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Sed0003488 (gene) of Chayote v1 genome

Gene IDSed0003488
OrganismSechium edule (Chayote v1)
DescriptionClp R domain-containing protein
Genome locationLG03:14936716..14938293
RNA-Seq ExpressionSed0003488
SyntenySed0003488
Gene Ontology termsGO:0005524 - ATP binding (molecular function)
GO:0016887 - ATPase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0055037.1 protein SMAX1-LIKE 7 isoform X1 [Cucumis melo var. makuwa]1.3e-2980.72Show/hide
Query:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  IVGQLK+LVDVHGDKVWLIGAA++YETYLRFV+KFPSIEKDWDL+LLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

XP_008441469.1 PREDICTED: protein SMAX1-LIKE 7 isoform X1 [Cucumis melo]1.3e-2980.72Show/hide
Query:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  IVGQLK+LVDVHGDKVWLIGAA++YETYLRFV+KFPSIEKDWDL+LLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

XP_008441470.1 PREDICTED: protein SMAX1-LIKE 7 isoform X2 [Cucumis melo]1.3e-2980.72Show/hide
Query:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  IVGQLK+LVDVHGDKVWLIGAA++YETYLRFV+KFPSIEKDWDL+LLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

XP_011656414.1 protein SMAX1-LIKE 7 [Cucumis sativus]9.6e-3079.52Show/hide
Query:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  +VGQLK+LVDVHGDKVWLIGAA++YETYL FV+KFPSIEKDWDLHLLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

XP_038885978.1 protein SMAX1-LIKE 7-like, partial [Benincasa hispida]1.5e-3081.93Show/hide
Query:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFV D   DDRA  +VGQLK+LVDVHGDKVWLIGAAA+YETYLRFV+KFPSIEKDWDLHLLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KBM6 Clp R domain-containing protein4.7e-3079.52Show/hide
Query:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  +VGQLK+LVDVHGDKVWLIGAA++YETYL FV+KFPSIEKDWDLHLLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

A0A1S3B3H9 protein SMAX1-LIKE 7 isoform X16.1e-3080.72Show/hide
Query:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  IVGQLK+LVDVHGDKVWLIGAA++YETYLRFV+KFPSIEKDWDL+LLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

A0A1S3B467 protein SMAX1-LIKE 7 isoform X26.1e-3080.72Show/hide
Query:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  IVGQLK+LVDVHGDKVWLIGAA++YETYLRFV+KFPSIEKDWDL+LLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

A0A5D3DME7 Protein SMAX1-LIKE 7 isoform X16.1e-3080.72Show/hide
Query:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        +IV+FGDLKAFVG+   DDRA  IVGQLK+LVDVHGDKVWLIGAA++YETYLRFV+KFPSIEKDWDL+LLP TSL PESYP S
Subjt:  MIVSFGDLKAFVGDG-DDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

A0A6J1BWB8 protein SMAX1-LIKE 81.8e-2979.07Show/hide
Query:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP---ESYPTS
        +IV+FGDLKAFVGD   DDRA  +VGQLK+LVDVHG+KVWLIGAAA+YETYLRFV+KFPSIEKDWDLHLLP TSL P   ESYP S
Subjt:  MIVSFGDLKAFVGDGD-DDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP---ESYPTS

SwissProt top hitse value%identityAlignment
F4IGZ2 Protein SMAX1-LIKE 87.7e-1444.16Show/hide
Query:  MIVSFGDLKAFV-GDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP
        +++ +GDL+ F  G+G+   A +IV ++  L+  HG +VWLIGA  + E Y + + +FP++EKDWDL LL  TSL P
Subjt:  MIVSFGDLKAFV-GDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP

O80875 Protein SMAX1-LIKE 72.5e-1240.96Show/hide
Query:  MIVSFGDLKAFVGD-GDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        M+++ G+LK    D    D     V +L  L+ +H +K+W IG+ ++ ETYL+ + +FP+I+KDW+LHLLP TS +   YP S
Subjt:  MIVSFGDLKAFVGD-GDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

