIMESPEV+
Subjt:  MGNCVESLSRRREEEETTTTREK----EEKRER---IRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKG---VNNDASWRPSLESIMESPEVL

Query:  D
        +
Subjt:  D

A0A6J1C443 uncharacterized protein LOC1110083084.5e-1452.34Show/hide
Query:  MGNCVESLSRRREEEETTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEE--IEKGRKG----------VNNDASWRPSLESIMESPE
        MGNCVE++ +  E  E     EK+E +  +RIKVVLT+EEL+WLME I ERGG+ LE+LLEE  IE+GR+            N  ASW+PSLESI+E PE
Subjt:  MGNCVESLSRRREEEETTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEE--IEKGRKG----------VNNDASWRPSLESIMESPE

Query:  VLDPMSR
        + D M R
Subjt:  VLDPMSR

A0A6J1FTR3 uncharacterized protein LOC1114472268.7e-2674.49Show/hide
Query:  MGNCVESLSRRREEEE-----TTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM
        MGNCVE LSRRREEEE     TTT  EKEE++ R+RIKVVLT+EELQWLMEQ++ERGGK LEELL EIE  RK VN D SWRPSLESIME PEV D M
Subjt:  MGNCVESLSRRREEEE-----TTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPM

F6HU23 Uncharacterized protein8.5e-1348.51Show/hide
Query:  MGNCVESLSRRREEEETTTTREK----EEKRER---IRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKG---VNNDASWRPSLESIMESPEVL
        MGNC+E+   R E EE    +EK    EEK+     +R+K+VLT+EEL+W+M Q++++GGK LE++L EIE+GR           W+PSLESIMESPEV+
Subjt:  MGNCVESLSRRREEEETTTTREK----EEKRER---IRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKG---VNNDASWRPSLESIMESPEVL

Query:  D
        +
Subjt:  D

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGAATTGTGTGGAATCTTTGTCGAGACGACGAGAAGAAGAAGAGACGACGACGACGAGGGAGAAAGAAGAAAAGAGAGAAAGAATAAGAATCAAAGTAGTGTTGAC
ACAAGAAGAGTTGCAATGGCTAATGGAGCAAATTGAGGAGAGAGGGGGAAAGAGATTAGAAGAATTGTTAGAAGAGATTGAGAAAGGAAGAAAAGGTGTGAATAATGATG
CTTCTTGGAGACCTTCTTTGGAGAGTATTATGGAATCTCCCGAAGTTCTTGATCCCATGTCCAGATAG
mRNA sequenceShow/hide mRNA sequence
ATTTTCATTCCTCTAAACTCTTTGAAAACTCCTTGGAACAACTGCAGACAACGACGGTGGCAATATCATAAAATTGCGTGAAATCGATGGGGAATTGTGTGGAATCTTTG
TCGAGACGACGAGAAGAAGAAGAGACGACGACGACGAGGGAGAAAGAAGAAAAGAGAGAAAGAATAAGAATCAAAGTAGTGTTGACACAAGAAGAGTTGCAATGGCTAAT
GGAGCAAATTGAGGAGAGAGGGGGAAAGAGATTAGAAGAATTGTTAGAAGAGATTGAGAAAGGAAGAAAAGGTGTGAATAATGATGCTTCTTGGAGACCTTCTTTGGAGA
GTATTATGGAATCTCCCGAAGTTCTTGATCCCATGTCCAGATAGATACACGTTTTTTCTTTTTCTACTCTACACTAATTTCTTTTTCTAGTGATGGAAGTCTTGATTCTA
TCGGTTCTTCTTGATAGAATCTGATGAAAGTTTATCAATTTACGTAATTGAATCTATCGGCCTTTATCGATAGAATCTATCAATATGGAT
Protein sequenceShow/hide protein sequence
MGNCVESLSRRREEEETTTTREKEEKRERIRIKVVLTQEELQWLMEQIEERGGKRLEELLEEIEKGRKGVNNDASWRPSLESIMESPEVLDPMSR