Q2QYW5 Protein DWARF 53-LIKE3.8e-1344.3Show/hide
Query:  MIVSFGDLKAFVGDGD---DDRAGFIVGQLKRLVDVHG--DKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSL
        +I+S GDLK  V D D    +    +V ++ R+++ H    +VW++G +A YETYL F+SKFP ++KDWDL LLP T++
Subjt:  MIVSFGDLKAFVGDGD---DDRAGFIVGQLKRLVDVHG--DKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSL

Q2RBP2 Protein DWARF 532.2e-1344.3Show/hide
Query:  MIVSFGDLKAFVGDGD---DDRAGFIVGQLKRLVDVHG--DKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSL
        +I+S GDLK  V D D    ++   +V ++ R+++ H    +VW++G +A YETYL F+SKFP ++KDWDL LLP T++
Subjt:  MIVSFGDLKAFVGDGD---DDRAGFIVGQLKRLVDVHG--DKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSL

Q9LML2 Protein SMAX1-LIKE 62.8e-0833.72Show/hide
Query:  MIVSFGDLKAFVGDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPES----YPTS
        ++++ G+LK    +  +     +V +L  L+     ++  IG  ++ ETY + + +FP+IEKDWDLH+LP T+ T  S    YP S
Subjt:  MIVSFGDLKAFVGDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPES----YPTS

Arabidopsis top hitse value%identityAlignment
AT1G07200.2 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein2.0e-0933.72Show/hide
Query:  MIVSFGDLKAFVGDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPES----YPTS
        ++++ G+LK    +  +     +V +L  L+     ++  IG  ++ ETY + + +FP+IEKDWDLH+LP T+ T  S    YP S
Subjt:  MIVSFGDLKAFVGDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPES----YPTS

AT2G29970.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein1.8e-1340.96Show/hide
Query:  MIVSFGDLKAFVGD-GDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS
        M+++ G+LK    D    D     V +L  L+ +H +K+W IG+ ++ ETYL+ + +FP+I+KDW+LHLLP TS +   YP S
Subjt:  MIVSFGDLKAFVGD-GDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTS

AT2G40130.1 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein5.5e-1544.16Show/hide
Query:  MIVSFGDLKAFV-GDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP
        +++ +GDL+ F  G+G+   A +IV ++  L+  HG +VWLIGA  + E Y + + +FP++EKDWDL LL  TSL P
Subjt:  MIVSFGDLKAFV-GDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP

AT2G40130.2 Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein5.5e-1544.16Show/hide
Query:  MIVSFGDLKAFV-GDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP
        +++ +GDL+ F  G+G+   A +IV ++  L+  HG +VWLIGA  + E Y + + +FP++EKDWDL LL  TSL P
Subjt:  MIVSFGDLKAFV-GDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGTGAGCTTTGGTGACTTGAAAGCATTTGTTGGCGATGGTGATGATGATCGAGCTGGCTTTATCGTCGGGCAATTGAAAAGGTTGGTGGATGTTCATGGCGATAA
AGTTTGGCTGATTGGCGCTGCTGCAAATTATGAAACTTATTTGAGATTTGTGAGTAAATTTCCTTCCATTGAGAAGGATTGGGATTTGCATCTCTTGCCCACCACTTCTC
TCACACCTGAATCATATCCCACCAGCTGTAAATTTGTTCTCTCTCTTTTGGGAGATGAGCAGTTAACAAAGAAATCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTGTGAGCTTTGGTGACTTGAAAGCATTTGTTGGCGATGGTGATGATGATCGAGCTGGCTTTATCGTCGGGCAATTGAAAAGGTTGGTGGATGTTCATGGCGATAA
AGTTTGGCTGATTGGCGCTGCTGCAAATTATGAAACTTATTTGAGATTTGTGAGTAAATTTCCTTCCATTGAGAAGGATTGGGATTTGCATCTCTTGCCCACCACTTCTC
TCACACCTGAATCATATCCCACCAGCTGTAAATTTGTTCTCTCTCTTTTGGGAGATGAGCAGTTAACAAAGAAATCATAA
Protein sequenceShow/hide protein sequence
MIVSFGDLKAFVGDGDDDRAGFIVGQLKRLVDVHGDKVWLIGAAANYETYLRFVSKFPSIEKDWDLHLLPTTSLTPESYPTSCKFVLSLLGDEQLTKKS